Ggra9352.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9352.t1
Unique NameGgra9352.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length688
Homology
BLAST of Ggra9352.t1 vs. uniprot
Match: A0A2V3IV88 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV88_9FLOR)

HSP 1 Score: 623 bits (1606), Expect = 6.340e-213
Identity = 334/716 (46.65%), Postives = 449/716 (62.71%), Query Frame = 0
Query:    8 ALSRKLPSVAKRQRTLTVAPDGRVFLATDASVSALHCAAALSLCXXXXXXXXXXXXPHYRPLYSARGVSAPALAHQFVCVNHQPPWRKDTLLNFTDVVSLAVLQCGFLAVVFADGALHVFAARVDHHYEGGWGGAWAAWHHFPVLLAPAFDLKSICTAAVLIPST----SVP--CHILVVARASGVYIYDEHDLNAARDAPIPPLACLSTEWSNVLHTCDTVPVA-GPQSITLVAVAHEHGRLALHAVSADESAQRLLQHSLLWQTDLSAPITSLSFSANSARKATLALAVAVGNDLILVEWGDGCAIHHQQWQHPIVSRVKQAHQSLLSAAHVMADGSVLSAGTDGTLLRWSIHATRGQQSELAPSVPNSVLVEQQQDAVEPIMAAMPTVNGFCMLVLTTNFRSRTEVGEPSKGNIRKYLGSGRRSSISLLRLPMTEDVSALDEAIGNCVKRFLSATWMGRGISMWDVELFLGGHDNEKSGLTQKLLNRYEWLLEIHNYVENGKENDMERHPIWLRIQRARVLLWFGRIILRSGMTNVDEIDRLNNVVASLRKYLLCMHFDMCISHVLLHGD---CVKKFTEMDLKSFESMCEFVAVCSSLTCDSAAMQQRVVEARELLADRVSDEWCSGTICPVCECEDEQNMLIAEREEMTAFSC----------------------------TQAVRHEFSWIDRANKCALCQCDLVAANVE 685
            AL RKLP+V  R RTL VA DGRVFL+T  S+SALH   AL+              P    L++ R    PA+AH  V        RKDT L+ +DV SL +L   FLAVV ADG LH+   R     +G WGG W AW + P  +A   DLK++C+  +   S+    + P    +LVVARASGVY+Y    L  A  A + P   L+ +WS V+  CDTV V   P+ +T++AVAHEHG LA+++  A E     ++  LLW   L API+SLSF ++S+R + L+L VAVGNDL+LVEWG G  +   QW  P+V+RV+QAHQSL SA  ++ADG+V+SA TDG LL+W I +T     + A ++  SV+VEQQ DA EPIM+A  T+NG  + V+TT+ RSRTEVGEPSKGNIRKYLGSGRRSSISL  LPM ++V A+D AIG C+ RFLS  W+GR I+MWDV+ F+   D EK+GLT +L  R+  + E+H   E+G + D+  HP WLR QRA VLL    II RSG+++VD I++L+ +   LRK+LLCMH+D CI   L   D    ++ F++++ KS ESMCEFV++CSS+ C++  MQ RV+E RE L + ++    + T+CP+CECED  + L+A+ EE+  F C                             +AV+ +F WID  NKCALC C++VA++VE
Sbjct:   16 ALCRKLPAVTNRLRTLLVAADGRVFLSTPHSISALHSTPALN-----KSIAPSDLHPLQSALFTPRSTHPPAVAHHLVFSPSSSTSRKDTSLHLSDVTSLTLLHDAFLAVVVADGTLHLIECRTRFSRDGDWGGLWGAWPNRPAPIAAPSDLKAVCSTRLFTASSEHQQTYPSVAEVLVVARASGVYLYHVQGLLDAHFAHVAPHHRLTDKWSAVIACCDTVRVTYNPEYLTVIAVAHEHGHLAVYSSHAMEHVNAPIKSELLWTVSLQAPISSLSFCSHSSRSSALSLLVAVGNDLVLVEWGIGSVVDRNQWHEPLVTRVEQAHQSLASAVQLVADGTVVSAATDGCLLQWHIEST-AHDVQTARNMQCSVVVEQQPDAAEPIMSATTTLNGLGVFVVTTSLRSRTEVGEPSKGNIRKYLGSGRRSSISLFMLPMRDNVDAIDTAIGKCIDRFLSPAWIGRPINMWDVQEFVSHVDTEKNGLTLRLYQRFSRMYEMHERTESGGDMDLNTHPRWLRQQRAMVLLKLCSIITRSGLSDVDAIEQLSMIGVKLRKFLLCMHYDNCIRLALQRDDKDKSMQSFSDLENKSLESMCEFVSICSSMNCEATQMQARVIEVRERLQNWMATGGSAHTLCPICECEDVHSPLVADEEELMLFFCESRELFVRCVKSGLPCLDVVPLQCVGCEARAVQEQFGWIDSRNKCALCNCEMVASSVE 725          
The following BLAST results are available for this feature:
BLAST of Ggra9352.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IV886.340e-21346.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 104..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:61955..64102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9352.t1Ggra9352.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 61955..64102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9352.t1 ID=Ggra9352.t1|Name=Ggra9352.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=688bp
MRDGCHEALSRKLPSVAKRQRTLTVAPDGRVFLATDASVSALHCAAALSL
CAAPLHRSHSPFHPHYRPLYSARGVSAPALAHQFVCVNHQPPWRKDTLLN
FTDVVSLAVLQCGFLAVVFADGALHVFAARVDHHYEGGWGGAWAAWHHFP
VLLAPAFDLKSICTAAVLIPSTSVPCHILVVARASGVYIYDEHDLNAARD
APIPPLACLSTEWSNVLHTCDTVPVAGPQSITLVAVAHEHGRLALHAVSA
DESAQRLLQHSLLWQTDLSAPITSLSFSANSARKATLALAVAVGNDLILV
EWGDGCAIHHQQWQHPIVSRVKQAHQSLLSAAHVMADGSVLSAGTDGTLL
RWSIHATRGQQSELAPSVPNSVLVEQQQDAVEPIMAAMPTVNGFCMLVLT
TNFRSRTEVGEPSKGNIRKYLGSGRRSSISLLRLPMTEDVSALDEAIGNC
VKRFLSATWMGRGISMWDVELFLGGHDNEKSGLTQKLLNRYEWLLEIHNY
VENGKENDMERHPIWLRIQRARVLLWFGRIILRSGMTNVDEIDRLNNVVA
SLRKYLLCMHFDMCISHVLLHGDCVKKFTEMDLKSFESMCEFVAVCSSLT
CDSAAMQQRVVEARELLADRVSDEWCSGTICPVCECEDEQNMLIAEREEM
TAFSCTQAVRHEFSWIDRANKCALCQCDLVAANVECV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf