Ggra9319.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9319.t1
Unique NameGgra9319.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length240
Homology
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A485PVH1 (Alginate lyase (PL7) n=3 Tax=Paradendryphiella salina TaxID=179392 RepID=A0A485PVH1_9PLEO)

HSP 1 Score: 189 bits (480), Expect = 1.580e-56
Identity = 107/232 (46.12%), Postives = 146/232 (62.93%), Query Frame = 0
Query:   13 SLCLPEVLAYTAPSTKAKFHPVLARAKLQAPDSSTAA---SNLFGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSVESSNTLH---AEIALPKPVSDMNEITFLQVHSGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSASARTKFKELDW 238
            SL  P V AYTAPST++KF  VL++AKLQ P S+T A     L GY++SYF+L    YMQFQ+ G+S+RSELREM+T+GD+AAW    S T H   A+IA+P     + E+T LQVH     P LRISW  S   +G T  D +++ +R+G+  +   K  L    T    + I V+NSK+S+ + G+  L+EA ++ +    TCYFKAG Y NNP+  SA+AR K  EL+W
Sbjct:   14 SLVAPAVAAYTAPSTESKFTEVLSKAKLQYPTSTTVAFADDLLDGYAASYFYLTSDLYMQFQVAGSSQRSELREMETSGDEAAWDCTGS-TAHVASAQIAIPVQEDGIEEVTILQVHDSDVTPVLRISWVSSITIDGVTSEDVVLATIRNGIDDSTATKTVLQAHTTSRTEFNINVQNSKLSITVDGTTELDEADISQFDG-STCYFKAGAYNNNPTDTSANARIKMYELEW 243          
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A7I9C8Z1 (Alginate lyase n=1 Tax=Paradendryphiella salina TaxID=179392 RepID=A0A7I9C8Z1_9PLEO)

HSP 1 Score: 174 bits (441), Expect = 1.090e-50
Identity = 103/234 (44.02%), Postives = 144/234 (61.54%), Query Frame = 0
Query:   13 SLCLPEVLAYTAPSTKAKFHPVLARAKLQAPDSSTAASN---LFGYSSSYFHLQGGTYMQFQMKGASKRSELREM-KTNGDKAAWSVE--SSNTLHAEIALPKPVSDMNEITFLQVHSGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVN--KKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSASARTKFKELDW 238
            SL     +A TA S+   F PVL  AKLQ P S+ AAS+   L GY  S F+LQ G YMQFQ+ G+S R ELR+M    G +  W+V+  +++T  + I +P+ V  + E+T +Q+HSG + P LRISW +S   +G  Y D I+S +R G G +  N  K  LA R  G  S++I VK+SK+++ + G+ V+N   ++FW    +CYFKAG Y NNP+S SA+AR KF  L W
Sbjct:    8 SLLATNAMALTAVSSIDTFLPVLNEAKLQWPTSALAASSEELLGGYVGSQFYLQDGKYMQFQIAGSSNRCELRQMIPDGGSEIGWAVDDGTTHTATSSIVVPEQVDGVEEVTIMQIHSGEA-PQLRISWIRSKSLDGVAYEDFIMSTVRIGTGDSSDNFVKTHLADRTAGAMSFQIDVKDSKLTITVNGNVVVNGQDLSFWDGTDSCYFKAGAYNNNPTSESATARIKFAALAW 240          
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A7I9C7R9 (Alginate lyase n=1 Tax=Paradendryphiella salina TaxID=179392 RepID=A0A7I9C7R9_9PLEO)

HSP 1 Score: 157 bits (397), Expect = 5.120e-44
Identity = 90/224 (40.18%), Postives = 132/224 (58.93%), Query Frame = 0
Query:   22 YTAPSTKAKFHPVLARAKLQAPDSSTAASN--LF-GYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSVESSNT--LHAEIALPKPVSDMNEITFLQVHSGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVN--KKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSASARTKFKELDW 238
            Y APST +    VL RAKLQ P S  +A++  L+ G+++++F L  G YMQ Q+ GAS+RSELR+M+  G +  W+V+   T      I +P     + E+T +Q+H G + P LRISW  S K +G  Y D IIS +R GLGS+     K  L +R+    +Y+I   +SK+S+ + G   ++   ++FW    + YFKAG Y N+PS +SA+AR  F  L W
