Ggra9329.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9329.t1
Unique NameGgra9329.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1173
Homology
BLAST of Ggra9329.t1 vs. uniprot
Match: A0A2V3J5L3 (Tripeptidyl aminopeptidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L3_9FLOR)

HSP 1 Score: 505 bits (1300), Expect = 1.180e-164
Identity = 260/397 (65.49%), Postives = 300/397 (75.57%), Query Frame = 0
Query:  801 SLRTKHWSALTLVPGPPGFSVLSQSIGRAESLEFADELKRPVILFDPRGTGNASRLNCSLQSQPLSLDVDLLHIRNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDL-------------------------LDSPLPMRYKDVYGVRNHAAYARIHAERNKNNPMFSPTKFQGQLRTVLRRLRWNRAVRQILKIDPRLIFHMYRLTSDSFADAVASAANEKSYIGLKQIAGKLEPSVHPLRILSVATAVSTLCNSMVDLVPWEVDATMLERLNMLADDVFHTVRLHDYSPFHRTEGFESLVKYCPAMPFPQLRREGLPLDKEPQKQIPTLVLVGDLDSRTPMEDLVDLDPVFKENVAVVRGADHVVNRHPCGMLLTSEFLNDGSVKNMSACQ 1172
            S+ T    A  LVPG PG S+L+ S     SL+  DELKRPVILFDPRGTGN+SRLNCSLQ++PLS D+DLL+IR C SE+G++V HYS NAIVNDLE LR AL FKQLDL                         LDSPLPMRY D+Y VR+HAAYARIHAE+NK+NP FS  KF+ QL++VLRRLRWNR +R+ LKIDPR++FHMYR  SDSFA ++ASAANEK+Y GLK+IA  LEPSV PLR  SVA +VSTLCNSMVDLVPW++DA  +ERL ML  DV   V L+ +SPF+ TEGFESL K+CPAM  PQLRREGLPLDK  QK IP LVLVGDLD+ TPMED+VDLD V K NVAVV+GADHVV+ HPCGMLL  EF   G+V NMSACQ
Sbjct:   65 SIPTNSDIAFVLVPGGPGGSILTHSPRELTSLDLIDELKRPVILFDPRGTGNSSRLNCSLQAKPLSFDIDLLNIRRCFSEIGNEVFHYSTNAIVNDLEMLRNALNFKQLDLFGVSYGTLISQAYGVLYPDSVHSMLLDSPLPMRYTDLYEVRHHAAYARIHAEKNKHNPNFSARKFKNQLKSVLRRLRWNRTLREDLKIDPRILFHMYRFPSDSFASSIASAANEKNYTGLKEIARSLEPSVQPLRNFSVAMSVSTLCNSMVDLVPWDIDAGFIERLTMLGYDVLRKVGLYGFSPFYLTEGFESLAKHCPAMSVPQLRREGLPLDKGQQKYIPALVLVGDLDAITPMEDVVDLDAVLKNNVAVVKGADHVVSLHPCGMLLFLEFAAHGAVSNMSACQ 461          
BLAST of Ggra9329.t1 vs. uniprot
Match: A0A2V3IF31 (Tripeptidyl aminopeptidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF31_9FLOR)

HSP 1 Score: 272 bits (695), Expect = 1.100e-78
Identity = 142/258 (55.04%), Postives = 182/258 (70.54%), Query Frame = 0
Query:  809 ALTLVPGPPGFSVLSQSIGRAESLEFADELKRPVILFDPRGTGNASRLNCSLQSQPLSL--DVDLLHIRNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDL-------------------------LDSPLPMRYKDVYGVRNHAAYARIHAERNKNNPMFSPTKFQGQLRTVLRRLRWNRAVRQILKIDPRLIFHMYRLTSDSFADAVASAANEKSYIGLKQIAGKLEPSVHPLRILSVATAVSTLCNSMVDL 1039
