Ggra9306.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9306.t1
Unique NameGgra9306.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length398
Homology
BLAST of Ggra9306.t1 vs. uniprot
Match: A0A2V3IQH3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQH3_9FLOR)

HSP 1 Score: 430 bits (1106), Expect = 1.390e-146
Identity = 217/321 (67.60%), Postives = 264/321 (82.24%), Query Frame = 0
Query:   39 LPVQFRQISQQVLNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIPTGHSCSVTAKVRHTHFGAHFSSSSTLDLSGNSLSEALALALKLPVRANGRVDVRQRFGYRFLGKCKRLGRDTFALKADASTTADVVVGFALNPSIKTLSSGNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTITDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLLNVAERRVEKEAKGFGEDVEQKLNEELRQALKLGADGKRKFVIKSNILELINTAGKNADVFV 359
            LPV  +QIS +VL CKS++P++R ICDV L  VN+EL++ G+AIRKDGVLFTYDDPK   IPTGHSCSVTAKVRH H  AHFSSSSTL L+GNS+S+ LAL LKLPVR + RVDVRQRFG RF GKCKR  RDTF+LKA A T ADVVVG +LNPS + LS+GN+ELTLMPVIA LFEL++LD  FRVS VSPITP+ TFIVGFKS++L++IT +FKG SLK  F+ + RSL+YD GAP+VLG+GALPRPLE L+FD+L N+AER++E++AKG GE +E KLN+ELR+ALKLG DGKR  VIK N L+L+ ++    D+FV
Sbjct:   42 LPVS-KQISPEVLRCKSTNPIVRGICDVALGKVNSELEAAGIAIRKDGVLFTYDDPKHVSIPTGHSCSVTAKVRHKHATAHFSSSSTLRLTGNSISDKLALRLKLPVRVSARVDVRQRFGARFFGKCKRYARDTFSLKAKADTRADVVVGLSLNPSFRKLSNGNFELTLMPVIAALFELDDLDLKFRVSKVSPITPIWTFIVGFKSTLLKSITGLFKGDSLKSIFKDIKRSLLYDFGAPVVLGIGALPRPLETLVFDALSNIAERKIERKAKGVGESLEDKLNDELRRALKLGPDGKRVIVIKGNFLDLLRSSPNTKDLFV 361          
BLAST of Ggra9306.t1 vs. uniprot
Match: A0A2V3II64 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II64_9FLOR)

HSP 1 Score: 271 bits (694), Expect = 1.870e-83
Identity = 139/334 (41.62%), Postives = 215/334 (64.37%), Query Frame = 0
Query:   35 SGIHLPVQFRQISQQVLNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIPTGHSCSVTAKVRHTHFGAHFSSSSTLDLSGNSLSEALALALKLPVRANGRVDVRQRFG--------YRFLGKCKRLGRDTFALKADASTTADVVVGFALNPSIKTLSSGNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTITDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLLNVAERRVEKEAKGFGEDVEQKLNEELRQALKLGADGKRKFVIKSNILELINTAGKNADVFVK 360
            + + + V+  Q+S +V  C SS+ + RA+C   L  VN+EL+  G++I ++GVLF YDDP +++I TG SCSVTA+ RH H  A F  S+ L L GNSL+E   L LKLPV  +GRVD++QRFG        ++   KCK    D+++LK   ST A++ +GF L PS+ T++SG+Y + L P++  + +LE+ D     S VSPI  V + +VG+ S++ +       GKS+    ER   ++ +D+G+ +VLG+G+LP PLE L++  L  V E    K+A+G+GED+E  LN+++R+AL +G+DGKR  +IK N +E++   G+N +VFV+
Sbjct:   35 TDLSVAVKASQVSTEVFRCDSSNAIHRALCRAALNKVNSELEGAGISIDRNGVLFVYDDPSNRKIQTGKSCSVTAEQRHQHLEARFKRSARLRLKGNSLTEPFVLRLKLPVTLSGRVDIKQRFGAKVPQISSFKIRMKCKNYASDSYSLKGSLSTNANMGIGFYLKPSLGTVASGDYAIVLQPIVRVVTKLESTDIRLDASGVSPIAAVWSSVVGWTSTLTQVADAALNGKSITAVIER---NVAWDVGSAVVLGIGSLPAPLEKLLWKLLSTVGEFLARKKARGYGEDIEDDLNKKVRRALNVGSDGKRVIIIKRNFMEMLRKQGENENVFVR 365          
BLAST of Ggra9306.t1 vs. uniprot
Match: A0A2V3IEL9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEL9_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 1.230e-82
Identity = 136/318 (42.77%), Postives = 207/318 (65.09%), Query Frame = 0
Query:   35 SGIHLPVQFRQISQQVLNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIPTGHSCSVTAKVRHTHFGAHFSSSSTLDLS-GNSLSEALALALKLPVRANGRVDVRQRFGYRFLGKCKRLGRDTFALKADASTTADVVVGFALNPSIKTLSSGNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTITDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLLNVAERRVEKEAKGFGEDVEQKLNEELRQALKLGADGKRKFVIKSNILELINTA 351
            S + +P   +QIS +VL C +S+PL RA+C V    VN+ L   G+ I ++G+LF++DD   +RI TGHSCSVTA++R     A F + + LD   G++LSE + L++K+P+R   + D++QRFG +  G+CKRLG D+F+++A  STTADV++G  LNPS     SG + +T+ PV A LF+  N D DF V  +S +T ++  ++GF SS+   ITD+F G+ +K        S+++DLG PI+  V  LPR   DLIF+ L +V +R VEK A+G+G D E+ +N ++R A++  ++G R+FV+   IL  I+TA
Sbjct:   37 STLSIPQSGKQISAEVLECSTSNPLKRALCQVVARKVNSSLADAGIQIDRNGLLFSFDDRTHQRIDTGHSCSVTAEIRRKQATARFLTKAHLDFDYGSALSEPVVLSVKVPIRLEAKADLKQRFGAKVFGRCKRLGSDSFSVEAKLSTTADVLIGLTLNPSFLIRPSGEFVVTVKPVAAVLFDFGNTDLDFEVKGLSYVTSLVGPLLGFTSSLTEGITDLFDGRGVKDMVRNFEDSVLFDLGIPILSRVDNLPRAARDLIFNLLSDVGQREVEKRAEGYGSDFEKLINSKIRSAVRADSNGVREFVVSGEILHKIDTA 354          
BLAST of Ggra9306.t1 vs. uniprot
Match: A0A175W6L4 (Uncharacterized protein n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175W6L4_9PEZI)

