Ggra9368.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9368.t1
Unique Name	Ggra9368.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	441

Homology

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BLAST of Ggra9368.t1 vs. uniprot
Match: A0A2V3IVA7 (N-lysine methyltransferase SETD6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA7_9FLOR)

HSP 1 Score: 307 bits (786), Expect = 2.200e-94
Identity = 163/397 (41.06%), Postives = 239/397 (60.20%), Query Frame = 0

Query:   10 MANIYNPVLLDNPLSISLSQLQNNIRVCQKESGYYLPIDILQCFTTGCKPKPNVRKPQITSEQCEHKLLVQIGYLITRIANEHNSDWGTQGGIFLEKGRVDEDMLDLMATEFPVWFRKLPTVTVLLFFAYVFAAQLFISMEMNRQSRSFAQVLRESDEQDLWCHVVESVKQFLSERIPLSQTEISQQEQHIILPFLEQHVEHGVTSDLHASVQLLNDLNKIFPLSCALHSESSDNIREIWRVECHDMDATPKLRQFSTREWKWLLFETPLRDWIHALRRLYRERNDDVHTLITTYEACNTVCNRKQKSGMEWHGYKEDDGCNMLRPVRLQSDMLLIWTELIALTKPFTTAAFAKTRSDLCAALRAHLGALVDGALLLSTVFHDCGTRFIEGAHVIWR 406
            +A IY+  L D  L+IS   L+  ++ CQ+ESGY++P+DILQCFTTGCKP+ +        +Q E+++L+ +GY++TR++     +W   G  F ++     D++DL+    P+WF KLP +++L FFAYV AAQ  ++  +  ++      LR++DE+DLW  V ESV +F+  RI  +Q E                   G   DL  S+ LL+DLNK+ P S  L+  +   ++E WRVE HD+D +  L+ F  REWKWLLFE     WI ALRRL   R DDVHTL+T+ E CN +   K K G+EWHG+++++   +LRPVRLQSD++ IW  L A +KP    +    R+D   AL A + A+V+  LL++ +F D G RFI+GA  +WR
Sbjct:   18 LAGIYDRTLSDRLLAISTFDLKKKLQTCQRESGYHMPLDILQCFTTGCKPRDSC------VDQSENRMLLHVGYVLTRLSGSQRGEWLNAGMRFADEMDSSADVMDLVDEHLPMWFAKLPVISLLTFFAYVCAAQQLVNRNVRGENVHVNSFLRQADEKDLWKDVRESVYKFVKARI--AQCE-------------------GDVRDLEESLALLDDLNKMLPFSVVLNDVARMGVKEAWRVESHDLDGSNCLKCFERREWKWLLFEVRHDRWIDALRRLSDSRCDDVHTLVTSTEVCNAIGRHKAKGGLEWHGFRDNETV-LLRPVRLQSDVMRIWEALYACSKPIVGRSGGGGRND---ALMAGVEAVVEQLLLMAALFADGGERFIDGARALWR 383

The following BLAST results are available for this feature:

BLAST of Ggra9368.t1 vs. uniprot

BLAST of Ggra9368.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IVA7	2.200e-94	41.06	N-lysine methyltransferase SETD6 n=1 Tax=Gracilari...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 148..440
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..127
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 128..147
None	No IPR available	TMHMM	TMhelix		coord: 123..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000883_pilon	contig	tig00000883_pilon:108403..109725 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9368.t1	Ggra9368.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000883_pilon 108403..109725 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9368.t1 ID=Ggra9368.t1|Name=Ggra9368.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=441bp
MCDDNLAVSMANIYNPVLLDNPLSISLSQLQNNIRVCQKESGYYLPIDIL
QCFTTGCKPKPNVRKPQITSEQCEHKLLVQIGYLITRIANEHNSDWGTQG
GIFLEKGRVDEDMLDLMATEFPVWFRKLPTVTVLLFFAYVFAAQLFISME
MNRQSRSFAQVLRESDEQDLWCHVVESVKQFLSERIPLSQTEISQQEQHI
ILPFLEQHVEHGVTSDLHASVQLLNDLNKIFPLSCALHSESSDNIREIWR
VECHDMDATPKLRQFSTREWKWLLFETPLRDWIHALRRLYRERNDDVHTL
ITTYEACNTVCNRKQKSGMEWHGYKEDDGCNMLRPVRLQSDMLLIWTELI
ALTKPFTTAAFAKTRSDLCAALRAHLGALVDGALLLSTVFHDCGTRFIEG
AHVIWRQSNNGTTCQNRDCASCARAMPGSPGSGVSEEGEA*