            AL ++PG PG ++L+       S +  +EL+RPVILFDPRGTGN SRLNCSLQ +PLSL  D+DL  IR CLSE+GD+V HYS  AIVNDLE LR ALGFK+ DL                         LDSP+PMR KD+Y VRNH AYARI+AE+++ NP FS   F  QL++VL RLRWNRA+R+ LKIDPRL++H+YR T DSF +A+ASAA++++Y GL+ +A + +P + PLR  S+A AVST CN++VDL
Sbjct:   72 ALVIIPGGPGGALLTHHPAGITSFQLVNELQRPVILFDPRGTGNGSRLNCSLQQKPLSLHLDIDLFDIRRCLSEIGDEVFHYSATAIVNDLELLRIALGFKKWDLFGYSYGGLISQVYGLLYPNSIGSMLLDSPVPMRDKDLYQVRNHEAYARIYAEKHRENPKFSMESFSNQLKSVLWRLRWNRALREDLKIDPRLLYHVYRFTPDSFPEAIASAADDRNYTGLQALAEEFDPRLVPLRNWSIAMAVSTTCNTIVDL 329          
BLAST of Ggra9329.t1 vs. uniprot
Match: A0A523M5N3 (Alpha/beta fold hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523M5N3_9GAMM)

HSP 1 Score: 63.9 bits (154), Expect = 1.210e-6
Identity = 93/389 (23.91%), Postives = 147/389 (37.79%), Query Frame = 0
Query:  785 DVDANMIEAVVDNVIASLRTKHWSALTLVPGPPGFSVLSQSIGRAESLEFADELKRPVILFDPRGTGNASRLNC----SLQSQPLSLDVDLLHIRNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDLLDSPLPMRYKDVYGVRNHAAYARIHAERNKNNPMFSPTKFQGQLRTVLRRLRWNRAVRQILKIDPRLIFHMY--------RLTSD-----SFADAVASAANEKSYIGLKQI--------AGKLEP---------------SVHPLRILSVATAVSTLCNSMVDLVPWEVDATMLERLNMLADDVFHTVRLHDYSPFHRTEGFESLVKYCPAMPFPQLRR-EGL-------PLD---KEP-QKQIPTLVLVGDLDSRTP 1121
            D D+  I   V  V A     H   L  + G PG S +    G A + E      R ++L D RGTG ++R++C     L       ++ + + + CL  +  D  +++ +  V DLE +RKALG+  L+L        Y   YG R    YAR               ++    RT++     +  V   L + P +             R T+D     +F D  AS    ++ +  K +         G++E                +  P  I  +   VS   NS    +  +   T++     LA  + +TV   + +PF   + F+        M   QLR  E +       P+D   K+P    IPTL+L G  D  TP
Sbjct:   57 DPDSPTISLRVAVVPALNLQPHADPLVPLAGGPGQSAVQFYSGYAAAFERVRS-NRDILLVDQRGTGESARMDCPIDDDLDEYEFDAELTIKYTQECLDALPYDPRYFTTSIAVQDLEAVRKALGYPTLNL--------YGASYGTRVAQHYAR---------------RYPDSTRTII----LDGVVPPQLSLGPEIAIESQKAIDNIFARCTADPACNAAFPDVAASFVKLRNTLSKKAVNVSVAHPVTGRVESVKFGQAELAATVRLLAYSPRSIAMLPLLVSEASNSNYPPLVAQYQMTLMSLSETLAIGMHNTVLCTEDAPFFNPDAFDMAALEGSFMGTMQLRAIEAICSVWPAGPIDEDFKQPLSTAIPTLLLSGTADPSTP 417          
BLAST of Ggra9329.t1 vs. uniprot
Match: alpha/beta fold hydrolase n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001930D47E (alpha/beta fold hydrolase n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001930D47E)

HSP 1 Score: 63.9 bits (154), Expect = 1.490e-6
Identity = 104/414 (25.12%), Postives = 156/414 (37.68%), Query Frame = 0
