Ggra9304.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9304.t1
Unique NameGgra9304.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1221
Homology
BLAST of Ggra9304.t1 vs. uniprot
Match: A0A2V3IJR4 (Glutaminase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJR4_9FLOR)

HSP 1 Score: 144 bits (364), Expect = 4.700e-32
Identity = 73/174 (41.95%), Postives = 115/174 (66.09%), Query Frame = 0
Query: 1045 DITSSMANGCKMDPRFSCDFSKQRSMERLRWAVRAGGQHACRFDALLVALCVRVAAIDGSIKRTELQELRRVYRSVMRTELSEERLQAAVDARPRLSGKEATDDVFKLVRGEHKFMSDVEKELLIEAAVKISTADGLMMAQEQKVLVVVAKALFVDPVVLHLHINFWHQKLKEG 1218
            D  SS++ GC++DPR+SCDFS+QR + RLRWA++AGG+HA  FD LL+ +CVRV  IDG +  + ++ L   Y SVM T L   RL+  +        ++A D +++LV  E   ++D EKEL++ AAVK++TA+  +  +E+ +L  + +AL VD  VL + ++ W ++LK+G
Sbjct:  423 DSLSSLSTGCRLDPRYSCDFSRQRDIARLRWALKAGGEHARNFDRLLLNICVRVGLIDGKLDSSVIKMLTSSYESVMCTHLPRGRLEGILAELEHDVAEKALDSMYELVSAEAHSLNDTEKELILAAAVKVTTANHEISDRERSILRTLCQALRVDNCVLDMRLSLWEKELKKG 596          
BLAST of Ggra9304.t1 vs. uniprot
Match: glutaminase n=1 Tax=Synechococcus sp. GFB01 TaxID=1662190 RepID=UPI00069DC7D3 (glutaminase n=1 Tax=Synechococcus sp. GFB01 TaxID=1662190 RepID=UPI00069DC7D3)

HSP 1 Score: 98.2 bits (243), Expect = 5.720e-18
Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 0
Query:  924 TTASVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGD 1042
            T A +RA ++ +GL   D RLA   A+L+ L   QP+S +Q   +    L +++R    +L I D+  FCA ++ V+  V PD SG NA YIP+LRDA  +R+GVA CSVDGQ   LGD
Sbjct:   19 TAADIRARIESSGLGGDDFRLATTMARLQELGD-QPISFEQFAAIVGDELLMVNRAFRRQLVIPDWQEFCADIETVYHHVAPDRSGNNADYIPILRDADPERWGVAVCSVDGQRIGLGD 136          
BLAST of Ggra9304.t1 vs. uniprot
Match: glutaminase A n=1 Tax=Cyanobium sp. FACHB-13342 TaxID=2692793 RepID=UPI001680A9B0 (glutaminase A n=1 Tax=Cyanobium sp. FACHB-13342 TaxID=2692793 RepID=UPI001680A9B0)

HSP 1 Score: 88.2 bits (217), Expect = 4.020e-14
Identity = 55/127 (43.31%), Postives = 69/127 (54.33%), Query Frame = 0
Query:  916 RAAGTAAPTTASVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGD 1042
            RA    A TTAS+R  L  +GL   D RLA  + QL  L    PLS +    L  P L ++ R    +L I ++  F   + Y+F  V  D SG NA YIP+LRDA  + +GVA CSVDGQ   LGD
Sbjct:   10 RAERDGAVTTASLRHHLLASGLQADDGRLAQTFQQLDRLGDG-PLSLEAFSSLVGPELLMVSRALHQQLVIPEWQDFLQDIDYLFQRVSADRSGANADYIPILRDADPELWGVAVCSVDGQRLALGD 135          
BLAST of Ggra9304.t1 vs. uniprot
Match: glutaminase A n=1 Tax=Nostoc sp. C057 TaxID=2576903 RepID=UPI0015C3F83F (glutaminase A n=1 Tax=Nostoc sp. C057 TaxID=2576903 RepID=UPI0015C3F83F)

