Ggra9478.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9478.t1
Unique NameGgra9478.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length134
Homology
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BLAST of Ggra9478.t1 vs. uniprot
Match: A0A2V3J596 (TBCC domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J596_9FLOR)

HSP 1 Score: 140 bits (354), Expect = 3.010e-36
Identity = 72/118 (61.02%), Postives = 91/118 (77.12%), Query Frame = 0 
Query:    1 MEALETNAPEAFLGCNDLEKLAPDRQLNYRCLLTHVPDLLAFLQLHALATITRRFRGEPDAVWPDANQGIAP-STSVPTSPLPLRAEVGSRAPSPGMQPVSMTQTSSPRESQAPAPLS 117
            +EALETNAP+AF+ CN+ E LAP RQLNYRCL   VP+LLAFL+LHA ATI  RFR + DAVWPDA+Q I   S S PTSP+P+ ++ GSR  S  +Q +S++QTSSPR S +P+P+S
Sbjct:   89 IEALETNAPDAFVKCNNPENLAPGRQLNYRCLRIPVPELLAFLRLHAAATIASRFREQADAVWPDADQAIVQQSGSAPTSPMPVMSDAGSRTQSQALQSLSLSQTSSPRASPSPSPVS 206
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BLAST of Ggra9478.t1 vs. uniprot
Match: R7QPE1 (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE1_CHOCR)

HSP 1 Score: 92.8 bits (229), Expect = 2.410e-19
Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 0 
Query:    1 MEALETNAPEAFLGCNDLEKLAPDRQLNYRCLLTHVPDLLAFLQLHALATITRRFRGEPDAVWPDANQG---IAP----STSVPTSPLPLRAEVGSRAPSP 94
            +EALETNAP+AF+ CND  KLAP RQ++YR LL  VP+LLAF++LHA AT++ RFR   DAVWP+A  G   ++P    S + P++P   R   GS   SP
Sbjct:   85 IEALETNAPDAFVRCNDPSKLAPGRQVSYRQLLIPVPELLAFVKLHAAATLSSRFRETADAVWPEAEGGSGSVSPVGGVSAACPSNPTNAR-HTGSPLASP 184
The following BLAST results are available for this feature:
BLAST of Ggra9478.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5963.010e-3661.02TBCC domain-containing protein 1 n=1 Tax=Gracilari... [more]
R7QPE12.410e-1952.48C-CAP/cofactor C-like domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:17179..17580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9478.t1Ggra9478.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 17179..17580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9478.t1 ID=Ggra9478.t1|Name=Ggra9478.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MEALETNAPEAFLGCNDLEKLAPDRQLNYRCLLTHVPDLLAFLQLHALAT
ITRRFRGEPDAVWPDANQGIAPSTSVPTSPLPLRAEVGSRAPSPGMQPVS
MTQTSSPRESQAPAPLSDWCRQQPDLLLLSTHG*
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