Query:  788 ANMIEAVVDNVIASLRTKHWSALTLVPGPPGFSVLSQSIGRAESLEFADELKRPVILFDPRGTGNASRLNCS-LQSQPLSLDVDLLHIRNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDLLDSPLPMRYKDVYGVRNHAAYARI---HAER----------------NKNNPMFSPT---------------------KFQGQLR-TVLRRLRWNRAVRQI-LKIDPRLIFHMYRLTSDSFADAVASAANEKSYIGLKQIAGKLEPSVHPLRIL---------SVATAVSTLCNSMVDLVPWEVDATMLERLNMLADDVFHTVRLHDYSPFHRTEGFESLVKYCPAMPFPQLRREGLPLDKEPQKQIPTLVLVGDLDSRTPMEDLVDLDPVFKENVAV-VRGADHVVNR 1148
            AN +   V   IA    +    L  + G PG + +S+ IG   ++ F  +  R VI FD RGTG +  L C  L+  P   D        C + +G     Y+    V D+E +R+ LG  +L L            YG     AYAR    H ER                  N     P+                     K   QLR T L+   ++R  R   ++I P  +F +  LT   +  A+ +A        LK     L   +   R L         SVA   ST+C +    +PW+   T +E    +       V  + ++PF      E  +  C  + +P + R  + +   P   +PTL+L G+ D RTP        P + +NVA  + GA  +V R
Sbjct:   49 ANTMPGTVPLRIARAGRRSGPTLMYLSGGPGGAGVSEMIGVLAAVPFLLDRFR-VIGFDQRGTGRSGLLRCPRLEKDPYLRDTGAAE--ECAARIGPARRFYTTPDSVQDMEAIRQQLGSAKLTLFGIS--------YGTELAVAYARAFPQHVERLILDSVVDYDDRDPFATVNFRAMGPSLKSLCPGGCRGISADPGADLAKLVAQLRVTPLQAFAYDRLGRSTRVRITPTALFDLMLLTD--YLPALRAAVPAGVQAALKGDGALLARLIREARRLEGFGSPRDFSVARY-STVCETTP--LPWD-PGTPIEARAAITQQRLAAVAPNAFAPFDAAVVLEDEIDLC--LRWPDVPRPVVDVPAPPYPTVPTLILQGNEDLRTP--------PEWSQNVASRIPGAHRIVIR 435          
BLAST of Ggra9329.t1 vs. uniprot
Match: A0A7X7PU88 (Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7X7PU88_9GAMM)

HSP 1 Score: 63.2 bits (152), Expect = 2.170e-6
Identity = 55/217 (25.35%), Postives = 98/217 (45.16%), Query Frame = 0
Query:  798 VIASLRTK-HWSALTLVPGPPGFSVLSQSIGRAESLEFADELK-RPVILFDPRGTGNASRLNCSLQSQPLSLDVDLLHI----RNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDLLDSPLPMRYKDVYGVRNHAAYARIHAERNKNNPMFSPTKFQGQLRTVLRRLRWNRAVRQILKIDPRLIFHMYRLTSDSFADAVASAANEKSYIGLKQ 1008
            V+ +LRT+    AL ++ G PG +     +  A +  FA   + R +++ D RGTG +++L+C L      ++VD   I    ++CL+ +  D   Y+ +  V DLE +R ALG++Q+DL        Y   YG R    Y +               ++  ++R ++     +  V   L + P +     R     F    ASAA  +++  L++
Sbjct:   82 VVPALRTEAEPDALFVLSGGPGQAASDFYVAMAHA--FARIRRDRDIVVLDQRGTGRSNKLSCPLPDDAALIEVDSSRIQGYTKDCLASLSGDPRFYTTSVAVRDLEDIRAALGYEQIDL--------YGVSYGTRVAQHYLK---------------RYPARVRAMV----LDGVVPPELALGPHIPLEAQRALDAIFGRCAASAACNEAFPSLRE 269          
BLAST of Ggra9329.t1 vs. uniprot
Match: A0A2N6CIM0 (Alpha/beta hydrolase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2N6CIM0_9GAMM)

HSP 1 Score: 61.2 bits (147), Expect = 8.480e-6
Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 0
Query:  787 DANMIEAVVDNVIASLRTKHWSALTLVPGPPGFSVLSQSIGRAESLEFAD-ELKRPVILFDPRGTGNASRLNC----SLQSQPLSLDVDLLHIRNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDLLDSPLPMRYKDVYGVRNHAAYARIHAERNK 941
            D   I+  V  V A  +    +  T + G PG +  S     A +  F+  +    +IL D RGTG +  L+C     L +   SL++     R CL+ +  DV  Y+ +  V DL+ LR+ALG++QL+L        Y   YG R    Y R + +R +
Sbjct:   64 DGRQIDLFVAVVPALSQKPAATPFTAIAGGPGAA--STEFYAAYAGAFSRIQRNHDIILIDQRGTGRSGALDCPVPEELDAADWSLELVRDSTRECLASIDADVRQYTTSVAVRDLDRLREALGYEQLNL--------YGSSYGTRVAQHYMRRYPQRTR 213          
BLAST of Ggra9329.t1 vs. uniprot
Match: A0A2N2P8W0 (Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium HGW-Chloroflexi-10 TaxID=2013724 RepID=A0A2N2P8W0_9CHLR)

HSP 1 Score: 61.2 bits (147), Expect = 8.520e-6
Identity = 93/430 (21.63%), Postives = 169/430 (39.30%), Query Frame = 0
Query:  787 DANMIEAVVDNVIASLRTKHWSALTLVPGPPGFSVLSQSIGRAESLEFADELKRPVILFDPRGTGNASRLNCSLQSQPLSLDVDLL-HIRNCLSEVGDDVLHYSVNAIVNDLETLRKALGFKQLDLLDSPLPMRYKDVYGVRNHAAYARIHAERNKN-------------------------NPMFSPTK-----------FQGQLRTVLRRLRWNRAVRQILKIDP--------RLIFHMYRLTSDSFADAVASAANEKSYIGLKQIAGKLEPSVHPLRILSVATAVSTLCNSMVDLVPWEVDATMLERLNMLADDVFHTVRLHDYSPFHRTEGFESLVKYCPAMPFPQLRREGLPLD-KEP-QKQIPTLVLVGDLDSRTPMEDLVDLDPVFKENVAVVR-GADHVVNRHPCGMLLTSEFLNDGSVKNM 1168
            D   I+  +  + A  R      +  + G PG +     +  + +    ++ KR ++L D RGTG ++ L C    +  + + D+  ++++CL ++  D   Y+    + DL+ +R+ALG++Q++L        Y   YG R    Y +   ER ++                         + MF+  +              +   +L +LR + A  QI   DP              + +T    + A  S A     I          P     RI +V +  S++   M + V    D   ++       D+ HTV+ +D   ++      +L + C   P       G+  D K P Q  +P L+L G+ D  TP E+  ++      ++A+V  G  H V    C   L  +F+ DGS++N+
Sbjct:   69 DGRQIKLKIAVIPAVSRNPAPDPIFFLTGGPGQAATESYLSLSGAFYRINQ-KRDIVLVDQRGTGASNPLTCKEPEEEQAEEADIADYVKDCLEQMDGDPRFYTTTFAMQDLDAVREALGYEQINL--------YGVSYGTRAAQTYLKYFPERVRSVVLDGVVPQDEALGIDVARDAQRALDNMFARCQQDSICFANFPQVAAEFDALLEKLRESPA--QITLPDPLTGEKDTGEFNLEQFVITIRLLSYAPESVAFMPLLIHTAYEQQDFSPLAAQYRI-AVGSLTSSISGGMGNSVLCSEDTPFMK-------DIDHTVKTND--TYYGDLQISNLEEVCDLWP-----TLGVDADFKNPVQSDVPVLLLSGEDDPVTPPENAEEVAAFLANSLALVAPGQGHNVVLRGCIPDLMYQFVQDGSLENL 472          
The following BLAST results are available for this feature:
