Ggra9400.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9400.t1
Unique NameGgra9400.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length133
Homology
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BLAST of Ggra9400.t1 vs. uniprot
Match: A0A2V3ISR3 (DUF2470 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR3_9FLOR)

HSP 1 Score: 197 bits (502), Expect = 1.230e-62
Identity = 102/136 (75.00%), Postives = 115/136 (84.56%), Query Frame = 0 
Query:    1 MSSISRPSSKQ-VPVPNLDDSDHSPVQD---VPSVPEVAAISATVCEFMNKEHVRDIANYIVKFGHRFDDFSQLTAVKMTTLDAAGFTADVVSCDESSCVCVQERFTWPLGLCHNAADVITALKHLSTLCGLPADF 132
            MSS SRP++K+ VPV     +  +  Q    VP VPEVAAISATVCEFMNKEHVRDIANYI+KFG++FDDFSQL+AVKMT LDAAGFTADVVSC++S CVCVQER  WP+GLCHNAA+VITALKHLS LCGLPADF
Sbjct:   32 MSSASRPAAKRIVPVDPPAVAVAAAEQRHAAVPDVPEVAAISATVCEFMNKEHVRDIANYIIKFGNKFDDFSQLSAVKMTALDAAGFTADVVSCEDSHCVCVQERLQWPMGLCHNAAEVITALKHLSALCGLPADF 167
The following BLAST results are available for this feature:
BLAST of Ggra9400.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISR31.230e-6275.00DUF2470 domain-containing protein n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037119Haem oxygenase HugZ-like superfamilyGENE3D3.20.180.10coord: 39..121
e-value: 4.4E-6
score: 28.6
IPR019595Domain of unknown function DUF2470PFAMPF10615DUF2470coord: 38..92
e-value: 3.2E-5
score: 24.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:357824..358305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9400.t1Ggra9400.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 357824..358305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9400.t1 ID=Ggra9400.t1|Name=Ggra9400.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MSSISRPSSKQVPVPNLDDSDHSPVQDVPSVPEVAAISATVCEFMNKEHV
RDIANYIVKFGHRFDDFSQLTAVKMTTLDAAGFTADVVSCDESSCVCVQE
RFTWPLGLCHNAADVITALKHLSTLCGLPADF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037119Haem_oxidase_HugZ-like_sf
IPR019595DUF2470