Ggra9167.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9167.t1
Unique NameGgra9167.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length161
Homology
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A2V3ILK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILK5_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 6.380e-62
Identity = 105/116 (90.52%), Postives = 115/116 (99.14%), Query Frame = 0
Query:   43 MAEKPKNPLGGXXXXXNIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPP 158
            MA+KPKNPLGGXXXXXNIMDAMKKAQEFT+VAKDLQ+QLKNTEIEASVR+GQVKVTMTAQQVP+K+EVSDDLVALGS+EVS AVTEGVIAAHSKATEYM++KMGNL+KEFGIPQPP
Sbjct:    1 MADKPKNPLGGXXXXXNIMDAMKKAQEFTTVAKDLQDQLKNTEIEASVRDGQVKVTMTAQQVPLKVEVSDDLVALGSAEVSAAVTEGVIAAHSKATEYMKQKMGNLTKEFGIPQPP 116          
BLAST of Ggra9167.t1 vs. uniprot
Match: R7QJK2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJK2_CHOCR)

HSP 1 Score: 158 bits (400), Expect = 1.430e-47
Identity = 81/98 (82.65%), Postives = 92/98 (93.88%), Query Frame = 0
Query:   61 MDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPP 158
            MDAMKKAQEFTSVAKDLQEQLKNTEIEASVR+GQV V MTAQQVPV + VSD+LVA+GS EVS+AVTEGVIAAH K++EYM+EKMG+L+K+FGIPQPP
Sbjct:    1 MDAMKKAQEFTSVAKDLQEQLKNTEIEASVRDGQVTVVMTAQQVPVSVTVSDELVAMGSDEVSKAVTEGVIAAHGKSSEYMKEKMGSLTKDFGIPQPP 98          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A1X6P4S1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4S1_PORUM)

HSP 1 Score: 123 bits (309), Expect = 6.470e-33
Identity = 60/111 (54.05%), Postives = 83/111 (74.77%), Query Frame = 0
Query:   48 KNPLGGXXXXXNIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPP 158
            KNP G      NIMDA+KKAQ+FT  AK+LQ++LK TEIEA+ REG+VKV +T QQ P+ + ++ +L+  G+  VS AVT+ V AAHS++ EYMRE++G L+ +FG+PQ P
Sbjct:   53 KNPFGALGNMGNIMDAVKKAQQFTESAKELQDELKETEIEATAREGKVKVVLTGQQTPISVTIAPELLDEGADAVSAAVTDAVKAAHSRSLEYMRERLGGLTTDFGLPQQP 163          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A7V5I9N1 (Nucleoid-associated protein ENL98_19705 n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I9N1_9BACT)

HSP 1 Score: 114 bits (284), Expect = 4.140e-29
Identity = 54/100 (54.00%), Postives = 81/100 (81.00%), Query Frame = 0
Query:   59 NIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPP 158
            N+MDAMKKAQEF+  A+ LQE+LKNTE+EA+  +G+V+  ++ QQVP+++EVSD+L+A G+  VS+AVTE V  AH K+ E MR+++ +L++ +G+PQPP
Sbjct:   66 NLMDAMKKAQEFSKSAQALQEELKNTEVEATSSDGRVRAVVSGQQVPIRVEVSDELIAEGNPAVSDAVTEAVRNAHVKSAELMRQQLADLTQSYGLPQPP 165          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A7S1TCI2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCI2_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 3.760e-26
Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 0
Query:   12 GVFSPRSSGAYRAGNKCAALRTRKLPGRFVMMAE----KPKNPLGGXXXXXNIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIP 155
            G F P    + R    C+   T       V MA+    +  NP        +IM AMKKAQ F S AK+LQ++LK TE+EAS  +G V V  T QQVP+++EV+++L++ G   VS +VTE V AAH+K+T++M+ + G LS+EFG+P
Sbjct:   40 GGFQPLVESSRRLSRVCSRRTT-------VAMADDTAGRGSNPFANLGKIGDIMGAMKKAQSFASSAKELQDELKKTELEASSEDGLVTVFYTGQQVPLRVEVAEELLSKGPEAVSASVTEAVQAAHAKSTQHMQLRFGELSQEFGVP 180          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A7S4IY66 (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IY66_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 1.240e-18
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   61 MDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPP 158
            M+ +KKAQE     K+LQE+L+NTE+EA+  +G V V ++  QVP+ + VSD+++A GS  VS AV+     AH  +  Y +E+M  L +E G+P PP
Sbjct:    1 METIKKAQEVGVKVKELQEELQNTEVEATAADGGVTVAVSGAQVPISVTVSDEVLAQGSDAVSAAVSLAAKEAHKNSMNYAKERMTELYREIGLPMPP 98          
BLAST of Ggra9167.t1 vs. uniprot
Match: R1FFN9 (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFN9_EMIHU)