BLAST of Ggra9329.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J5L31.180e-16465.49Tripeptidyl aminopeptidase n=1 Tax=Gracilariopsis ... [more]
A0A2V3IF311.100e-7855.04Tripeptidyl aminopeptidase n=1 Tax=Gracilariopsis ... [more]
A0A523M5N31.210e-623.91Alpha/beta fold hydrolase n=1 Tax=Gammaproteobacte... [more]
alpha/beta fold hydrolase n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001930D47E1.490e-625.12alpha/beta fold hydrolase n=1 Tax=Solirubrobacter ... [more]
A0A7X7PU882.170e-625.35Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bact... [more]
A0A2N6CIM08.480e-630.00Alpha/beta hydrolase n=1 Tax=Chromatiales bacteriu... [more]
A0A2N2P8W08.520e-621.63Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 803..912
e-value: 3.2E-5
score: 25.8
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 837..1144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:897382..904247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9329.t1Ggra9329.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 897382..904247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9329.t1 ID=Ggra9329.t1|Name=Ggra9329.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1173bp
MPHSRNADPFKPFYFTNFSKSSTLPPIEHHVVECLKQIQSEIPSIPDAHT
IIPNIVISALLSVNAWPLGRSMNSSSDQSYLVANRNRILEIGFVDWSDSG
RRVSIKECWTVDVRTKISRLRQSEVQKLRWHSIYNPVELVPLVDLKLTVP
RDGPSEVWSRQSVGAMSRRRIILSYVHDRDSDSQIEWEGNRRPARLTRTE
AEQVSRPQFLSTVQCFVLDDLWHDGMKYPTPDGVRNGYAGVVPYMLPGSA
VWHCVPRLRKGYGYPSLEDEQLDSILNTFAELRSGKRLLVGVDKVEIQYA
EDEPYRDLSGVRRLWLMAEAVCGMLRDDIIISIQDMAGLALTLMHYENLS
SELLAVARNYGRSSEIERKRRIPCIGRLRGKPTWKELCNSGEGAEAILKQ
TLTKSDIDEKEVYLFDRAVAAFDLKLRLLKFWYSLMFAEGPITDLQKLRF
EVLEDLAVAPAWEQEDRAMVYFMVEAAVINCLERRIPYEESVRRFLRAKN
GGALLLESVNLRSERLVMEMTRFQLETMLIYNYAAALRQPGFVPKNMALK
AAWLSGQEGPSYLGRFTTSMSKQLYIKAARSWAGYSNEAIVRAATEGKTR
MVVLLTENHRLNRYIDTDSKTEVIVCSIMYMNEEEYNMALSQFGKDHFHA
EKRLFKGKPVLTGSQGQAVVWDKTLTTLCAVDRKGRWAQLSSPERLYQIV
VTSKIGSEDARLAAIRIACNGTEVEPVAASPVDVINHVTAEDERTLFGMR
PDQISPDGVNIVDYSFEYERFWADCDGRTRSTMTDVDANMIEAVVDNVIA
SLRTKHWSALTLVPGPPGFSVLSQSIGRAESLEFADELKRPVILFDPRGT
GNASRLNCSLQSQPLSLDVDLLHIRNCLSEVGDDVLHYSVNAIVNDLETL
RKALGFKQLDLLDSPLPMRYKDVYGVRNHAAYARIHAERNKNNPMFSPTK
FQGQLRTVLRRLRWNRAVRQILKIDPRLIFHMYRLTSDSFADAVASAANE
KSYIGLKQIAGKLEPSVHPLRILSVATAVSTLCNSMVDLVPWEVDATMLE
RLNMLADDVFHTVRLHDYSPFHRTEGFESLVKYCPAMPFPQLRREGLPLD
KEPQKQIPTLVLVGDLDSRTPMEDLVDLDPVFKENVAVVRGADHVVNRHP
CGMLLTSEFLNDGSVKNMSACQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase