Ggra9340.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9340.t1
Unique NameGgra9340.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length289
Homology
BLAST of Ggra9340.t1 vs. uniprot
Match: R7QBR7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBR7_CHOCR)

HSP 1 Score: 146 bits (368), Expect = 3.710e-39
Identity = 83/202 (41.09%), Postives = 122/202 (60.40%), Query Frame = 0
Query:   87 TVSKQQEEAVYVVESSRTGYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLNQTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARDYWSEYETKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDAGDVLA--GTGEGIPTDDNDDGDLEVIEL 286
            T+ +Q  + V+ + +S  GYGRLT  G+SV RG SARL F+++  A+SAE L   DS F  +LN+ ER+ YR   SSY GGL + FL  +G N+  +V++ SM+ AR     Y+ K++ AR I+E    + +RITG L A G   IPT A A ++ AR+ L D S L+VV++ A D++A     + +P  D +    EV +L
Sbjct:   37 TLVRQGGDPVFALNNSVVGYGRLTDVGISVNRGASARLRFNVEVNAISAERLENSDSTFESSLNEEERQSYRSRKSSYSGGLGVSFLGVLGANINKRVTKESMEFARSLDVNYDQKSTLARKILEDVVESRVRITGELLATGVDLIPTVATARVRTARITLADNSRLSVVSSTADDLVALDSNNDPLPVSDKE---YEVFDL 235          
BLAST of Ggra9340.t1 vs. uniprot
Match: R7QSG9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSG9_CHOCR)

HSP 1 Score: 143 bits (361), Expect = 3.760e-38
Identity = 83/210 (39.52%), Postives = 123/210 (58.57%), Query Frame = 0
Query:   61 LDGANKRRVGAHINVLADFSARVSVPTVSKQQEEAVYVVESSRTGYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLNQTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARDYWSEYETKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDAGDVLAGTGEG 270
            L GA  RR+   +NV+ +      VP +++Q E + + V  + TG+GR+TR GVSV RG +A L FD+   A+ AET+ +  S FV TL   ER  +  L S++ G LN+P    +G+N    +S   +  A      +ETK+S    I+ES   + +RITG+L+A G S IPT A+AFI+++ V   DGS L VV+++  DV+A   EG
Sbjct:   18 LAGAAPRRI---VNVVKNL-----VP-ITRQSETSEFAVTETTTGFGRITRVGVSVVRGANATLNFDVTVTAIDAETINSMSSSFVETLTAEERVQFEELVSNFDGSLNLPIFELLGLNFAESISTEQIAEAARSIENFETKSSAVEEILESVVDSRIRITGTLSATGQSNIPTVAFAFIELSTVTFDDGSDLVVVSSNPSDVVAADSEG 218          
BLAST of Ggra9340.t1 vs. uniprot
Match: R7Q637 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q637_CHOCR)

HSP 1 Score: 141 bits (355), Expect = 6.640e-37
Identity = 79/208 (37.98%), Postives = 123/208 (59.13%), Query Frame = 0
Query:   70 GAHINVLADFSARVSVPTVSKQQEEAVYVVESSRTGYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLNQTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARDYWSEYETKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDAGDVLAGT--GEGIPTDD 275
            G  +N++ +F     +P    + E + +   SS +G GR+TR G++V RG    L FDI  KA+ AETL   D EF  TL+  E+ VYR   +S++ GL+IP  +++G +   +V+  S          Y  K   A  ++E++ +T +RI+GSL A G SF PT A+AFIK+ARV  +DGS+  +V+ +  DV+AGT  G+ +P++D
Sbjct:   47 GKIVNIVEEF-----IPATVTRDEFSDFTSYSSESGVGRITRVGLNVNRGAYGTLYFDIVVKAIDAETLQKNDKEFEATLSAAEKSVYRTRKASWKKGLDIPLFKWIGADFDKKVTTESFTEEAASQENYTEKVRAASQLLENSASTKIRISGSLKATGISFRPTVAFAFIKLARVTFEDGSSQLIVSNNPEDVVAGTSGGDVLPSED 249          
BLAST of Ggra9340.t1 vs. uniprot
Match: R7QDJ6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDJ6_CHOCR)

