Ggra9398.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9398.t1
Unique NameGgra9398.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length133
Homology
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BLAST of Ggra9398.t1 vs. uniprot
Match: A0A1X6P2E4 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2E4_PORUM)

HSP 1 Score: 83.2 bits (204), Expect = 6.740e-18
Identity = 38/112 (33.93%), Postives = 72/112 (64.29%), Query Frame = 0 
Query:   18 NPAAYLIKVRLSTGLQLPCYVIPSDTIQDVRNRIEREHGVQPDVYLEGK-MVKPPILAKWNERWIPVNPDATMQMIGL--QKQLRFADITDKLSKVRKFANVHWAASNFFVI 126
            +P A+ + + LSTG ++  + +P+DT   ++ ++E +HG QP V ++G+ MV P +L K+   W       T+    L  + ++++ DITD+L+++++F+N+HWAASN  V+
Sbjct:   15 SPDAFQLSISLSTGQRVKVWAVPNDTPPKLQRKVEAKHGAQPLVAVKGQGMVPPALLIKYERNWYYWEAGLTVAQAQLTSESEVKYQDITDQLAELKRFSNIHWAASNGAVL 126
The following BLAST results are available for this feature:
BLAST of Ggra9398.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6P2E46.740e-1833.93Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 24..60
e-value: 3.20989E-4
score: 34.8794
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 7..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:351087..351485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9398.t1Ggra9398.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 351087..351485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9398.t1 ID=Ggra9398.t1|Name=Ggra9398.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MGCLPSKPETVGANLQQNPAAYLIKVRLSTGLQLPCYVIPSDTIQDVRNR
IEREHGVQPDVYLEGKMVKPPILAKWNERWIPVNPDATMQMIGLQKQLRF
ADITDKLSKVRKFANVHWAASNFFVIATSGDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf