Ggra9288.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9288.t1
Unique NameGgra9288.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length404
Homology
BLAST of Ggra9288.t1 vs. uniprot
Match: A0A2V3IEG8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEG8_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 1.210e-31
Identity = 90/309 (29.13%), Postives = 148/309 (47.90%), Query Frame = 0
Query:   40 LLSQRTKEVRNRNTNETL-------------VEVEGGFLQSKLVLDNKDVRAIVKGSMATDQALVFTLSFLNNWT-PEATSGIHVADPMHTAGWWEKRL-----TSKCEEKKLRRQVTGSTGYHRRCHEMMWCSEISLLFLTGSNHWSLAVVYNLSSLLNYFKSYGWRLKPGTVK--KKVKASIIYLDSLGLD-SPHIDLS-----VLIRKYCGVH-------------------VQRDLECGFYASFNASFVSKNLALFRNGGTKHIIRDLKTFYATYSFSEYHLLLQNRLRALTAAYTRNLKMVIRC 302
            + SQ   ++ N  TN+ L             +   GGFLQ+   L  ++VR+I + SMA+DQ ++FTLSFLN+WT P +   +++ DP   AGWW+  L     T  C   K++     ST      H+ +W S++S++ L G NHW+L    NL  LL   +     LK    +  K+ +A++  +DS+  + SPH  LS      L   Y G +                   +Q+DLECGF+ +++   +SK ++ F NG    + +  K +Y     + Y   +++R+ AL   +  N +  + C
Sbjct:  375 VFSQVCAQLHNNTTNKDLNSSRKPNHPHKPILAATGGFLQTTFSLSQQEVRSIQECSMASDQTIMFTLSFLNSWTEPSSKKEMYIMDPQLVAGWWDTVLRKGSSTLDCLSGKVKDFRNTSTKRKSNPHDKIWTSKLSIVMLCGHNHWTLVAFANLPLLLETLERAPHMLKRSHKQQLKQCRATMFCVDSMSANNSPHAPLSENIVHYLTASYPGQNFVSFRLLSSLVTAHHLRRSIQQDLECGFFTTYHIEIISKQISTFLNGSEMDVQKHFKLWYTKVPLTHYADCIRHRMEALMHTFEENRQAPVPC 683          
BLAST of Ggra9288.t1 vs. uniprot
Match: A0A2V3ITU8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITU8_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 1.020e-29
Identity = 93/326 (28.53%), Postives = 157/326 (48.16%), Query Frame = 0
Query:   15 RLEVVRRVKEELFLSTNPTTIDTLKLLSQRTKEVRN-----RNTNETLVEVEGGFLQSKLVLDNKDVRAIVKGSMATDQALVFTLSFLNNWT-PEATSGIHVADPMHTAGWWEKRLTSKCE-----EKKLRRQVTGSTGYHRRCHEMMWCSEISLLFLTGSNHWSLAVVYNLSSLLNYFKSYGWRLKPGTVK--KKVKASIIYLDSLGLD-SPHIDLS-----VLIRKYCGVHV-------------------QRDLECGFYASFNASFVSKNLALFRNGGTKHIIRDLKTFYATYSFSEYHLLLQNRLRALTAAYTRNLKMVIRC 302
            R+ +V  VK E F +  PTT+   +L +  T +  N      + ++ ++    GFLQ+ L L  ++VR+I   SMA+DQ ++FT SFLN+WT P +   +++ DP   A WW+  L            K+R     ST      H+ +W S++S++ L G NHW+L    NL  LL   +     LK    +  K+ +A+++ +DS+  + SPH  LS      L   Y G +V                   Q+ LECGF+ +++   +SK ++ F NG    + +    +Y  + F+ Y   +++R+ AL   +  N +  + C