HSP 1 Score: 88.2 bits (217), Expect = 6.340e-14
Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:  924 TTASVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGDTRDITS 1048
            T   +R  ++  G+   D RL D+  +L      + LS  + L L   N+ L+ R+   +LA+ DF  F   L  +++ V P+ SG NA YIPVLRDA  +R+GVAFCSVDGQ +  G   D  S
Sbjct:   96 TPHQIRQAIEAVGIRPDDPRLGDLGTRLVNGDLDERLSPSRFLALVASNVFLISRILRRDLAVPDFDEFRRDLDSLYELVEPNHSGANADYIPVLRDADPERWGVAFCSVDGQRYARGHVNDFFS 220          
BLAST of Ggra9304.t1 vs. uniprot
Match: A0A7T1IAP1 (Glutaminase n=1 Tax=Synechococcus sp. CBW1108 TaxID=1353147 RepID=A0A7T1IAP1_9SYNE)

HSP 1 Score: 86.3 bits (212), Expect = 1.610e-13
Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 0
Query:  924 TTASVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGD 1042
            T  +++A +  +G+   D RLA   A+L+AL   + +       L    L +L R    +L I D+  FC  ++ VF  V PD SG NA YIP+LRDA  +++GVA CSVDGQ   LGD
Sbjct:   18 TAKAIQARIASSGICLDDFRLASTMAKLKALG-ERAIDFDCFAALVGEELLMLSRAFKRQLVIPDWQEFCTDIETVFKHVAPDRSGSNADYIPILRDADPEKWGVAICSVDGQRMGLGD 135          
BLAST of Ggra9304.t1 vs. uniprot
Match: glutaminase A n=1 Tax=Synechococcus sp. 1G10 TaxID=2025605 RepID=UPI000B99B1BC (glutaminase A n=1 Tax=Synechococcus sp. 1G10 TaxID=2025605 RepID=UPI000B99B1BC)

HSP 1 Score: 85.5 bits (210), Expect = 2.860e-13
Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 0
Query:  924 TTASVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGD 1042
            T A +   ++ +G+   D RLA   A L+ L   QP+  +Q   +    L +++R    +L I D+  FC+ ++ V+  V  D SG NA YIP+LRDA  +R+GVA CSVDGQ   LGD
Sbjct:   18 TAADIGTHIENSGIGADDFRLATTIALLQKLGD-QPIDFEQFAAIVGDELLMVNRAFRRQLVIPDWQEFCSDIETVYRHVATDRSGSNADYIPILRDADPERWGVAVCSVDGQRMGLGD 135          
BLAST of Ggra9304.t1 vs. uniprot
Match: glutaminase A n=1 Tax=Polynucleobacter sp. AP-Mumm-500A-B3 TaxID=2081043 RepID=UPI001C0C0FD6 (glutaminase A n=1 Tax=Polynucleobacter sp. AP-Mumm-500A-B3 TaxID=2081043 RepID=UPI001C0C0FD6)

HSP 1 Score: 80.9 bits (198), Expect = 8.150e-12
Identity = 38/116 (32.76%), Postives = 70/116 (60.34%), Query Frame = 0
Query:  927 SVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGD 1042
            +++  + + GL   D RL  +  +L     ++P+      ++ R  L  + ++ +H+L I ++  FC ++  +F++V P+ SG+NA YIPVLRDA  +++GVA C+V GQ + +GD
Sbjct:   38 TIQQRIAKCGLSLDDYRLRTMRTRLEEYK-NKPIDIDAFTEIVREELLAVKKILSHQLVIPEWQEFCQIILKIFNEVDPNHSGRNANYIPVLRDADPEKWGVALCTVSGQRYSIGD 152          
BLAST of Ggra9304.t1 vs. uniprot
Match: glutaminase A n=1 Tax=Ancylobacter lacus TaxID=2579970 RepID=UPI001BCC02BE (glutaminase A n=1 Tax=Ancylobacter lacus TaxID=2579970 RepID=UPI001BCC02BE)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-11
Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 0
Query:  927 SVRATLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGDTRDITSSMANGCK 1055
            ++ A +  AG+   D R+A    +L AL     +      +L    L  + R+   +L I D+  FC  ++ ++D+V PD SG NA YIP+LRDA  +++GV+ CS+DGQ F  GD  DI  S+ +  K
Sbjct:   18 AILARMAEAGIGPDDHRIAGTCRKLDALGD-AAIDRAGFAELIGDELLTVSRIFRRQLIIPDWQDFCHAIRGIYDEVAPDRSGANADYIPILRDADPEKWGVSICSIDGQRFSCGDV-DIYHSIQSVSK 144          
BLAST of Ggra9304.t1 vs. uniprot
Match: A0A485KWG7 (Glutaminase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWG7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.310e-11
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 0
Query:  931 TLQRAGLLDGDARLADVYAQLRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVFDDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGDTRD 1045
            TL+  GLL+ D RL  +   ++ L     LS +Q   +      LL +     L I  F++FC  L  +F+D + + +G  A YIP L +   ++FG+A C+VDGQ F LGD++D
Sbjct:  291 TLRENGLLENDPRLKQLVENVKLLGADATLSYEQYRYMTESGAILLEKALARALTIPHFNSFCDELIDIFEDSKQNKAGHIATYIPQLANVDPEKFGMAVCTVDGQRFSLGDSKD 405          
BLAST of Ggra9304.t1 vs. uniprot
Match: A0A2V3IL62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL62_9FLOR)

HSP 1 Score: 78.2 bits (191), Expect = 9.550e-11
Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = 0
Query:   27 LSDHPGIVVAAYVAVFLPWGMLALLDLINERWKTIRRIFIEGAIQITIAVPTIPYTIWYICLQGA--DRDYKEMCAAIVAVCLSAFHFARTSWGLWQAYRYWKWVKFCMNHLQEHGYTLD 144
            L +  G V   Y+ V +PW +L  +D I+ +W++I    + G I + I    I   I Y+ LQ      DYKEM  AI A+ LSA+H ART WGL Q + + +W       L+   Y  D
Sbjct:    5 LGESIGFVSGVYLVVLIPWTILYTVDFISAKWESIGSTMVNGWIHLVIITIPISSIIAYVVLQTQLPQPDYKEMYTAITALILSAYHLARTVWGLRQLHYFREWAAAVETILESASYNCD 124          
The following BLAST results are available for this feature:
BLAST of Ggra9304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJR44.700e-3241.95Glutaminase n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
glutaminase n=1 Tax=Synechococcus sp. GFB01 TaxID=1662190 RepID=UPI00069DC7D35.720e-1844.54glutaminase n=1 Tax=Synechococcus sp. GFB01 TaxID=... [more]
glutaminase A n=1 Tax=Cyanobium sp. FACHB-13342 TaxID=2692793 RepID=UPI001680A9B04.020e-1443.31glutaminase A n=1 Tax=Cyanobium sp. FACHB-13342 Ta... [more]
glutaminase A n=1 Tax=Nostoc sp. C057 TaxID=2576903 RepID=UPI0015C3F83F6.340e-1439.20glutaminase A n=1 Tax=Nostoc sp. C057 TaxID=257690... [more]
A0A7T1IAP11.610e-1340.34Glutaminase n=1 Tax=Synechococcus sp. CBW1108 TaxI... [more]
glutaminase A n=1 Tax=Synechococcus sp. 1G10 TaxID=2025605 RepID=UPI000B99B1BC2.860e-1339.50glutaminase A n=1 Tax=Synechococcus sp. 1G10 TaxID... [more]
glutaminase A n=1 Tax=Polynucleobacter sp. AP-Mumm-500A-B3 TaxID=2081043 RepID=UPI001C0C0FD68.150e-1232.76glutaminase A n=1 Tax=Polynucleobacter sp. AP-Mumm... [more]
glutaminase A n=1 Tax=Ancylobacter lacus TaxID=2579970 RepID=UPI001BCC02BE1.020e-1135.66glutaminase A n=1 Tax=Ancylobacter lacus TaxID=257... [more]
A0A485KWG73.310e-1135.65Glutaminase n=1 Tax=Aphanomyces stellatus TaxID=12... [more]
A0A2V3IL629.550e-1135.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012338Beta-lactamase/transpeptidase-likeGENE3D3.40.710.10coord: 980..1056
e-value: 1.1E-14
score: 56.1
IPR012338Beta-lactamase/transpeptidase-likeSUPERFAMILY56601beta-lactamase/transpeptidase-likecoord: 990..1047
IPR015868GlutaminasePFAMPF04960Glutaminasecoord: 1009..1045
e-value: 3.7E-6
score: 26.3
IPR015868GlutaminasePANTHERPTHR12544GLUTAMINASEcoord: 927..1044
IPR007791Co-chaperone DjlA, N-terminalPFAMPF05099TerBcoord: 1091..1201
e-value: 2.3E-10
