Ggra9180.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9180.t1
Unique NameGgra9180.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length285
Homology
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A2V3IPA4 (Oxalate--CoA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPA4_9FLOR)

HSP 1 Score: 368 bits (945), Expect = 9.670e-126
Identity = 200/244 (81.97%), Postives = 217/244 (88.93%), Query Frame = 0
Query:   41 TIETDSTVETTPSSSAQLILDRLTRLEQSQHQMMNQLQSDHXXXXXXXXXKLQHAQSRRQHAEENALAQPLVMAVNMTEVEAAVQAASLAEQESATALEEARKVAEDARLAAGGIPQSAREATKEGDVAYGADGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALAEAQMQGDNAKLQGLPAIEQ 284
            TIETD+T E+TPS+SAQ ILDRL+RLE SQ QMM +L+SDH         KL+ AQS+R++AEE ALAQPL+MAVNMTEVEAAVQAASLAEQESA+ALEEARKVAE+ARLA+GGIPQSAREATKEGDV YGAD EYIIKKVTVNLDEVERAISIS LIS+CRAFGRPD KYGNEVYCAVVPKK VRVSERMLLIHAQKYL TAMVPKRFFFLQ+LPSGITRKALAEAQ  GD  KL GLPA+EQ
Sbjct:   40 TIETDTTPESTPSTSAQAILDRLSRLEHSQQQMMRKLKSDHDSQMAVLRDKLEQAQSKRKYAEETALAQPLLMAVNMTEVEAAVQAASLAEQESASALEEARKVAEEARLASGGIPQSAREATKEGDVGYGADSEYIIKKVTVNLDEVERAISISSLISLCRAFGRPDPKYGNEVYCAVVPKKKVRVSERMLLIHAQKYLPTAMVPKRFFFLQDLPSGITRKALAEAQAHGDMNKLVGLPAVEQ 283          
BLAST of Ggra9180.t1 vs. uniprot
Match: R7QGB0 (Acid-thiol ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGB0_CHOCR)

HSP 1 Score: 117 bits (294), Expect = 4.890e-26
Identity = 78/230 (33.91%), Postives = 125/230 (54.35%), Query Frame = 0
Query:   55 SAQLILDRLTRLEQSQHQMMNQLQSDHXXXXXXXXXKLQHAQSRRQHAEENALAQP-LVMAVNMTEVEAAVQAASLAEQESATALEEARKVAEDARLAAGGIPQSAREATKEGDVAYGADGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALAEAQMQGDNAKLQGLPAIE 283
            +A  IL RL  +E++  ++   ++  +         +++ A++  + A   +L Q   +  V + E+EAAV+AA+           EA K A +   AA G  QS     KE     GA    + K V V LD+VE A+   P +SV +AFGR D ++G EV+CA+VPK+  RVSE  L +HAQ  L   MVPK+F+++ E+P+GI+R+ L+E+ +  D +   G   ++
Sbjct:  577 TANAILARLEAIEENHRRLQQDVEGRNAAELEEMRRRVEAAEAEAERALNASLEQNGQIHDVRVEELEAAVRAAAXXXXXXXXXTREAVKAAREVADAAYGTNQSQPVEVKESTGDQGA----LTKTVRVPLDDVEAAMRNHPAVSVAKAFGRKDKRFGAEVFCAIVPKRGARVSEPWLKLHAQSVLPAPMVPKKFYYMTEMPTGISRRELSESPLLQDLSSFSGFSDVK 802          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A2V3J2Q8 (Putative peroxisomal-coenzyme A synthetase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Q8_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 1.400e-24
Identity = 75/230 (32.61%), Postives = 123/230 (53.48%), Query Frame = 0
Query:   55 SAQLILDRLTRLEQSQHQMMNQLQSDHXXXXXXXXXKLQHAQSRRQHAEENALAQPLVMA-VNMTEVEAAVQAASLAEQESATALEEARKVAEDARLAAGGIPQSAREATKEGDVAYGADGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALAEAQMQGDNAKLQGLPAIE 283
            +A  IL RL  +E++  ++ + ++  +         ++  A++  + A    + +   M  + M E+EAAV AA+ + + SA    EA K A +   A  G   S     K      GA    + K V V LD+VE A+   P + V +AFGR D ++G EV+CA+VPK+  RVSE  L +HAQ  L   MVPK+F+++ ++P GI+R+ LAE+ +  D ++  G   ++
Sbjct:  597 TANAILARLEAIEENHRRLQHDVEMRNAAEIEEMRRRVADAEAEAERAAIGGVNENGKMIDLRMEELEAAVMAAAASAESSANNTREAVKAAREVADATYGTNHSQPVEVKASTGDQGA----LTKTVRVALDDVEAAMRNHPAVDVAKAFGRKDKRFGAEVFCAIVPKRGARVSEPWLKLHAQSVLPAPMVPKKFYYISQMPQGISRRELAESPLLQDLSQFPGYSEVK 822          
BLAST of Ggra9180.t1 vs. uniprot
Match: R7QCG1 (Acid-thiol ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCG1_CHOCR)

HSP 1 Score: 92.4 bits (228), Expect = 2.420e-17
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0
Query:  172 ADGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALA 265
            AD   + K V V+LD+VE+A+++ P +++ RAFGRPD +YG EV+CA+ PK   RVSE  L +HAQ  L  A VPK+FFF ++L     R  L+
Sbjct:  691 ADPGAVQKTVLVSLDDVEKAMNMHPAVAMSRAFGRPDKRYGMEVFCAINPKAGARVSEPWLKLHAQTVLPAAFVPKQFFFKEDLTGDEERATLS 784          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A7S1XFR3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFR3_9RHOD)

HSP 1 Score: 87.0 bits (214), Expect = 5.250e-16
Identity = 55/143 (38.46%), Postives = 76/143 (53.15%), Query Frame = 0
Query:  139 EEARKVAE---DARLAAGGIPQSAREATKEGDVAYG-------------ADGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALA 265
            E+ RKV +   D RL       + ++A    + AYG              D   I KK+  NL +V+ AI+  P IS   +F R D K+ NE++CAV+PKK  R SE  L +HAQ  L   M+PKRFFF++ LP+   RK L+
Sbjct:  174 EDQRKVEQSLNDTRLGLEASQNTVKQAQIAVEKAYGPIAALDRARSDLPVDENTIRKKMIFNLRDVDAAIASHPAISNAMSFSREDDKFANEIFCAVIPKKGARASEPWLKLHAQTMLPAMMIPKRFFFVERLPTN--RKELS 314          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A1X6P2T2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2T2_PORUM)

HSP 1 Score: 85.5 bits (210), Expect = 1.010e-15
Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0
Query:  173 DGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVR---VSERMLLIHAQKYLATAMVPKRFFFLQE--LPSGITRKALAE 266
            +G+ ++K VTV LD+VERA+ +SPL+   RAFG PD KYG EVYC V     V    V+E  L++HAQ+ L  AMVP+R F +        ++R ALAE
Sbjct:  171 EGDVLVKTVTVALDDVERAMRLSPLVGKARAFGCPDVKYGYEVYCVVAVAPGVAAASVNESALMMHAQRRLPNAMVPRRIFVIDGNWKEEDLSRAALAE 269          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A7S0XIK3 (Hypothetical protein n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIK3_9RHOD)

HSP 1 Score: 85.5 bits (210), Expect = 3.420e-15
Identity = 40/96 (41.67%), Postives = 63/96 (65.62%), Query Frame = 0
Query:  173 DGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALAEAQ 268
            D   + + +TVNL++V++A+ + P +S   AFG+ D +YG +VYCAV+ +K  RVSE  L +H Q  L  AMVPK+F+ +  LP G  R+ L +++
Sbjct:  246 DSAVVERTLTVNLEDVDQAVKMHPAVSDALAFGQLDERYGMDVYCAVIVRKGARVSEGWLRLHTQTVLPAAMVPKKFYMVDRLPQG--RQELTDSE 339          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A1X6PFV0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFV0_PORUM)

HSP 1 Score: 84.3 bits (207), Expect = 1.360e-14
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0
Query:  163 TKEGDVAYGA-DGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPS--GITRKALAEAQMQGDNAKLQGLPAIEQ 284
            T   DV+  A D + + K + V+LDEVE  +   P ++  RAFG+ DS+YG +VYCA+V KK  R+SE  L +HAQ  L   MVP++FF    LPS     R +LA  +   +     GL  ++Q
Sbjct:  793 TVSRDVSVAAFDAQSVTKVIKVSLDEVEAVMRQHPAVAAVRAFGKSDSRYGYDVYCAIVAKKGARLSEAWLKLHAQSMLPATMVPRKFFACS-LPSLGAADRVSLATERALQEMNPTAGLSQVKQ 916          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A1X6P058 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P058_PORUM)

HSP 1 Score: 84.0 bits (206), Expect = 1.720e-14
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  173 DGEYIIKKVTVNLDEVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKALA 265
            D   + K V V+L++VE A+   P ++V RAFGRPD ++G+EVYCAV+ K   R+SE  LL+H Q  L  A VP+RF+ + E      R  LA
Sbjct:  625 DPNNVTKVVAVSLEDVEAAVESHPAVAVARAFGRPDPRFGSEVYCAVLVKVGGRLSEPWLLLHVQSLLPAAAVPRRFYVVDEETVVADRSVLA 717          
BLAST of Ggra9180.t1 vs. uniprot
Match: A0A371I0V1 (Oxalate--CoA ligase (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371I0V1_MUCPR)

HSP 1 Score: 60.5 bits (145), Expect = 6.730e-8
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
Query:  187 EVERAISISPLISVCRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFFFLQELPSGITRKAL 264
            EV+  +   P I+   AFG P +KYG ++YCAV+P++   V E  +L +++K +A+  VPK+ F    LP   T K L
Sbjct:   45 EVDFVLLSHPGIAQAVAFGVPHAKYGEQIYCAVIPREGSNVDEAEVLRYSKKNVASFKVPKKVFITDSLPKTATGKIL 122          
The following BLAST results are available for this feature:
BLAST of Ggra9180.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IPA49.670e-12681.97Oxalate--CoA ligase n=1 Tax=Gracilariopsis chorda ... [more]
R7QGB04.890e-2633.91Acid-thiol ligase n=1 Tax=Chondrus crispus TaxID=2... [more]
A0A2V3J2Q81.400e-2432.61Putative peroxisomal-coenzyme A synthetase n=1 Tax... [more]
R7QCG12.420e-1747.87Acid-thiol ligase n=1 Tax=Chondrus crispus TaxID=2... [more]
A0A7S1XFR35.250e-1638.46Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6P2T21.010e-1547.47Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XIK33.420e-1541.67Hypothetical protein n=2 Tax=Erythrolobus madagasc... [more]
A0A1X6PFV01.360e-1440.00Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P0581.720e-1445.16Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A371I0V16.730e-838.46Oxalate--CoA ligase (Fragment) n=1 Tax=Mucuna prur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..105
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 181..263
IPR025110AMP-binding enzyme, C-terminal domainPFAMPF13193AMP-binding_Ccoord: 187..257
e-value: 6.2E-8
score: 33.5
IPR045851AMP-binding enzyme, C-terminal domain superfamilyGENE3D3.30.300.30coord: 177..277
e-value: 1.1E-12
score: 50.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:313569..314423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9180.t1Ggra9180.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 313569..314423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9180.t1 ID=Ggra9180.t1|Name=Ggra9180.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=285bp
MVASTAAAHGAHLLDETVQQTVDDALEDTASDLTNDLERHTIETDSTVET
TPSSSAQLILDRLTRLEQSQHQMMNQLQSDHEQQMDQLRHKLQHAQSRRQ
HAEENALAQPLVMAVNMTEVEAAVQAASLAEQESATALEEARKVAEDARL
AAGGIPQSAREATKEGDVAYGADGEYIIKKVTVNLDEVERAISISPLISV
CRAFGRPDSKYGNEVYCAVVPKKNVRVSERMLLIHAQKYLATAMVPKRFF
FLQELPSGITRKALAEAQMQGDNAKLQGLPAIEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025110AMP-bd_C
IPR045851AMP-bd_C_sf