Ggra945.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra945.t1
Unique NameGgra945.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
BLAST of Ggra945.t1 vs. uniprot
Match: A0A2V3IRN1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRN1_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 8.280e-27
Identity = 73/212 (34.43%), Postives = 113/212 (53.30%), Query Frame = 0
Query:    7 LLIFFLMLSSCSGSPSAASQEEHNCFKLIPTLP-QPTPRNNSLTSLEEVLLLSCIKARPNKTITVYEAQTSLELDQTKCSAKPAFSYVNGEVVTIIIEEIDSVLECNEGFCVIVAHNASTLLFSTPQQPTFDITSNTNVTAFSTQLPFDPSPFLSTYAQILLNLFVGGVFDELAIRRILFLQIVESTCMFRRSTVVAGPFETPCGQMEIRYR 217
            L++F L+++  +GSPS    E  +C  +    P Q TP    L   EE+L+  C   R N +I+V+EA++ L+  + +C+ K  F+YVNG      +  I    ECN   C IVA + ST+  S    PT  +TS+T      T L FD +  +S YA  +L+LF  GVFD+L +RR LFL   +S+C  + + ++  PF      + ++ R
Sbjct:   13 LVLFVLLVTRAAGSPS----ESEDCVTVQAAQPLQSTPPQLKLQ--EELLVFICFDVRSNGSISVFEAKSGLKTGKVQCTNKLIFNYVNGARSNKTVANIRFARECNTLLCAIVAASGSTVYISVALPPTVMVTSSTVFEFARTDLSFDATSMVSQYAVRVLDLFTSGVFDDLTVRRALFLFSTQSSCEIQENLLLRIPFRRSHEDLNLQIR 218          
BLAST of Ggra945.t1 vs. uniprot
Match: A0A2V3IKH4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH4_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 3.690e-25
Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 0
Query:   42 TPRN---NSLTSLEEVLLLSCIKARPNKTITVYEAQTSLELDQTKCSAKPAFSYVNGEVVTIIIEEIDSVLECNEGFCVIVAHNASTLLFSTPQQPTFDITSNTNVTAFSTQLPFDPSPFLSTYAQILLNLFVGGVFDELAIRRILFLQIVESTC 193
            TPR    +   + EEVLL +C   +PN  ITVYEA++S + ++ +C  + AF Y NG  V I ++      ECN+ FCV+V+   + + F+ P Q +F+ ++   V    T+LP D    LS YA+ LL L+V G+ DELAIRRIL L++ +  C
Sbjct:   41 TPRTILKDETAAWEEVLLFTCFNVQPNTLITVYEAKSSEDRNKIQCGDRWAFRYENGLHVNISLKWNPIEKECNDSFCVVVSRKGTKMYFTGPLQISFNQSNPDQVIGLETELPTDSVLPLSDYAKALLKLYVSGILDELAIRRILLLKLTQKPC 195          
The following BLAST results are available for this feature:
BLAST of Ggra945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRN18.280e-2734.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKH43.690e-2540.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:898139..898795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra945.t1Ggra945.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 898139..898795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra945.t1 ID=Ggra945.t1|Name=Ggra945.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MAFLSALLIFFLMLSSCSGSPSAASQEEHNCFKLIPTLPQPTPRNNSLTS
LEEVLLLSCIKARPNKTITVYEAQTSLELDQTKCSAKPAFSYVNGEVVTI
IIEEIDSVLECNEGFCVIVAHNASTLLFSTPQQPTFDITSNTNVTAFSTQ
LPFDPSPFLSTYAQILLNLFVGGVFDELAIRRILFLQIVESTCMFRRSTV
VAGPFETPCGQMEIRYRS*
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