HSP 1 Score: 191 bits (484), Expect = 9.890e-54
Identity = 110/301 (36.54%), Postives = 173/301 (57.48%), Query Frame = 0
Query:   51 LNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIPTGHSCSVTAKVRHTHFGAHFSSSSTLDLSGNSL--SEALALALKLPVRANGRVDVRQRFGYRFLGKCKRLGRDTFALKADASTTADVVVGFALNPS-IKTLSSGNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTITDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLL-NVAERRVEKEAKGFGEDVEQKLNEELRQALKLGADGKRKFVIKSNILEL 347
            L C   D  +RA+C V    V+A L +  + + + G+LF YDDP D++I TGHSC+VTA V+HTH  A   + ++LD SGN L  S+      +LPV    RVDV+QRFG R LG C  LG D+F +     T A V + F   P+ ++T + G+Y  T+ P++    +LEN D DF +S VS ++ +LT ++G  SS+ + +T + KG SL   +  + RS+I       V GV ++P  L D + + L  +  + +    A+ +  ++E++L   +  AL L A+G+R FVI+  +++L
Sbjct:   43 LECSKGDATVRALCSVVSHRVSAALAAARIRVDRSGILFVYDDPADRKIDTGHSCTVTASVQHTHADAKLLADASLDFSGNPLAVSDPALFVAELPVELGARVDVKQRFGTRVLGSCASLGSDSFVVSGGLQTRARVAILFTFAPALVRTDAGGDYVFTIRPIVKVAAQLENTDIDFNISGVSFLSGLLTAVLGGTSSVFKAVTHLLKGDSLGSVWADIKRSVI----DAAVGGVLSIPFDLLDNVVELLAQSYVDEKQGSVAQEYSGELEKRLRTLVSNALGLDANGERNFVIRKEVVDL 339          
BLAST of Ggra9306.t1 vs. uniprot
Match: J3PBL5 (Uncharacterized protein n=1 Tax=Gaeumannomyces tritici (strain R3-111a-1) TaxID=644352 RepID=J3PBL5_GAET3)