Sbjct:   23 YVAPSTNSTLQSVLTRAKLQYPTSELSATSTELYNGFAAAHFQLIEGRYMQLQVAGASRRSELRQMEKFGSEEYWAVDDGETHISKGSIMVPAQEDGIEEVTIMQIHGGPA-PILRISWVSSIKIDGTEYEDVIISTIRVGLGSSSDQFIKNVLTERYDAFLTYRIEAVDSKLSIKVDGQTKVDNVDVSFWDGDASNYFKAGAYNNHPSDSSATARVLFNSLSW 245          
BLAST of Ggra9319.t1 vs. uniprot
Match: polysaccharide lyase family 7 protein n=1 Tax=Marinoscillum furvescens TaxID=1026 RepID=UPI00162525E0 (polysaccharide lyase family 7 protein n=1 Tax=Marinoscillum furvescens TaxID=1026 RepID=UPI00162525E0)

HSP 1 Score: 84.0 bits (206), Expect = 2.520e-15
Identity = 71/242 (29.34%), Postives = 124/242 (51.24%), Query Frame = 0
Query:    5 FVLLCAVCSLCLPEVLAYTAPSTKAKFHPVLARAKLQAPDSSTAASNL---FGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSV-ESSNTLHAEIALPKPVSDMNEITFLQVH------SGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSASARTKFKEL 236
            F+LLC  C   + +   Y AP    +F   +   KLQAP SST A+N     GY+SS+F++  G  + F   G+ +R+ELR+++       W + ++  +L  +I + +   D  ++T +Q+H      SG +KP LRI     YK N K+ ++ I + ++   G ++     L     G  +  I+++NS++ +   G   +N   ++FW  +P+ Y+KAGVY+ +    +  A   F EL
Sbjct:   29 FLLLC--CCGFISQAQTYNAPYDIPRFQDFIGECKLQAPTSSTEATNSELKAGYTSSWFYVVNGDKVAFNQSGSKQRTELRDLRN------WDLTQADQSLFGKIDIVQQTCD--QVTVMQIHDDANVGSGPNKPLLRI-----YKHNAKSPTNHIWAAIKTDNGGSNTTHIDLGADPGGYFTCHIKLENSRLIIDYEGVEKVNM-DVSFWS-FPS-YWKAGVYLQD----NGEATAHFDEL 248          
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A3D9L5P1 (Putative repeat protein (TIGR02543 family)/predicted secreted protein (Por secretion system target) n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L5P1_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 9.210e-14
Identity = 62/227 (27.31%), Postives = 116/227 (51.10%), Query Frame = 0
Query:   11 VCSLCLPEVLAYTAPSTKAKFHPVLARAKLQAPDSSTAASNL---FGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSV-ESSNTLHAEIALPKPVSDMNEITFLQVH------SGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSA 227
            +C   + +   Y AP    +F   +   KLQAP SST A+N     GY+SS+F++  G  + F   G+ +R+ELR+++       W + ++  +L  +I + +   D  ++T +Q+H      SG +KP LRI     YK N K+ ++ I + ++   G ++     L     G  +  ++++N ++ +   G   +N   ++FW  +P+ Y+KAGVY+ +    +A
Sbjct:   31 ICCSFISQAQTYNAPYDIPRFQDFIGECKLQAPTSSTEATNSELKAGYTSSWFYVVNGDKVAFNQSGSKQRTELRDLRN------WDLTQADQSLFGKIDIVQQTCD--QVTVMQIHDDANAGSGPNKPLLRI-----YKHNAKSPTNHIWAAIKTDNGGSNTTHIDLGADPGGYFTCHVKLENGRMIIDYEGVEKVNM-DVSFW-DFPS-YWKAGVYLQDDGEATA 241          
BLAST of Ggra9319.t1 vs. uniprot
Match: polysaccharide lyase family 7 protein n=1 Tax=Fulvivirga aurantia TaxID=2529383 RepID=UPI0012BCEB43 (polysaccharide lyase family 7 protein n=1 Tax=Fulvivirga aurantia TaxID=2529383 RepID=UPI0012BCEB43)

HSP 1 Score: 75.9 bits (185), Expect = 3.920e-12
Identity = 62/210 (29.52%), Postives = 103/210 (49.05%), Query Frame = 0
Query:   22 YTAPSTKAKFHPVLARAKLQAPDSSTAASN---LFGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSV-ESSNTLHAEIALPKPVSDMNEITFLQVH------SGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINN 221
            Y AP    +F   +   KLQAP SST AS    + G+SS  F++  G  ++F   G S R+ELR + TN     W + +   +LH  +   +   D  ++T +Q+H      SG +KP LRI     YK   K+ +D + + ++   G  +     L    T   S+ +R+ +  + + I G    N   +++W  +P+ Y+KAGVY+ +
Sbjct:  343 YEAPYDIPRFQDFIGGCKLQAPTSSTVASQSDLINGFSSDNFYVVDGDKIEFNQSGESMRTELRHL-TN-----WMISDGDRSLHGRLKFVEQTCD--QVTVVQIHDDANEGSGPNKPLLRI-----YKHQTKSPADHLWAAIKTDAGGVNTTHIDLGSAPTDYFSFDVRLVSGNMIIEINGEEKANM-DVSYWN-FPS-YWKAGVYLQD 536          
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A397L9T2 (Putative secreted protein (Por secretion system target) n=1 Tax=Flavobacteriaceae bacterium MAR_2010_72 TaxID=1250029 RepID=A0A397L9T2_9FLAO)

HSP 1 Score: 75.5 bits (184), Expect = 4.610e-12
Identity = 60/216 (27.78%), Postives = 107/216 (49.54%), Query Frame = 0
Query:   22 YTAPSTKAKFHPVLARAKLQAPDSSTAASN---LFGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSV-ESSNTLHAEIALPKPVSDMNEITFLQVH------SGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSA 227
            Y AP    +F   +   KLQAP SSTAA+    + GY+SS+F++  G  + F   G+  R+ELR+++       W++ +   +LH  I + +   D  ++T +Q+H      +G +KP LRI     YK   K+  + + + ++   G  +     L     G  +  I++    + + + G   LN   ++FW  +P+ Y+KAGVY+ +    +A
Sbjct:   44 YNAPYEIPRFQDFIGECKLQAPTSSTAATQSELIAGYTSSWFYVADGDKVAFNQSGSLNRTELRDLRN------WTISQGDRSLHGRIDIVQQTCD--QVTVMQIHDDANAGNGPNKPLLRI-----YKHQTKSPVNHLWAAVKTDAGGQNTTHIDLGPDPGGYFNCDIKLVGGNMIIDLDGVEKLNM-DVSFWT-FPS-YWKAGVYLQDNGEATA 243          
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A654E2G2 (Alginate lyase (Modular protein) n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654E2G2_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 9.760e-9
Identity = 63/228 (27.63%), Postives = 107/228 (46.93%), Query Frame = 0
Query:   13 SLCLPEVLAYTAPSTKAKFHPVLARAKLQAPDSSTAASNLF---GYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSV-ESSNTLHAEIALPKPVSDMNEITFLQVH------SGASKPALRISWRKSYKENGK---TYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSA 227
            S+ +  V  Y AP    +F   +   KLQAP SST A+      GY+   F++     + F   G+S+R+ELR +        W++ E   +LHA I + +   D  ++T LQ+H      SG +KP LRI     YK   K    +    I    +G+ +  V+   L +   G     +R+ +  + + + G+   N   +++W  +P+ Y+KAGVY+ +    +A
Sbjct:  396 SIAVNPVAEYNAPYDIPRFKAFIGECKLQAPTSSTIATQTQLKDGYTDDNFYVVDEDKVAFNQSGSSQRTELRYLNN------WTLSEGDRSLHARIHIVEMTCD--QVTVLQIHDDANTGSGPNKPLLRI-----YKHQTKEPVNHLWAAIKTDNEGVNTTHVD---LGEAPAGYFDCDVRLVDGSMIIDVDGAEKANM-DVSYWT-FPS-YWKAGVYLQDDGEATA 604          
BLAST of Ggra9319.t1 vs. uniprot
Match: A0A654DZ54 (Putative secreted protein (Por secretion system target) n=2 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DZ54_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 6.900e-8
Identity = 59/225 (26.22%), Postives = 105/225 (46.67%), Query Frame = 0
Query:   22 YTAPSTKAKFHPVLARAKLQAPDSSTAASN---LFGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSVE-SSNTLHAEIALPKPVSDMNEITFLQVH------SGASKPALRISWRKSYKENGKTYSDCIISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEASMAFWKQYPTCYFKAGVYINNPSSNSASARTKFKEL 236
            Y+AP    +F   +   KLQAP SST A+    + G+++S F++  G  + F   G S+R+ELR+++       W +  +   L   I + +   D  ++T +Q+H      +G +KP LRI     YK   K+  + I + ++   G        L     G    +I++    + +   G   +N   +++W  +P+ Y+KAGVY+ +    +  A   F EL
Sbjct:   40 YSAPYDIPRFQAFMGECKLQAPTSSTMATQSDIINGFTNSNFYVADGDKVAFNQSGGSQRTELRDLRN------WDLTVNDQQLFGRIDIVQQTCD--QVTVMQIHDDANAGNGPNKPLLRI-----YKHQTKSPVNHIWAAIKTDAGGQATTHIDLGADPGGYFDCEIQLVGGNMIIKFQGVEKVNM-DVSYW-DWPS-YWKAGVYLQD----NGEATAHFDEL 244          
The following BLAST results are available for this feature:
BLAST of Ggra9319.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A485PVH11.580e-5646.12Alginate lyase (PL7) n=3 Tax=Paradendryphiella sal... [more]
A0A7I9C8Z11.090e-5044.02Alginate lyase n=1 Tax=Paradendryphiella salina Ta... [more]
A0A7I9C7R95.120e-4440.18Alginate lyase n=1 Tax=Paradendryphiella salina Ta... [more]
polysaccharide lyase family 7 protein n=1 Tax=Marinoscillum furvescens TaxID=1026 RepID=UPI00162525E02.520e-1529.34polysaccharide lyase family 7 protein n=1 Tax=Mari... [more]
A0A3D9L5P19.210e-1427.31Putative repeat protein (TIGR02543 family)/predict... [more]
polysaccharide lyase family 7 protein n=1 Tax=Fulvivirga aurantia TaxID=2529383 RepID=UPI0012BCEB433.920e-1229.52polysaccharide lyase family 7 protein n=1 Tax=Fulv... [more]
A0A397L9T24.610e-1227.78Putative secreted protein (Por secretion system ta... [more]
A0A654E2G29.760e-927.63Alginate lyase (Modular protein) n=1 Tax=Marinosci... [more]
A0A654DZ546.900e-826.22Putative secreted protein (Por secretion system ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014895Alginate lyase 2PFAMPF08787Alginate_lyase2coord: 47..237
e-value: 1.9E-22
score: 80.2
NoneNo IPR availableGENE3D2.60.120.200coord: 25..239
e-value: 3.3E-28
score: 100.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 53..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:635091..635810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9319.t1Ggra9319.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 635091..635810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9319.t1 ID=Ggra9319.t1|Name=Ggra9319.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=240bp
MQPLFVLLCAVCSLCLPEVLAYTAPSTKAKFHPVLARAKLQAPDSSTAAS
NLFGYSSSYFHLQGGTYMQFQMKGASKRSELREMKTNGDKAAWSVESSNT
LHAEIALPKPVSDMNEITFLQVHSGASKPALRISWRKSYKENGKTYSDCI
ISNLRDGLGSNDVNKKFLAQRHTGTKSYKIRVKNSKVSVWIGGSRVLNEA
SMAFWKQYPTCYFKAGVYINNPSSNSASARTKFKELDWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014895Alginate_lyase_2
IPR013320ConA-like_dom_sf