Ggra9341.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9341.t1
Unique NameGgra9341.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Homology
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BLAST of Ggra9341.t1 vs. uniprot
Match: A0A2V3IQ15 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ15_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 3.910e-24
Identity = 56/191 (29.32%), Postives = 109/191 (57.07%), Query Frame = 0 
Query:   22 RRRSPHAAHSPLAAKLDLDSAFFWLLLAFLLTAFTFLSLRDTHLSLNTAQLAEYERRSQFLSNSTVYIVEVGRPEALLNVLSKHDWKRISADIDLVAFVWDDL-PVFLTDGWVHAAETILKPTVPHANISLVLFQCGCVLPASYFTLVEHRLAGFECVLLPGWVLDASHVHWLDVQ-EGDACKRRDAVLKS 210
            R RS     S L+ ++   +    L+   ++TA  + ++R   + L+  QL+ +ER+   L N ++Y+   G  + ++  L +++W+++++ ID VAFV+D++  + L   WV A   +L+ + P+    +VLF CGC++P   F   E R  G+EC++LPG+V+    VH+ ++  +   C++R+ + KS
Sbjct:    6 RTRSRKNLSSSLSKRIANAAPVLSLVTVIVVTAVYYTAIRSHDVELSFDQLSAFERQVTTLGNRSIYVCSGGNAKDMIYSLHRYEWEKVASKIDFVAFVYDEVYRMRLNSAWVEAVAGLLRESKPN-GYGVVLFSCGCIIPNVVFQRTEVRFGGYECMMLPGFVMSHEFVHFEELAAQRTPCRKRERITKS 195
The following BLAST results are available for this feature:
BLAST of Ggra9341.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ153.910e-2429.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..252
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availableTMHMMTMhelixcoord: 41..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:35568..36326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9341.t1Ggra9341.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 35568..36326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9341.t1 ID=Ggra9341.t1|Name=Ggra9341.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MAGKSKRPPRANSSSSPTPGARRRSPHAAHSPLAAKLDLDSAFFWLLLAF
LLTAFTFLSLRDTHLSLNTAQLAEYERRSQFLSNSTVYIVEVGRPEALLN
VLSKHDWKRISADIDLVAFVWDDLPVFLTDGWVHAAETILKPTVPHANIS
LVLFQCGCVLPASYFTLVEHRLAGFECVLLPGWVLDASHVHWLDVQEGDA
CKRRDAVLKSRLARRYRAELSEIHRIVVDHNERVEREAANGTAVEKELTN
DR*
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