Ggra9250.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9250.t1
Unique NameGgra9250.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1058
Homology
BLAST of Ggra9250.t1 vs. uniprot
Match: A0A2V3IE39 (KIX_2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE39_9FLOR)

HSP 1 Score: 340 bits (872), Expect = 1.160e-95
Identity = 186/259 (71.81%), Postives = 209/259 (80.69%), Query Frame = 0
Query:  797 AAATTGV-DVSKLAPGRQAQGQKRSEMDAPGKMAQIMGLVKDISGQVSFLEQSWETEAKRQKSERIQITLAALRNSASASACDEAEKRGKKRKGSLADVANYEGGDGVIETKTVFECSPESGLRLAKKARHEAGDMQLLREAVKMDVKAAKERNALLKVWIVEEFGHPVVMCMLNIEEMRLPKLMLRVQRGYPRKGGATYGFERPPMGWVGLVEVVRKRFKKVLSISPAASVGVAAILDAWASQAEAVFNGSEMSDQTK 1054
            A A TGV       P       +R EM A  K+ QI  +VK++S Q   LEQ++E EAKRQKSERIQITLAALRNS+SASA DEAEKRG KRK SLADV NYE  DGVIETKTVFECSPE+GLRLAK+ R+EAGDMQL+R+AVKMDV+AAKERN  L V I+EEFG PVV CML I  +R PKL+LRVQRGYPRKGGATYGFERPPMGWVG++E VR RFK+VLSISPAASVGVAAILDAWAS+A+AV NGSE+SD  K
Sbjct:  961 ATAATGVTSAPPQVPXAAQPRDRRPEMSAQQKLQQIDNMVKEVSQQAHQLEQAYEMEAKRQKSERIQITLAALRNSSSASASDEAEKRGAKRKSSLADVENYEAADGVIETKTVFECSPETGLRLAKRPRNEAGDMQLMRDAVKMDVEAAKERNPSLSVEIIEEFGLPVVKCMLRIPGIRFPKLVLRVQRGYPRKGGATYGFERPPMGWVGILEQVRSRFKQVLSISPAASVGVAAILDAWASEADAVVNGSEVSDAKK 1219          
BLAST of Ggra9250.t1 vs. uniprot
Match: R7QI30 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI30_CHOCR)

HSP 1 Score: 246 bits (628), Expect = 5.530e-64
Identity = 133/236 (56.36%), Postives = 175/236 (74.15%), Query Frame = 0
Query:  818 KRSEMDAPGKMAQIMGLVKDISGQVSFLEQSWETEAKRQKSERIQITLAALRNSASASACD-EAEKRGKKRKGSLADVANYEGGDGVIETKTVFECSPESGLRLAKKARHEAGDMQLLREAVKMDVKAAKERNALLKVWIVEEFGHPVVMCMLNIEEMRLPKLMLRVQRGYPRKGGATYGFERPPMGWVGLVEVVRKRFKKVLSISPAASVGVAAILDAWASQAEAVFNGSEMSDQ 1052
            K SEM    +  +   LV +   Q    ++   +E  R K ERI  TLAALRNS+S    D E + +G+KR+ SL DV N+   DGVI++K VFECS E+GLRLAK+ R+EA +++ LREAV+ D KAA+ERN LL + I+EEFG PVV C+LNI+E+RLPKL+LRVQRGYPRKGGATYGFERPPMGWV +++ +R RFK+ L+ +PA+SVGVAA L+AWA +A+AV NGS +S++
Sbjct:  802 KISEMATQLQYQKTERLVHEAVQQAREYQERAGSEQNRTKLERIHNTLAALRNSSSIKGSDVEGKNKGRKRQASLVDVDNFGDKDGVIKSKAVFECSSEAGLRLAKRPRNEAQELKSLREAVEADCKAAQERNPLLMIDIIEEFGQPVVTCLLNIQEIRLPKLILRVQRGYPRKGGATYGFERPPMGWVDVLDEIRTRFKRALATAPASSVGVAAFLEAWAREADAVINGSYLSEE 1037          
BLAST of Ggra9250.t1 vs. uniprot
Match: A0A7S0BIY3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIY3_9RHOD)

HSP 1 Score: 150 bits (378), Expect = 2.760e-34
Identity = 89/203 (43.84%), Postives = 126/203 (62.07%), Query Frame = 0
Query:  841 QVSFLEQSWETEAKRQKSERIQITLAALRNSASASACDEAEKRGKKRKGSLADVANYEGGDGVIETKTVFECSPESGLRLAKKARHEAGDMQLLREAVKMDVKAAKERNALLKVWIVEEFGHPVVMCMLNIEEMRLPKLMLRVQRGYPRKGGATYGFERPPMGWVGLVEVVRKRFKKVLSISPAASVGVAAILDAWASQAEAV 1043
            QV  L+Q  + E KR KSERIQ TL ALRN +               + ++   +N+      I ++ VFECS + GLRLAKK +  A D + L++AV  + +    +   L++ I  EF  PVV+C L I +  +P L++ V +GYPRKG A+Y F RPPMGW+G+   VR+RF++VL+ SPA+S+GVAAILD WA +AE+V
Sbjct:  336 QVQKLDQFVDAEMKRGKSERIQNTLHALRNPSKVEMSSNGLLGAGNPEIAILSPSNF------ISSRVVFECSVD-GLRLAKKPKTHADDGKTLKDAVNTECEEVVRKIPHLQLTIKNEFNLPVVVCRLRIMDHSMPTLVIHVSKGYPRKGSASYAFRRPPMGWLGVSRKVRERFREVLATSPASSLGVAAILDNWAREAESV 531          
BLAST of Ggra9250.t1 vs. uniprot
Match: A0A7S2ZUU5 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZUU5_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 2.520e-32
Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 0
Query:  828 MAQIMGLVKDISGQVSFLEQSWETEAKRQKSERIQITLAALRNSASASACDEAEKRGKKRKGSLADVANYEGGDGVIETKTVFECSPESGLRLAKKARHEAGDMQLLREAVKMDVKAAKERNALLKVWIVEEFGHPVVMCMLNIEEMRLPKLMLRVQRGYPRKGGATYGFERPPMGWVGLVEVVRKRFKKVLSISPAASVGVAAILDAWASQAEAV 1043
            +A +   V+    QV  L++  + E KR KS+RIQ TL ALRN +               + ++    N+      I ++ VFECS + GLRLAKK +  A D + L++AV  +      +   L++ +  EF  P+V+C L I E  +P L+L V +GYPRKG A+Y F RPPMGW+ +   VR+RFK+ L+ SPA+S+GVAAILD WA +AE+V
Sbjct:  626 LAHVSERVQMAVEQVQKLDEFVDAEMKRVKSDRIQNTLQALRNPSKVEMSSSGLLGAGNPETAIMSPNNF------ISSRVVFECSVD-GLRLAKKPKTHADDCKSLKDAVNTECDEVVRKIPHLQLTVKNEFNLPIVVCRLRIMEHSMPTLILHVSKGYPRKGSASYAFRRPPMGWLSVSRKVRERFKEALATSPASSLGVAAILDTWAREAESV 834          
BLAST of Ggra9250.t1 vs. uniprot
Match: A0A1X6NTB3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTB3_PORUM)