Sbjct:  451 RIRIVNMVKNEFFQA--PTTLVCAQLHNNTTNKDLNSSGKPNHPHKPVLAATRGFLQTTLSLSQQEVRSIHDCSMASDQTIMFTFSFLNSWTEPSSKKEMYILDPQLVAAWWDTVLREGSSTLDRLSAKVRDFRNTSTKRKSNPHDKIWTSKLSIVMLCGHNHWTLVAFANLPLLLERLERAPHMLKRSHKQQLKQYRATMLCVDSMSANHSPHALLSQKIVHYLTASYPGQNVVSFRLLSSLVTTHHLRRSIQQHLECGFFTTYHIEIISKQISTFLNGSEMDVQKHFNIWYTKFHFTHYVDCIRHRMEALMHTFEENGQAPVPC 774          
BLAST of Ggra9288.t1 vs. uniprot
Match: A0A2V3IC62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC62_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 8.500e-24
Identity = 72/255 (28.24%), Postives = 118/255 (46.27%), Query Frame = 0
Query:   84 MATDQALVFTLSFLNNWT-PEATSGIHVADPMHTAGWWEKRLTSKCE--------EKKLRRQVTGSTGYHRRCHEMMWCSEISLLFLTGSNHWSLAVVYNLSSLLNYFKSYGWRLKPGTVK--KKVKASIIYLDSLGLD-SPHIDLSVLIRKYCGVH------------------------VQRDLECGFYASFNASFVSKNLALFRNGGTKHIIRDLKTFYATYSFSEYHLLLQNRLRALTAAYTRNLKMVIRC 302
            MA+DQ ++FTLSFLN+WT P +   +++ D    AGWW+  L   CE          K++     ST      H+ +W S +S++ L G NHW+L    NL  LL   +     LK       K+ +A++  +DS+  + SPH  LS  I  Y                            +Q+DLECGF+ +++   +SK ++ F NG    + +    +Y  + F+ Y   +++R+ AL   +  N +  + C
Sbjct:    1 MASDQIIMFTLSFLNSWTEPSSKKEMYILDLQLVAGWWDTVL---CEGSSTLDRLSAKVKDFRNKSTKRKSNPHDKIWTSNLSIVMLCGHNHWTLVAFANLPLLLERLERVPHMLKRSHKPELKQCRATMFCVDSMSANNSPHAPLSENIVHYLTTSYPKQNVVSFRLLSSLVTAHHLRRSIQQDLECGFFTTYHIEIISKQISTFLNGSEMDVQKHFNLWYTKFPFTHYADCIRHRMEALMHTFEENGQAPVPC 252          
The following BLAST results are available for this feature:
BLAST of Ggra9288.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEG81.210e-3129.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITU81.020e-2928.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC628.500e-2428.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..343
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 69..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000190_piloncontigtig00000190_pilon:67028..68308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9288.t1Ggra9288.t1Gracilaria gracilis GNS1m malemRNAtig00000190_pilon 67028..68308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9288.t1 ID=Ggra9288.t1|Name=Ggra9288.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=404bp
MKAKGAVLVDVVSSRLEVVRRVKEELFLSTNPTTIDTLKLLSQRTKEVRN
RNTNETLVEVEGGFLQSKLVLDNKDVRAIVKGSMATDQALVFTLSFLNNW
TPEATSGIHVADPMHTAGWWEKRLTSKCEEKKLRRQVTGSTGYHRRCHEM
MWCSEISLLFLTGSNHWSLAVVYNLSSLLNYFKSYGWRLKPGTVKKKVKA
SIIYLDSLGLDSPHIDLSVLIRKYCGVHVQRDLECGFYASFNASFVSKNL
ALFRNGGTKHIIRDLKTFYATYSFSEYHLLLQNRLRALTAAYTRNLKMVI
RCAANVEDVDDTPGQRQAENQKDCNAETASNGENASSSGVTDNKTRTGFL
HIAREGERLVGDVSDQHLIRQWEECVSKAAALVKEMEGRSPSQRAPSDNV
QHK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf