Ggra9353.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9353.t1
Unique NameGgra9353.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length176
Homology
BLAST of Ggra9353.t1 vs. uniprot
Match: A0A2V3IV38 (Protein CURVATURE THYLAKOID 1A, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV38_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 4.230e-53
Identity = 110/179 (61.45%), Postives = 131/179 (73.18%), Query Frame = 0
Query:   11 ELAFVSSLPPP-SALSARASSFVTSSRLSL---PRVPIRPMPMLTMTAGNSEDT----------VSTTPPVSITDTSSMEYSLDTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEFLGRARPQ 175
             LAFV  L  P S   A +SS    S L L   P   IR      MTAG+ ED+          V++T P SI++ +  EYS+DT++LK++A  VV DVSERPL+Y QIVAY++AALIALTVLRAV+SAVDSIP+LPGLLEL+GLSYTVWFFWRYV+FKESRQELLDE+EEFLGRARPQ
Sbjct:    2 SLAFVPVLARPRSFFFASSSSSFVHSTLPLHIAPTQSIRRARFAKMTAGSPEDSTTVQTPSSPSVNSTIPSSISENA--EYSIDTDMLKQRAMDVVGDVSERPLYYGQIVAYASAALIALTVLRAVVSAVDSIPLLPGLLELVGLSYTVWFFWRYVIFKESRQELLDEIEEFLGRARPQ 178          
BLAST of Ggra9353.t1 vs. uniprot
Match: A0A1X6P8V0 (CAAD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8V0_PORUM)

HSP 1 Score: 94.7 bits (234), Expect = 3.800e-21
Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   79 LDTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEFLGRAR 173
            +DT  L  KAK V  DV+ RP +Y+ +   +   L+A  V  AV+SA+D IPVLP  LELIGL+YT WF +R++L +E+R+EL +EV++FLG++R
Sbjct:   98 VDTAALVAKAKAVADDVAARPGYYSSVAGVAGGGLVAFVVASAVVSALDKIPVLPSALELIGLAYTSWFVYRFLLQEETREELKEEVQDFLGKSR 192          
BLAST of Ggra9353.t1 vs. uniprot
Match: M2XYK7 (CAAD domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYK7_GALSU)

HSP 1 Score: 87.8 bits (216), Expect = 1.810e-18
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 0
Query:   80 DTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEFLGRA 172
            D      K + V  D+  RP+FY Q++A +   +IA+ +L AV+ A+D +P+LP + EL+GL Y+ WF WRY LF  SRQEL  +++ F+G+A
Sbjct:   97 DPTKFNSKVQDVAQDILNRPVFYAQLLAATVGIIIAIDILDAVVIALDRLPLLPSIFELVGLGYSGWFIWRYALFSGSRQELKSKLDSFIGKA 189          
BLAST of Ggra9353.t1 vs. uniprot
Match: A0A1X6NX15 (CAAD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NX15_PORUM)

HSP 1 Score: 81.6 bits (200), Expect = 3.270e-16
Identity = 36/94 (38.30%), Postives = 64/94 (68.09%), Query Frame = 0
Query:   80 DTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEFLGRAR 173
            D + +  +A+++ +DV +RP +Y  +  Y+    +   VL AV+ A+D +PV+P +L+LIGL+YT WF +RY+L +E+R+EL   +E+ +G+ R
Sbjct:   89 DPDAVAARARKLAADVQDRPGYYASVAGYATGGFVLFVVLSAVVGALDRLPVIPSMLQLIGLTYTGWFTYRYLLQEETREELKVIIEDLIGKTR 182          
BLAST of Ggra9353.t1 vs. uniprot
Match: A0A2Z7C0H8 (Protein CURVATURE THYLAKOID 1A, chloroplastic n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7C0H8_9LAMI)

HSP 1 Score: 77.4 bits (189), Expect = 8.220e-15
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 0
Query:   32 VTSSRLSLPRVPIRPMPMLTMTAGNSEDTVSTTPPVSITDTSSMEYSLDTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEF 168
            VT+       +P+RP   L+ TA         +P + +  TSS E SLD   L    K+    +  +P     ++ Y   A++A+ +   V+SAV+S+P+LP ++EL+GL YT WF +RY+LFK SR+EL  ++EEF
Sbjct:   21 VTNRAAVFSPLPVRPS--LSSTAFKQLKEKGRSPQLMVKATSSEESSLDASELFTDLKEKWDGIENKPT----VLLYGGGAIVAVWLASIVVSAVNSVPLLPKIMELVGLGYTGWFVYRYLLFKTSRKELETDIEEF 151          
BLAST of Ggra9353.t1 vs. uniprot
Match: M2Y342 (CAAD domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y342_GALSU)

HSP 1 Score: 73.9 bits (180), Expect = 3.180e-13
Identity = 39/106 (36.79%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   66 PVSITDTSSMEYSLDTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEFLGR 171
            PVS +++S    SLD+  +KE + +++SDVS RP +Y QI   +   +I L ++ ++  +++ IP+LP LLEL+G+ YT +F WRYV + E+R E+   +   + +
Sbjct:   79 PVS-SESSRKNISLDSTKIKEYSSKLLSDVSSRPAYYGQIALATLVGIICLQIIGSIEESLNHIPILPSLLELVGIVYTAFFAWRYVSYPETRSEVEKTLRNIVSK 183          
BLAST of Ggra9353.t1 vs. uniprot
Match: A9TE40 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TE40_PHYPA)