HSP 1 Score: 120 bits (301), Expect = 5.130e-29
Identity = 72/202 (35.64%), Postives = 111/202 (54.95%), Query Frame = 0
Query:   75 VLADF--SARVSVPTVSKQQEEAVYVVESSRTGYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLNQTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARDYWSEYETKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDAGDVLAGTGEGIPTD 274
            +LAD   ++  S P + KQ    ++V  +S  G+ R++  GVSV  G  A L F    +A++A  L      F R L   E   Y  L  +Y GGLN+PF+  +G NL   V+R  +  + +  S Y +KA  ARN++ +   T L ++GS+   G S IP   + F KVA+V+L +G+++ VV+TD  D++A T EG  T+
Sbjct:   52 ILADLIPTSPESEPPMEKQP---LFVFRNSTVGFTRISGAGVSVTSGAGASLGFSFSIEALNATLLQENSVVFRRRLTMEENVSYTELVRNYSGGLNMPFMETIGANLDMNVTRDDLTESFNSQSNYNSKARAARNVLTADPPTMLTLSGSIMVSGNSIIPKTFFPFAKVAQVQLNNGTSVVVVSTDPKDIVAATAEGFTTE 250          
BLAST of Ggra9340.t1 vs. uniprot
Match: A0A2V3IL72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 1.790e-19
Identity = 59/174 (33.91%), Postives = 94/174 (54.02%), Query Frame = 0
Query:   93 EEAVYVVESSRTGYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLNQTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARDYWSEYETKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDAGDVLAG 266
            E    V+      +G + +  ++V+ G  A   F+ +   V++  LA  D  F  T+N  ER +Y      Y GGL+IPFLR +G++L    S  +   +RD +  Y  KA  AR I++S +   LRI G+++ +G S  P+ A  F+K +RV L D + L VV+++  DV+AG
Sbjct:   50 ERETQVLSDHALLFGPIGQATLNVRLGLRASFSFNYRIDGVTSAYLAASDHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNESHSLDANLVSRDDY--YALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAG 221          
BLAST of Ggra9340.t1 vs. uniprot
Match: R7Q4Y7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 67.4 bits (163), Expect = 1.580e-10
Identity = 34/98 (34.69%), Postives = 58/98 (59.18%), Query Frame = 0
Query:  173 LRFVGVNLGGQVSRTSMDRARDYWSEYETKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDAGDVLAGTGEG 270
            + F G ++   +S+  +   R+   E+  +     +I+E+   T +RI G+LTA G S IPT A+AF+++AR+E +DGST  VV+    D++A   +G
Sbjct:    2 IEFTGADILEDLSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDG 99          
BLAST of Ggra9340.t1 vs. uniprot
Match: A0A8J8M7R0 (Uncharacterized protein n=2 Tax=Vallitalea guaymasensis TaxID=1185412 RepID=A0A8J8M7R0_9FIRM)

HSP 1 Score: 56.6 bits (135), Expect = 7.260e-6
Identity = 44/161 (27.33%), Postives = 73/161 (45.34%), Query Frame = 0
Query:  105 GYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLNQTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARD---YWSEYETKA--STARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDGSTLTVVTTDA 260
            G+G + + GV +  G  A +   +  K V+ + L  F       L   +       SS    G+       +   + G  S      AR+      E E KA     ++I E     +  ++G++ A G S+IPT+AY F++V R++ +DGSTL V+ T+A
Sbjct:   43 GFGYVGKAGVRLTAGAEADINIKMNVKTVTQDQLVEFIETHKDKLTADQYSEISENSSFEAEGMGANLFNCLVSVVYGDGSSDYFANARNKEVLLGEEEDKAILKELKDITEQ----EYELSGTIKARGLSYIPTEAYCFVEVTRIQFKDGSTLKVINTNA 199          
The following BLAST results are available for this feature:
BLAST of Ggra9340.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
R7QBR73.710e-3941.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QSG93.760e-3839.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q6376.640e-3737.98Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QDJ65.130e-2935.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IL721.790e-1933.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4Y71.580e-1034.69Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A8J8M7R07.260e-627.33Uncharacterized protein n=2 Tax=Vallitalea guaymas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..288
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableTMHMMTMhelixcoord: 5..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:30305..31171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9340.t1Ggra9340.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 30305..31171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9340.t1 ID=Ggra9340.t1|Name=Ggra9340.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=289bp
MKYSAALFALLALFLATSHGAVIHQETAMFEFEDAEPLPSAEAVEDIEVI
AEDDVLQLQDLDGANKRRVGAHINVLADFSARVSVPTVSKQQEEAVYVVE
SSRTGYGRLTRTGVSVQRGTSARLEFDIKTKAVSAETLATFDSEFVRTLN
QTEREVYRRLSSSYRGGLNIPFLRFVGVNLGGQVSRTSMDRARDYWSEYE
TKASTARNIIESTKATDLRITGSLTAVGTSFIPTKAYAFIKVARVELQDG
STLTVVTTDAGDVLAGTGEGIPTDDNDDGDLEVIELAF*
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