HSP 1 Score: 141 bits (355), Expect = 3.630e-30
Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = 0
Query:  903 VIETKTVFECSPESGLRLAKKARHEAGDMQLLREAVKMDVKAAKERNALLKVWIVEEFGHPVVMCMLNIEEMRLPKLMLRVQRGYPRKGGATYGFERPPMGWVGLVEVVRKRFKKVLSISPAASVGVAAILDAWASQAE 1041
            VI++KTVFECS ++GLRLAK+ R  + D+  LRE V  +V+AA  R   +KV I  EFG PVV   L    +RLP+L++RV RGYPRKG A   FERPP+GWV  +  VR  F   ++ +PAA+VGVA  LDAWA QA+
Sbjct: 1478 VIQSKTVFECSADAGLRLAKRPRLASADLVALREVVDGEVRAALSRRPAMKVSISTEFGLPVVRAALRTPSLRLPRLVIRVPRGYPRKGSAAVAFERPPLGWVDDLIAVRTGFVDAIAAAPAAAVGVATALDAWARQAD 1616          
The following BLAST results are available for this feature:
BLAST of Ggra9250.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IE391.160e-9571.81KIX_2 domain-containing protein n=1 Tax=Gracilario... [more]
R7QI305.530e-6456.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0BIY32.760e-3443.84Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZUU52.520e-3240.74Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NTB33.630e-3053.24Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 416..479
NoneNo IPR availableCOILSCoilCoilcoord: 739..759
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..431
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 431..494
IPR036546Mediator complex subunit 15, KIX domainPFAMPF16987KIX_2coord: 9..85
e-value: 4.1E-10
score: 39.6
IPR036529Coactivator CBP, KIX domain superfamilyGENE3D1.10.246.20Coactivator CBP, KIX domaincoord: 9..88
e-value: 1.1E-8
score: 37.1
IPR028544Protein CASC3PANTHERPTHR13434PROTEIN CASC3coord: 423..820

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:588763..593250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9250.t1Ggra9250.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 588763..593250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9250.t1 ID=Ggra9250.t1|Name=Ggra9250.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1058bp
MEQQPPQAAWKHEMAKEDRIKVCQHILDKLVEATGPHSDHENLKMQTRRF
EIGVFSSASSRQDYLEKIAEGLSRIEQSQRNRSNQMNMSAQQGAAAAAAA
AAAAAAQGAQPAQQGVSAVQQPNAQNKPQETARKSNSASKRSPSGAEGKK
KPNASAAKTTAAPPPVSAPAASRAKAQLPNVPADTETLRRALQMNANQAV
FTNPQAALANLSTNARQEYMRSLAAQQAAQIPITSQAQVSAAFQAAAHQP
VTSQQVSQAQQFSQAGVVPDMSVAQQQASQALSASMASRVSQGLHHGVNV
QAPNPMMMNARANAVSNQFELIARTARGLGLNVTAEQLSRCSREQMAQFL
NLLRTQSAVSNNAAAALRQQDLARMNEAQAHIDMNAAAIDSINAAKWMGN
KATAAGQGLMNAANNRNVAREKHKQVQRSLQQQQQEQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSAAVHGNVAQLGTQAKRTAGM
TPAQLKALLSNQKIKQEKATAMPRDKQQATAQAARALAGANAGMVPNNVA
MGSIAAVTSEAMATGDKQAVSVSAQDEQFWNKLEEIQRKYMGPLNQLVPI
IREIQHKDSPSKQHFFKFLHDCVTVLKLKRGPHKPDKLDYGVLLRTEDYL
NKLIQLYTVNQAKRGPNMREGLESNAAAVAAATAAVGGKAVGQSSTAQAA
LSMQGARGKSDVAAGHAGMARLDGAQMAQQTQQAATLSQQQAAQQKAQQQ
ARVQQLQQQQNYQYLHQQQRIKLLNELQANAQMQSAVHAGQARAGVAAAT
TGVDVSKLAPGRQAQGQKRSEMDAPGKMAQIMGLVKDISGQVSFLEQSWE
TEAKRQKSERIQITLAALRNSASASACDEAEKRGKKRKGSLADVANYEGG
DGVIETKTVFECSPESGLRLAKKARHEAGDMQLLREAVKMDVKAAKERNA
LLKVWIVEEFGHPVVMCMLNIEEMRLPKLMLRVQRGYPRKGGATYGFERP
PMGWVGLVEVVRKRFKKVLSISPAASVGVAAILDAWASQAEAVFNGSEMS
DQTKVTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036546MED15_KIX
IPR036529KIX_dom_sf
IPR028544CASC3