HSP 1 Score: 182 bits (462), Expect = 1.310e-49
Identity = 111/318 (34.91%), Postives = 178/318 (55.97%), Query Frame = 0
Query:   51 LNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIPTGHSCSVTAKVRHTHFGAHFSSSSTLDLSGNSLSEALALALKLPVRANGRVDVRQRFGYRFLGKCKRLGRDTFALKADASTTADVVVGFALNPS-IKTLSSGNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTITDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLLNVAERRVEKEAKG-----FGEDVEQKLNEELRQALKLGADGKRKFVIKSNILELINTAGKNADVFVKER 362
            L C   D  +RA+C        A L S G+ +   G++F YDD   + I TGH CSVTA+++H H      + ++LD SG     AL +A +LPV    RVDV+QRFG R LGKC  +G D+F L+   +TTA + V F L P+ ++T + GNY  T+ PV     +L + D  F +S VS +  ++T I+G  SS+++ +T I +G  L   ++++ R  + D+        GAL  P +  + D LL +  R   +E +G     +  ++E+KL   + +ALKL A+G+R FV++  +++L+   G  AD+++ +R
Sbjct:   52 LECNQDDANVRALCRAVGLKAGAALASAGIRVDARGLVFAYDDGTPRGIDTGHGCSVTAEIKHVHAETRLLADASLDFSGGGGDPALFVA-ELPVEFAARVDVKQRFGARVLGKCVNIGSDSFKLEGALATTAKMAVLFTLAPAPLRTDAQGNYVFTIRPVTKVAAQLASTDVKFNISGVSFLNGLVTAILGGTSSLVKAVTSILQGDGLGAVWKQV-RQHVLDVAVG-----GALTLPFD--LLDGLLELMARAYVEERQGAAIAAYSGEMEKKLRAAVARALKLDANGERSFVVRKEVVDLVRQFGGGADIWLPDR 360          
BLAST of Ggra9306.t1 vs. uniprot
Match: B2ADH6 (Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 1 n=2 Tax=Podospora TaxID=5144 RepID=B2ADH6_PODAN)

HSP 1 Score: 169 bits (427), Expect = 2.170e-44
Identity = 106/309 (34.30%), Postives = 171/309 (55.34%), Query Frame = 0
Query:   51 LNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIPTGHSCSVTAKVRHTHFGAHFSSSSTLDLSGN--SLSEALALALKLPVRANGRVDVRQRFGYRFLGKCKRLGRDTFALKADASTTADVVVGFALNPS-IKTLSSGNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTITDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLL-NVAERRVEKEAKGFGEDVEQKLNEELRQALKLGADGKRKFVIKSNILELINTAGKNA 355
            L C   D  ++ +C V  A VN  L +  + I + G+LF Y+DP + +I TGHSC+VTA++  T   A   + + +  SGN  SLS        LP+    R D++Q+FG R LGKC   G D+F      +T A + + F   P+ +K  ++GNY LT+ P+     +L + +  F +S VS +  ++T I+G  SSIL+ +T +FKG SLK  +  + RS+I D+ A  +L   A P  L D + + L  +V E + +     +  ++E+ L  ++ QAL L A+G+R F +K +I+EL+   G+ +
Sbjct:   58 LECSQGDATVQLLCRVVAAKVNDALAANNIKIDRSGLLFQYNDPTNVKIDTGHSCTVTAEITGTQANAKLLAEAGIKFSGNPISLSNPGIFVADLPIELWARADIKQKFGTRVLGKCIGAGSDSFNAAGSLATRAQLAILFTFAPAPLKRDAAGNYILTIRPITKVAAQLSDTNIKFNISGVSFLNGLVTAILGSTSSILKAVTHLFKGDSLKAVWNDILRSVI-DITAGTLL---ATPFDLLDNLVEMLAKSVIEEKTQALNTAYSGELEKALRAKVSQALGLNANGERSFTLKKDIVELVAILGERS 362          
The following BLAST results are available for this feature:
BLAST of Ggra9306.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IQH31.390e-14667.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II641.870e-8341.62Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IEL91.230e-8242.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A175W6L49.890e-5436.54Uncharacterized protein n=1 Tax=Madurella mycetoma... [more]
J3PBL51.310e-4934.91Uncharacterized protein n=1 Tax=Gaeumannomyces tri... [more]
B2ADH62.170e-4434.30Podospora anserina S mat+ genomic DNA chromosome 4... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..388
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..397
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:449230..450423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9306.t1Ggra9306.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 449230..450423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9306.t1 ID=Ggra9306.t1|Name=Ggra9306.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=398bp
MWITFPKSILITALVCSLFLCFSNADTLTTNQTLSGIHLPVQFRQISQQV
LNCKSSDPLLRAICDVGLATVNAELKSRGVAIRKDGVLFTYDDPKDKRIP
TGHSCSVTAKVRHTHFGAHFSSSSTLDLSGNSLSEALALALKLPVRANGR
VDVRQRFGYRFLGKCKRLGRDTFALKADASTTADVVVGFALNPSIKTLSS
GNYELTLMPVIATLFELENLDFDFRVSNVSPITPVLTFIVGFKSSILRTI
TDIFKGKSLKRTFERLGRSLIYDLGAPIVLGVGALPRPLEDLIFDSLLNV
AERRVEKEAKGFGEDVEQKLNEELRQALKLGADGKRKFVIKSNILELINT
AGKNADVFVKERSRRGPRRGPSRRDPRSNPSRERRCRGLNCRYYQEP*
back to top