Ggra9478.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9478.t1
Unique NameGgra9478.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length134
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:17179..17580 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9478Ggra9478Gracilaria gracilis GNS1m malegenetig00000873_pilon 17179..17580 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9478.t1.stop1Ggra9478.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000873_pilon 17179..17181 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9478.t1.CDS1Ggra9478.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000873_pilon 17179..17580 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9478.t1.exon1Ggra9478.t1.exon1Gracilaria gracilis GNS1m maleexontig00000873_pilon 17179..17580 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9478.t1.start1Ggra9478.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000873_pilon 17578..17580 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9478.t1Ggra9478.t1Gracilaria gracilis GNS1m malepolypeptidetig00000873_pilon 17179..17580 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9478.t1 ID=Ggra9478.t1|Name=Ggra9478.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=134bp
MEALETNAPEAFLGCNDLEKLAPDRQLNYRCLLTHVPDLLAFLQLHALAT
ITRRFRGEPDAVWPDANQGIAPSTSVPTSPLPLRAEVGSRAPSPGMQPVS
MTQTSSPRESQAPAPLSDWCRQQPDLLLLSTHG*
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spliced messenger RNA

>Ggra9478.t1 ID=Ggra9478.t1|Name=Ggra9478.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=402bp|location=Sequence derived from alignment at tig00000873_pilon:17179..17580- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGCTTTGGAAACCAACGCACCAGAGGCGTTCTTGGGGTGCAACGA
TCTTGAAAAGCTTGCGCCTGATCGCCAATTGAACTATCGATGCCTTCTCA
CTCATGTACCTGACTTACTTGCGTTCTTACAGTTACATGCGCTTGCAACT
ATCACAAGGCGCTTCAGAGGGGAACCTGATGCTGTCTGGCCGGACGCTAA
TCAAGGAATCGCACCGTCAACATCTGTACCTACTTCTCCACTGCCTCTTA
GAGCTGAGGTAGGATCAAGAGCGCCATCTCCGGGCATGCAGCCAGTCTCC
ATGACACAGACATCATCACCTCGCGAATCCCAGGCTCCTGCTCCGCTTTC
GGATTGGTGTCGGCAGCAGCCGGATCTTTTGCTCCTTTCGACGCACGGAT
GA
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protein sequence of Ggra9478.t1

>Ggra9478.t1 ID=Ggra9478.t1|Name=Ggra9478.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MEALETNAPEAFLGCNDLEKLAPDRQLNYRCLLTHVPDLLAFLQLHALAT
ITRRFRGEPDAVWPDANQGIAPSTSVPTSPLPLRAEVGSRAPSPGMQPVS
MTQTSSPRESQAPAPLSDWCRQQPDLLLLSTHG*
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mRNA from alignment at tig00000873_pilon:17179..17580-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9478.t1 ID=Ggra9478.t1|Name=Ggra9478.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=402bp|location=Sequence derived from alignment at tig00000873_pilon:17179..17580- (Gracilaria gracilis GNS1m male)
ATGGAGGCTTTGGAAACCAACGCACCAGAGGCGTTCTTGGGGTGCAACGA
TCTTGAAAAGCTTGCGCCTGATCGCCAATTGAACTATCGATGCCTTCTCA
CTCATGTACCTGACTTACTTGCGTTCTTACAGTTACATGCGCTTGCAACT
ATCACAAGGCGCTTCAGAGGGGAACCTGATGCTGTCTGGCCGGACGCTAA
TCAAGGAATCGCACCGTCAACATCTGTACCTACTTCTCCACTGCCTCTTA
GAGCTGAGGTAGGATCAAGAGCGCCATCTCCGGGCATGCAGCCAGTCTCC
ATGACACAGACATCATCACCTCGCGAATCCCAGGCTCCTGCTCCGCTTTC
GGATTGGTGTCGGCAGCAGCCGGATCTTTTGCTCCTTTCGACGCACGGAT
GA
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Coding sequence (CDS) from alignment at tig00000873_pilon:17179..17580-

>Ggra9478.t1 ID=Ggra9478.t1|Name=Ggra9478.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=402bp|location=Sequence derived from alignment at tig00000873_pilon:17179..17580- (Gracilaria gracilis GNS1m male)
ATGGAGGCTTTGGAAACCAACGCACCAGAGGCGTTCTTGGGGTGCAACGA
TCTTGAAAAGCTTGCGCCTGATCGCCAATTGAACTATCGATGCCTTCTCA
CTCATGTACCTGACTTACTTGCGTTCTTACAGTTACATGCGCTTGCAACT
ATCACAAGGCGCTTCAGAGGGGAACCTGATGCTGTCTGGCCGGACGCTAA
TCAAGGAATCGCACCGTCAACATCTGTACCTACTTCTCCACTGCCTCTTA
GAGCTGAGGTAGGATCAAGAGCGCCATCTCCGGGCATGCAGCCAGTCTCC
ATGACACAGACATCATCACCTCGCGAATCCCAGGCTCCTGCTCCGCTTTC
GGATTGGTGTCGGCAGCAGCCGGATCTTTTGCTCCTTTCGACGCACGGAT
GA
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