HSP 1 Score: 72.0 bits (175), Expect = 4.330e-13
Identity = 32/69 (46.38%), Postives = 51/69 (73.91%), Query Frame = 0
Query:  103 TQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEEFLGR 171
            T +  Y+  AL+ L +   ++ A++S+P+LP ++ELIGL YT WF +RY+LFK SR+EL+D++EE  G+
Sbjct:   46 TTVAIYAGGALVTLWLSSIIVGAINSVPLLPKVMELIGLGYTGWFVYRYLLFKSSRKELVDDIEELKGK 114          
BLAST of Ggra9353.t1 vs. uniprot
Match: A0A2I0IEK8 (protein CURVATURE THYLAKOID 1D, chloroplastic n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IEK8_PUNGR)

HSP 1 Score: 73.9 bits (180), Expect = 4.840e-13
Identity = 33/60 (55.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:  108 YSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVEE 167
            Y + AL+AL +  AV+ A+DSIP+LP LLE++GL YTVWF WRY++FK++R+E L ++ E
Sbjct:  141 YGSGALVALWLASAVVGAIDSIPLLPKLLEVVGLGYTVWFTWRYLIFKKNREEFLAKISE 200          
BLAST of Ggra9353.t1 vs. uniprot
Match: protein CURVATURE THYLAKOID 1A, chloroplastic-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E55294 (protein CURVATURE THYLAKOID 1A, chloroplastic-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E55294)

HSP 1 Score: 72.8 bits (177), Expect = 5.250e-13
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   78 SLDTEVLKEKAKQVVSDVSERPLFYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVE 166
            S+ TE L    KQ    +  +P  +     Y   A++AL +   +ISA++S+P+LP L+ELIGL YT WF +RY+LFK SR+EL +++E
Sbjct:   69 SIQTEELLADLKQKWDSIENKPTVFV----YGGGAIVALWLSSIIISAINSVPLLPKLMELIGLGYTGWFVYRYLLFKSSRKELAEDIE 153          
BLAST of Ggra9353.t1 vs. uniprot
Match: A0A3L6RRY3 (Protein CURVATURE THYLAKOID 1A, chloroplastic-like n=2 Tax=Panicum TaxID=4539 RepID=A0A3L6RRY3_PANMI)

HSP 1 Score: 72.4 bits (176), Expect = 5.540e-13
Identity = 30/64 (46.88%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  103 TQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWRYVLFKESRQELLDEVE 166
            T ++ Y+  A++AL +   ++ A++S+P+LP ++EL+GL YT WF +RY+LFKESR+EL D++E
Sbjct:   77 TTVITYAGGAIVALWLTSVIVGAINSVPLLPNIMELVGLGYTGWFVYRYLLFKESRKELADDIE 140          
The following BLAST results are available for this feature:
BLAST of Ggra9353.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV384.230e-5361.45Protein CURVATURE THYLAKOID 1A, chloroplastic n=1 ... [more]
A0A1X6P8V03.800e-2149.47CAAD domain-containing protein n=1 Tax=Porphyra um... [more]
M2XYK71.810e-1843.01CAAD domain-containing protein n=1 Tax=Galdieria s... [more]
A0A1X6NX153.270e-1638.30CAAD domain-containing protein n=1 Tax=Porphyra um... [more]
A0A2Z7C0H88.220e-1536.50Protein CURVATURE THYLAKOID 1A, chloroplastic n=1 ... [more]
M2Y3423.180e-1336.79CAAD domain-containing protein n=1 Tax=Galdieria s... [more]
A9TE404.330e-1346.38Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A2I0IEK84.840e-1355.00protein CURVATURE THYLAKOID 1D, chloroplastic n=1 ... [more]
protein CURVATURE THYLAKOID 1A, chloroplastic-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E552945.250e-1342.70protein CURVATURE THYLAKOID 1A, chloroplastic-like... [more]
A0A3L6RRY35.540e-1346.88Protein CURVATURE THYLAKOID 1A, chloroplastic-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 103..168
e-value: 6.5E-23
score: 80.4
IPR033344Protein CURVATURE THYLAKOID 1PANTHERPTHR33222FAMILY NOT NAMEDcoord: 16..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..128
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
NoneNo IPR availableTMHMMTMhelixcoord: 100..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:64182..64709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9353.t1Ggra9353.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 64182..64709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9353.t1 ID=Ggra9353.t1|Name=Ggra9353.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bp
MLLRAHSRLSELAFVSSLPPPSALSARASSFVTSSRLSLPRVPIRPMPML
TMTAGNSEDTVSTTPPVSITDTSSMEYSLDTEVLKEKAKQVVSDVSERPL
FYTQIVAYSAAALIALTVLRAVISAVDSIPVLPGLLELIGLSYTVWFFWR
YVLFKESRQELLDEVEEFLGRARPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025564CAAD_dom
IPR033344CURT1