HSP 1 Score: 86.7 bits (213), Expect = 1.610e-18
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   59 NIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPPQ 159
            N+M+ +KKAQE     K LQE+L NTEIEA+  +G V V ++  QVP+ ++VS+DL + G+  VS+A++  +  AH  + EY ++K+G L  E G+P PP+
Sbjct:   58 NMMETIKKAQEVGVKVKALQEELVNTEIEATAADGGVTVVISGAQVPMDVKVSEDLCSKGAEAVSDAISLAMREAHKNSMEYSKQKLGALYAEIGLPMPPE 158          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A7S3ESI0 (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ESI0_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 2.800e-17
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0
Query:   53 GXXXXXNIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPP 158
            G     N+M+ +KKAQ+     K+LQE+L NTEIEA+  EG V V+++   VP+ + VS +LVA G+  VS AVT     AH  +  Y +++M  L  E G+P PP
Sbjct:   58 GMGGGLNMMETIKKAQQVGVKVKELQEELANTEIEATAAEGGVSVSVSGANVPISVTVSPELVAQGAEAVSTAVTLATKEAHRNSMAYAKDRMTELYTEIGLPMPP 163          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A7S3MQT1 (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MQT1_9SPIT)

HSP 1 Score: 83.2 bits (204), Expect = 4.740e-17
Identity = 41/101 (40.59%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   59 NIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIPQPPQ 159
            N+M+ +KKAQE     K LQE+L NTE+EA+  +G V V ++  QVP+ ++V+D++ + G+  VS A+T+ +  AH  + EY + K+  L  E G+P PP+
Sbjct:   67 NMMETIKKAQEMGVKVKALQEELVNTEVEATSADGGVTVVISGAQVPMDVKVTDEMCSKGAKAVSAAITDAMREAHKNSMEYSKSKLTELYAEIGLPMPPE 167          
BLAST of Ggra9167.t1 vs. uniprot
Match: A0A6P0V1R2 (Nucleoid-associated protein F6J96_17050 n=8 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0V1R2_9CYAN)

HSP 1 Score: 75.9 bits (185), Expect = 7.130e-15
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0
Query:   53 GXXXXXNIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMTAQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSKEFGIP 155
            G      + +A KKAQ+    AKDLQ++L+  EIE S  +G VKV ++  Q P ++E+S+D V+ G+  +SE VT  +  A++K+T  MRE+M  L++   +P
Sbjct:   10 GLGKMKELTEAFKKAQQVQQGAKDLQDELEQMEIEGSSNDGSVKVVLSGNQEPRRVEISEDAVSQGAEALSELVTTAMKDAYNKSTATMRERMEKLTEGLNLP 112          
The following BLAST results are available for this feature:
BLAST of Ggra9167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILK56.380e-6290.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJK21.430e-4782.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P4S16.470e-3354.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7V5I9N14.140e-2954.00Nucleoid-associated protein ENL98_19705 n=2 Tax=ce... [more]
A0A7S1TCI23.760e-2642.57Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S4IY661.240e-1843.88Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
R1FFN91.610e-1843.56Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S3ESI02.800e-1742.45Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3MQT14.740e-1740.59Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A0A6P0V1R27.130e-1538.83Nucleoid-associated protein F6J96_17050 n=8 Tax=Os... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..94
NoneNo IPR availablePANTHERPTHR33449:SF1NUCLEOID-ASSOCIATED PROTEIN YBABcoord: 47..156
IPR004401Nucleoid-associated protein YbaB/EbfC familyPFAMPF02575YbaB_DNA_bdcoord: 64..150
e-value: 7.7E-16
score: 58.1
IPR004401Nucleoid-associated protein YbaB/EbfC familyPANTHERPTHR33449NUCLEOID-ASSOCIATED PROTEIN YBABcoord: 47..156
IPR036894Nucleoid-associated protein YbaB-like domain superfamilyGENE3D3.30.1310.10coord: 54..158
e-value: 1.2E-22
score: 81.9
IPR036894Nucleoid-associated protein YbaB-like domain superfamilySUPERFAMILY82607YbaB-likecoord: 64..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:282182..282921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9167.t1Ggra9167.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 282182..282921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9167.t1 ID=Ggra9167.t1|Name=Ggra9167.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=161bp
MATPQPGFISSGVFSPRSSGAYRAGNKCAALRTRKLPGRFVMMAEKPKNP
LGGLGGLGNIMDAMKKAQEFTSVAKDLQEQLKNTEIEASVREGQVKVTMT
AQQVPVKIEVSDDLVALGSSEVSEAVTEGVIAAHSKATEYMREKMGNLSK
EFGIPQPPQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004401YbaB/EbfC
IPR036894YbaB-like_sf