Ggra9219.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9219.t1
Unique NameGgra9219.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length515
Homology
BLAST of Ggra9219.t1 vs. uniprot
Match: A0A2V3IP55 (Unconventional prefoldin RPB5 interactor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP55_9FLOR)

HSP 1 Score: 399 bits (1026), Expect = 7.390e-131
Identity = 270/539 (50.09%), Postives = 345/539 (64.01%), Query Frame = 0
Query:    4 ALNPQSALPSSESSVHERLLALESKQLAYRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFELLDEDDGEHNVAAALASSIRVPAADGNGKNGTDVKTVYGKAGTVASASQNERHKETNDD----------------TTGDKTAATRGTTPVSVLKNTTNQPSASTEKKRVRFSNPLIHPSIKSTPQPCFISPPKPKSXXXXXXXXXXXXX---------SPKLTAPDVPPTGAKAEKHEKADNASNAGGHS-KAKVMDELRSAVEKAQQQVLHDGIVNITEVYEGDEDTPSRVELPRGFEPDTRINFGDDSEEFLDMTGADNGAEEEGSSREDYLDALAEVEKESQAEEERMATEKRRGELEREKKEFGQGLAKGFFGAAPKKR--ARADQQHVPKAVAEGGDVPSTQVAKLSTASAVAAVVERKPSRKSKRRNRRPRSSASAFPPCTPTALLAPD---KTQLDALGDAXXXXXXXXXXRQTSLFLRLRGVGKDA 511
            ++ PQ+ LPSSE SVHERL+ALESKQLAYRSLS RLLELPRKLRRRALVPV PRLYLPGELVRTNEILV+LGSAGEATYFAERSAWQA+EIVR+RLGRVERGL ELLDE   E  +     +       + N ++    + +  +  +V++  Q+ R  +   D                T  D T  +    P SVL      P+   +KKRV F  PL  PS+ ++PQ CFISPPK K+   XXXXXXXXXX         S    AP+    G +    E   +AS +G +  + K+++ L+ AV +AQQQ + DGIVN TEVYEGDEDTPSRVELP GFEPD  ++F DDS+E+LD+TG +   E E  SRE+Y +AL + E+++Q EEE+   +K+  ELEREKKEFG+G +KGFFGAAPKK   A+ +Q +V + +    + PSTQ+   + ++A  AVVERKPSRKS+RRNRRPR+S  A P    TALL  +   +  ++ LGD             TS+F RLR + +DA
Sbjct:    5 SVTPQTELPSSERSVHERLMALESKQLAYRSLSRRLLELPRKLRRRALVPVAPRLYLPGELVRTNEILVLLGSAGEATYFAERSAWQAHEIVRRRLGRVERGLRELLDEMSDECMIGYVNRNR------NTNDESNPTSERIQEEGASVSAEQQSVRTDQDEGDNRDSDTGISQTSISASTDNDITDVSARAQPASVLSKHPKHPNTVAKKKRVTFREPLTSPSLNASPQKCFISPPKTKAKSQXXXXXXXXXXXXXXAVKERSSNAEAPNEMLFGDQQHHEEGPPDASASGKNDMQIKMVNALQRAVVEAQQQAMEDGIVNFTEVYEGDEDTPSRVELPAGFEPDENVSFADDSQEYLDVTGVNGNNETEQFSREEYFEALIQAERDAQIEEEQAKVQKQTTELEREKKEFGKGFSKGFFGAAPKKPEPAKTEQSNVGEPLQ--AETPSTQI---TESAASEAVVERKPSRKSRRRNRRPRTSTGASPSPMSTALLKQEEQARMDIELLGDEAAENND----EPTSMFRRLRNLQRDA 528          
BLAST of Ggra9219.t1 vs. uniprot
Match: A0A7S2ZCN3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZCN3_9RHOD)

HSP 1 Score: 72.0 bits (175), Expect = 2.180e-10
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   21 RLLALESKQLAYRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFELLDEDDGEHNVAAALASSIRVP 130
            RL ALE+++ +   +   L ++PR+    ALVP+GPR  +PG +  TNE++V+LG      YFA  SA+ A EIV++R+ R++  + EL   D    +V  +L S  R P
Sbjct:   15 RLAALEARRKSNVKVLEGLDQIPRRRTISALVPLGPRAIVPGRIKHTNEVMVLLGD----NYFANVSAYDAIEIVKRRIARIDTQIIELTSNDIPTTSVEPSLESEKRSP 120          
BLAST of Ggra9219.t1 vs. uniprot
Match: A0A7S2ZDZ1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDZ1_9RHOD)

HSP 1 Score: 72.0 bits (175), Expect = 5.060e-10
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   21 RLLALESKQLAYRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFELLDEDDGEHNVAAALASSIRVP 130
            RL ALE+++ +   +   L ++PR+    ALVP+GPR  +PG +  TNE++V+LG      YFA  SA+ A EIV++R+ R++  + EL   D    +V  +L S  R P
Sbjct:   15 RLAALEARRKSNVKVLEGLDQIPRRRTISALVPLGPRAIVPGRIKHTNEVMVLLGD----NYFANVSAYDAIEIVKRRIARIDTQIIELTSNDIPTTSVEPSLESEKRSP 120          
BLAST of Ggra9219.t1 vs. uniprot
Match: A0A812DLP2 (URI1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DLP2_SEPPH)

HSP 1 Score: 69.7 bits (169), Expect = 3.820e-9
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 0
Query:   32 YRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFEL 109
            Y++LS RLL LP K+    +VP GP  ++PG+LV TNEI+V+LG      +F ERSA QA +IV++R+   E+ L +L
Sbjct:   35 YKNLSDRLLTLPNKITHEVMVPFGPFAFMPGQLVHTNEIMVLLGD----NWFVERSAKQATQIVKRRIKSTEKQLEDL 108          
BLAST of Ggra9219.t1 vs. uniprot
Match: unconventional prefoldin RPB5 interactor-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A441A (unconventional prefoldin RPB5 interactor-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A441A)

HSP 1 Score: 67.0 bits (162), Expect = 1.350e-8
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 0
Query:   32 YRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFELLDEDD 114
            Y ++   L +LP+KL    +VP+ P  Y+PG L+ TNEI+V+LG      +FAERSA QA EI ++RL  VE  L  L  E +
Sbjct:   35 YETVEKLLTDLPKKLTHDVMVPISPLAYMPGHLIHTNEIMVLLGD----NWFAERSATQAVEIAKRRLKSVEEYLANLHKEHE 113          
BLAST of Ggra9219.t1 vs. uniprot
Match: unconventional prefoldin RPB5 interactor-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E676E20 (unconventional prefoldin RPB5 interactor-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E676E20)

HSP 1 Score: 67.0 bits (162), Expect = 2.710e-8
Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   18 VHERLLALESKQLAYRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRL 99
            V E +  L++ +  Y  L  RLL LP K     +VP GP  ++PG LV TNEILV+LG      +FAERSA QA  IVR+RL
Sbjct:   52 VEEEIAKLQTFKKDYEHLLKRLLSLPDKTAHEVMVPFGPLAFMPGHLVHTNEILVLLGD----NWFAERSAKQAAGIVRRRL 129          
BLAST of Ggra9219.t1 vs. uniprot
Match: A0A7E6ERP2 (unconventional prefoldin RPB5 interactor isoform X1 n=3 Tax=Octopus TaxID=6643 RepID=A0A7E6ERP2_OCTVU)

HSP 1 Score: 66.6 bits (161), Expect = 4.140e-8
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   32 YRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFEL 109
            Y  LS RLL LP K     +VP+G + ++PG+LV TNEILV+LG      +FAERSA QA  IV++R+  +++ + +L
Sbjct:   58 YEVLSKRLLTLPDKTTHEVMVPIGSKAFMPGQLVHTNEILVLLGD----NWFAERSAKQASNIVKRRIKSIDQQIKDL 131          
BLAST of Ggra9219.t1 vs. uniprot
Match: unconventional prefoldin RPB5 interactor-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0487DC (unconventional prefoldin RPB5 interactor-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0487DC)

HSP 1 Score: 66.2 bits (160), Expect = 4.440e-8
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   32 YRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGLFELLDEDDGEHNVAAALASS 126
            Y S+   L +LP+K     +VP+GP  ++PG+L+ TNEI+V+LG      +FAERSA QA +I ++RL  VE  L +L  E     N+ + +A S
Sbjct:   35 YESVGKLLRDLPKKTAHDVMVPIGPLAFMPGKLIHTNEIMVLLGD----NWFAERSASQAVDITKRRLKSVEEYLGDLKKEHS---NILSHMAFS 122          
BLAST of Ggra9219.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: unconventional prefoldin RPB5 interactor 1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D063A (LOW QUALITY PROTEIN: unconventional prefoldin RPB5 interactor 1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D063A)

HSP 1 Score: 66.6 bits (161), Expect = 5.450e-8
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   18 VHERLLALESKQLAYRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRL 99
            V E +L L+  +  Y  L  RL  LP K+R   +VP+G    +PG+L+ TNE+LV+LG      +FAERSA QA EIV++R+
Sbjct:   51 VREEILKLQKFKKDYELLFKRLKTLPEKIRHEVMVPLGSLAVMPGQLIHTNEVLVLLGD----NWFAERSAKQASEIVKRRI 128          
BLAST of Ggra9219.t1 vs. uniprot
Match: A7SQU2 (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SQU2_NEMVE)

HSP 1 Score: 62.8 bits (151), Expect = 8.310e-8
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   21 RLLALESKQLAYRSLSHRLLELPRKLRRRALVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLGRVERGL 106
            RL   E  +  Y +L + L  LP KL    +VP G   ++PG+L+ TNEILV+LG      +FAERSA QA EIV++R   +E  +
Sbjct:   37 RLRTWEKFKSDYETLDNTLKTLPEKLNHDIMVPFGSLAFMPGKLIHTNEILVLLGD----NWFAERSATQAREIVQRRQNDIETNI 118          
The following BLAST results are available for this feature:
BLAST of Ggra9219.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP557.390e-13150.09Unconventional prefoldin RPB5 interactor n=1 Tax=G... [more]
A0A7S2ZCN32.180e-1038.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZDZ15.060e-1038.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A812DLP23.820e-947.44URI1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
unconventional prefoldin RPB5 interactor-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A441A1.350e-844.58unconventional prefoldin RPB5 interactor-like isof... [more]
unconventional prefoldin RPB5 interactor-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E676E202.710e-848.78unconventional prefoldin RPB5 interactor-like n=1 ... [more]
A0A7E6ERP24.140e-846.15unconventional prefoldin RPB5 interactor isoform X... [more]
unconventional prefoldin RPB5 interactor-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0487DC4.440e-841.05unconventional prefoldin RPB5 interactor-like n=1 ... [more]
LOW QUALITY PROTEIN: unconventional prefoldin RPB5 interactor 1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D063A5.450e-845.12LOW QUALITY PROTEIN: unconventional prefoldin RPB5... [more]
A7SQU28.310e-843.02Predicted protein n=1 Tax=Nematostella vectensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..391
NoneNo IPR availablePANTHERPTHR15111:SF0UNCONVENTIONAL PREFOLDIN RPB5 INTERACTOR 1coord: 24..104
NoneNo IPR availablePANTHERPTHR15111RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3coord: 24..104
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 18..103
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 16..109
e-value: 1.0E-6
score: 28.6
IPR009053PrefoldinGENE3D1.10.287.370coord: 3..124
e-value: 1.9E-10
score: 42.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:413510..415054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9219.t1Ggra9219.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 413510..415054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9219.t1 ID=Ggra9219.t1|Name=Ggra9219.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=515bp
MAKALNPQSALPSSESSVHERLLALESKQLAYRSLSHRLLELPRKLRRRA
LVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLG
RVERGLFELLDEDDGEHNVAAALASSIRVPAADGNGKNGTDVKTVYGKAG
TVASASQNERHKETNDDTTGDKTAATRGTTPVSVLKNTTNQPSASTEKKR
VRFSNPLIHPSIKSTPQPCFISPPKPKSRSRKKKNTASSSSSPKLTAPDV
PPTGAKAEKHEKADNASNAGGHSKAKVMDELRSAVEKAQQQVLHDGIVNI
TEVYEGDEDTPSRVELPRGFEPDTRINFGDDSEEFLDMTGADNGAEEEGS
SREDYLDALAEVEKESQAEEERMATEKRRGELEREKKEFGQGLAKGFFGA
APKKRARADQQHVPKAVAEGGDVPSTQVAKLSTASAVAAVVERKPSRKSK
RRNRRPRSSASAFPPCTPTALLAPDKTQLDALGDADADADADEAERQTSL
FLRLRGVGKDAVRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR009053Prefoldin