score: 40.9
IPR029024TerB-likeGENE3D1.10.3680.10coord: 1084..1204
e-value: 1.4E-9
score: 39.9
IPR029024TerB-likeSUPERFAMILY158682TerB-likecoord: 1088..1209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..733
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..730
NoneNo IPR availablePANTHERPTHR12544:SF29GLUTAMINASE, ISOFORM Hcoord: 927..1044
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..1220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..53
NoneNo IPR availableCDDcd07176terBcoord: 1087..1197
e-value: 1.68143E-10
score: 57.6186
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 32..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:426763..435529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9304.t1Ggra9304.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 426763..435529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9304.t1 ID=Ggra9304.t1|Name=Ggra9304.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1221bp
MNECALDFSDGCKQAVCDLVDKECDNLSDHPGIVVAAYVAVFLPWGMLAL
LDLINERWKTIRRIFIEGAIQITIAVPTIPYTIWYICLQGADRDYKEMCA
AIVAVCLSAFHFARTSWGLWQAYRYWKWVKFCMNHLQEHGYTLDNPFGNR
SNDKELNRKSLSMRVNSSMIDNEFRECDVQFEFNFLRLVRPHEWFSSEEP
WFAPRHFENSCIRYMIPFLAQFGKGWLRDCVKAKCIIHDDEKKGQFKRTY
AVINALMLTTGSSCNSEKDRIALNWSNLWSTIILCQKPLTIQEFRNGMMM
PFGASAEISEAGADKQAFRSESNSQVLRSGNGDQLQADVKSRTSSTNRVH
GNMLDFRYWNFHRAAYEKHPAIWDATISDRGTFRRVSDYSERRIVEYTIH
SDNIGALHLGVFFSGSGSPSCSEMDLSFNYKELCADNGQPREVYGGRKVI
PRCRIQQEHWHRWNLPKSAPPALLDIDLASILYGGGDVIFIGYIMETVRD
CLAKWTQLQKPNYMETNVWSPKIRDGAYVEFYLSDEFSRVVTSALYTLSV
SSALNERLIWECQNHLLGLVQNDECAYGPSDLELMFLCLLGLPILRPTTK
RNEVVIDLPYNLFDSSFGNFKAIISWDRKSRKIRMEIIHCDETWRDSLGE
VYGLRDTGFKFEWAYWIHVFEAGMKVLRKEYGDKDLVPLGAEKEGVRDSH
GKESETEVDAASDDGNKAEHSTDEVTREESNVDGAPVSTGCSCGCEYRLN
TKATKKFITDDHGVTKYYWEWEGWRPQPAFKEGRYPILHDVKTREQQHGR
ADADGTGEQVVGAEGGAGVGDGDGDGERTRARSPPVAVCPPTANAPQRLL
HPIHLHPQVPPPLLSLAYTADSRVHRPAYTAAAHPPQRASAMSPSFSPAA
AAALSCDAADLTHGLRAAGTAAPTTASVRATLQRAGLLDGDARLADVYAQ
LRALPPHQPLSEQQLLQLARPNLTLLHRVATHELAIADFSAFCAMLQYVF
DDVRPDASGQNAQYIPVLRDAPSDRFGVAFCSVDGQFFELGDTRDITSSM
ANGCKMDPRFSCDFSKQRSMERLRWAVRAGGQHACRFDALLVALCVRVAA
IDGSIKRTELQELRRVYRSVMRTELSEERLQAAVDARPRLSGKEATDDVF
KLVRGEHKFMSDVEKELLIEAAVKISTADGLMMAQEQKVLVVVAKALFVD
PVVLHLHINFWHQKLKEGAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012338Beta-lactam/transpept-like
IPR015868Glutaminase
IPR007791DjlA_N
IPR029024TerB-like