Ggra9248.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9248.t1
Unique NameGgra9248.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length92
Homology
BLAST of Ggra9248.t1 vs. uniprot
Match: A0A2V3IE49 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE49_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 5.890e-52
Identity = 74/87 (85.06%), Postives = 81/87 (93.10%), Query Frame = 0
Query:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEMLCEGHSEGRGPERYGYQRKYLGFPPQKRAED 87
            MAGGMGVRKNVHIEEWAGFRENCEHVFKFS+ANWARLAV+GIAVP+GLYVWITKEML EGHS G GPER GYQRKY+GFPP ++ E+
Sbjct:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSKANWARLAVFGIAVPVGLYVWITKEMLSEGHSVGLGPERLGYQRKYMGFPPAEKKEE 87          
BLAST of Ggra9248.t1 vs. uniprot
Match: R7Q7K6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7K6_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 4.850e-32
Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEMLCEGHSEGRGPERYGYQRKYL 77
            M GGMGVRKN+HIEEWA FRENCEHVFKFSR NWARLAV+G AVP   Y  IT+E+  EGH  G  P R G Q +Y 
Sbjct:    1 MVGGMGVRKNIHIEEWAAFRENCEHVFKFSRGNWARLAVFGFAVPALAYYGITRELRLEGHPVGNNPRRQGAQFRYF 77          
BLAST of Ggra9248.t1 vs. uniprot
Match: A0A1X6P301 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P301_PORUM)

HSP 1 Score: 74.3 bits (181), Expect = 2.300e-15
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    5 MGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEMLCEGHSE-GRGPERY-GYQRKYLG 78
            M  +KNVHIE WA FRENCEHVF+ S  N +   V G+AVP  +Y  +  E +   H E GRG E+Y G+ R++LG
Sbjct:   18 MAAKKNVHIENWASFRENCEHVFEVSLKNLSIFGVAGVAVPYCIYRTVIDEQM---HKEQGRGAEQYIGHTRRFLG 90          
BLAST of Ggra9248.t1 vs. uniprot
Match: A0A022QQT1 (Uncharacterized protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QQT1_ERYGU)

HSP 1 Score: 65.5 bits (158), Expect = 3.100e-12
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEMLCEGHSEGRGPERYGY 72
            M GGM +RKN  IEEWA  REN EH F+++R N A   ++GIAVP+ +Y  I K+   +    GR   ++ +
Sbjct:    1 MGGGMEMRKNHWIEEWATARENLEHHFRWTRRNLALAGIFGIAVPVLVYKGIVKDFHMQDEDAGRPHRKFWF 72          
BLAST of Ggra9248.t1 vs. uniprot
Match: A9SZZ3 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SZZ3_PHYPA)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-11
Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEMLCEGHSEGRGPERYGYQRKYLG 78
            MAGGMGV KN HIE+W   REN E  F+F+R N     V+GIAVP   Y  +T E     H++    E+    RK+LG
Sbjct:    1 MAGGMGVVKNKHIEDWGTARENLEKAFRFTRRNITIALVFGIAVPFLTYQGVTGEF----HNQDMAAEKP--PRKFLG 72          
BLAST of Ggra9248.t1 vs. uniprot
Match: A0A022QNV8 (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QNV8_ERYGU)

HSP 1 Score: 63.5 bits (153), Expect = 1.610e-11
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEMLCE 59
            M GGM +RKN  IEEWA  REN EH F+++R N A   ++GIAVP+ +Y  I ++  C+
Sbjct:    1 MGGGMEMRKNHWIEEWATARENLEHHFRWTRRNLALAGIFGIAVPVLVYKGIYRQRFCQ 59          
BLAST of Ggra9248.t1 vs. uniprot
Match: A0A022QLQ2 (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QLQ2_ERYGU)

HSP 1 Score: 62.0 bits (149), Expect = 8.350e-11
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYVWITKEML 57
            M GGM +RKN  IEEWA  REN EH F+++R N A   ++GIAVP+ +Y  I K+ +
Sbjct:    1 MGGGMEMRKNHWIEEWATARENLEHHFRWTRRNLALAGIFGIAVPVLVYKGIVKDFV 57          
The following BLAST results are available for this feature:
BLAST of Ggra9248.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IE495.890e-5285.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7K64.850e-3267.53Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P3012.300e-1550.00Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A022QQT13.100e-1243.06Uncharacterized protein n=2 Tax=Erythranthe guttat... [more]
A9SZZ31.420e-1146.15Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A022QNV81.610e-1149.15Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A022QLQ28.350e-1150.88Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35479:SF4UNNAMED PRODUCTcoord: 1..65
NoneNo IPR availablePANTHERPTHR35479UNNAMED PRODUCTcoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 34..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:578363..578724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9248.t1Ggra9248.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 578363..578724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9248.t1 ID=Ggra9248.t1|Name=Ggra9248.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=92bp
MAGGMGVRKNVHIEEWAGFRENCEHVFKFSRANWARLAVYGIAVPIGLYV
WITKEMLCEGHSEGRGPERYGYQRKYLGFPPQKRAEDSSES*
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