Ggra9166.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9166.t1
Unique NameGgra9166.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length184
Homology
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A2V3IIX1 (Protein UXT-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIX1_9FLOR)

HSP 1 Score: 190 bits (482), Expect = 1.570e-58
Identity = 106/161 (65.84%), Postives = 122/161 (75.78%), Query Frame = 0
Query:    8 TEEHDHEETDAVITSEETRVAIQNYSRALEKRLKPTLEATFSLRDDALKQLAELEQTERALRVVEKECRTSRA-RPGKPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSLQI 167
            T E DH+ +    T EE   AI  YSR LEKRL P LE TFSLRD AL QLAELEQTER LR+VE+EC +SR  + GKP  E+RVNLGENFFVRAEA+R   VVLDLGLGV  EV F EANKFVQERRQM R IAD+ TKK  ++QAMVEGV+KC++ L++
Sbjct:   10 TAEEDHQTS---ATREEADAAIDKYSRDLEKRLYPALETTFSLRDKALAQLAELEQTERGLRLVERECCSSRGGKSGKPAVETRVNLGENFFVRAEAQRTATVVLDLGLGVLAEVTFSEANKFVQERRQMLRRIADSNTKKATKMQAMVEGVMKCISGLRV 167          
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A1S8VYD1 (Prefoldin, alpha subunit n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VYD1_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 1.090e-10
Identity = 40/141 (28.37%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   29 IQNYSRALEKRLKPTLEATFSLRDDALKQLAELEQTERALRVVEKECRTSRARPGKPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSLQIHD 169
            I  Y   +  RL+  L      RD   +++A++ Q    ++V++K+       PG  + +S +N+G +FF++A+     K++L++GL VFVE+   EA KF++ R +      +  T K +EI+A ++ V+K +  +++ D
Sbjct:   11 ILRYESFVNDRLRKDLMQVLDARDKLYERIAQILQLRNQIQVIQKQ-------PGGNL-KSMMNVGCDFFMKAQIPDTSKIILNVGLNVFVEMSLEEAVKFLEIREKQLECQTEKLTSKASEIRAHIKLVLKAIEEVELLD 143          
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A7S4J974 (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4J974_GUITH)

HSP 1 Score: 57.8 bits (138), Expect = 6.080e-7
Identity = 31/134 (23.13%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   29 IQNYSRALEKRLKPTLEATFSLRDDALKQLAELEQTERALRVVEKECRTSRARPGKPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCL 162
            +  Y+  ++  L+  L +    R++ +K +  LE+    + ++++         G    ++ VN+G   +++AE      +++++GLG FVE+  +EA +FV +R ++ +  AD + K+++E+ + +E V+K +
Sbjct:   75 VDKYANFVDDVLRVKLASLIEEREEVVKDIEALEKLRSTVSLMQER--------GGGRMKTMVNVGCECYMQAEVPDTSSIMINVGLGFFVEMKLQEAVEFVDKRVELLQEKADRQGKEISEVHSQIEMVLKAI 200          
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A293LAA3 (Ubiquitously expressed transcript (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LAA3_ORNER)

HSP 1 Score: 56.2 bits (134), Expect = 7.480e-7
Identity = 41/138 (29.71%), Postives = 68/138 (49.28%), Query Frame = 0
Query:   29 IQNYSRALEKRLKPTLEATFSLRDDALKQLAELEQTERALRVVEKECRTSRARPGKPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSLQ 166
            I  Y   L   LK  L      RD     LA+L Q    ++ +++ C  +        F+S+V+LG NF+V+A  +   ++++ +GLG FVE    EA  F++ R Q+        TK  + I+A ++ V++ L  LQ
Sbjct:   10 IVQYESFLNDVLKEDLRVCLRERDKVCSHLADLLQLRTIIQRMKETCGDT--------FKSQVDLGCNFYVQACVEDTSRILVQVGLGFFVEFSHSEALLFLECREQLLNRELQRLTKDSSMIKAHIQMVLQGLRELQ 139          
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A3P8WMU2 (Protein UXT-like n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WMU2_CYNSE)

HSP 1 Score: 54.7 bits (130), Expect = 3.630e-6
Identity = 34/138 (24.64%), Postives = 72/138 (52.17%), Query Frame = 0
Query:   29 IQNYSRALEKRLKPTLEATFSLRDDALKQLAELEQTERALRVVEKECRTSRARPGKPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSLQ 166
            +  Y   +++ LK  L+     RDD  +++++  Q +  +  ++               ++ V+LG NFFV+AE + + ++++ +G G FVE+   EA +F++++     +  +  TK  A+I+A +  V++ L  LQ
Sbjct:   15 VLQYEAFIDEVLKRDLKRVLEQRDDIFEKISQYLQLKNVIHSLQGL--------DSQRLKTDVDLGCNFFVKAEVEDSSRILVAVGYGFFVEMTHNEALRFIEKKTTQLTSFTEVLTKDSAKIKANIRMVLQGLRELQ 144          
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A813LZA1 (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813LZA1_9BILA)

HSP 1 Score: 54.3 bits (129), Expect = 4.870e-6
Identity = 26/80 (32.50%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   87 FESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSLQ 166
            F+++V+LG NF+  A      K+ + +G G F+E+ F EA KF+ ++ ++    A+   +K AEI+A ++ V++ L  +Q
Sbjct:   62 FQTKVDLGCNFYANAVVDDPSKIFISIGFGFFLEMKFDEAIKFIDKKVKLLNKNAEDLDQKAAEIKANIKFVLEGLKEMQ 141          
BLAST of Ggra9166.t1 vs. uniprot
Match: protein UXT homolog n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B19B (protein UXT homolog n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B19B)

HSP 1 Score: 53.9 bits (128), Expect = 5.400e-6
Identity = 27/83 (32.53%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   84 KPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSLQ 166
            K  F+++V++G NF+++A  + A  ++LD+GLG FVE    EA   +  R ++F+   D   K++A   A ++ V+  +  LQ
Sbjct:   58 KSGFKTKVDMGNNFYIQANIEDASNILLDVGLGHFVEFSLDEALTVIDVRLKLFQRQIDNLRKQIARTNAHIKLVLIGIKDLQ 140          
BLAST of Ggra9166.t1 vs. uniprot
Match: A0A336LXH0 (Ubiquitin-like protein 5 n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336LXH0_CULSO)

HSP 1 Score: 54.7 bits (130), Expect = 7.380e-6
Identity = 28/84 (33.33%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   82 PGKPVFESRVNLGENFFVRAEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAEIQAMVEGVVKCLTSL 165
            PGK  F+++V++G NFF++A+    +K+++++GL VF+E    EA K+VQ +  +    +D    +V +I+A ++    CL +L
Sbjct:  120 PGKS-FKTQVDIGSNFFMQAKVPSKDKILVNVGLNVFIEFTLEEAEKYVQMKINILEKQSDVVRDEVCKIKANIK---LCLLAL 199          
The following BLAST results are available for this feature:
BLAST of Ggra9166.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IIX11.570e-5865.84Protein UXT-like n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1S8VYD11.090e-1028.37Prefoldin, alpha subunit n=3 Tax=Batrachochytrium ... [more]
A0A7S4J9746.080e-723.13Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A293LAA37.480e-729.71Ubiquitously expressed transcript (Fragment) n=1 T... [more]
A0A3P8WMU23.630e-624.64Protein UXT-like n=1 Tax=Cynoglossus semilaevis Ta... [more]
A0A813LZA14.870e-632.50Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
protein UXT homolog n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B19B5.400e-632.53protein UXT homolog n=1 Tax=Cephus cinctus TaxID=2... [more]
A0A336LXH07.380e-633.33Ubiquitin-like protein 5 n=1 Tax=Culicoides sonore... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..81
NoneNo IPR availablePANTHERPTHR13345MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10coord: 27..160
NoneNo IPR availablePANTHERPTHR13345:SF4PROTEIN UXTcoord: 27..160
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 56..155
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 56..155
e-value: 2.3E-12
score: 46.9
IPR009053PrefoldinGENE3D1.10.287.370coord: 21..169
e-value: 1.5E-14
score: 55.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:280911..281462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9166.t1Ggra9166.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 280911..281462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9166.t1 ID=Ggra9166.t1|Name=Ggra9166.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=184bp
MKRNKTKTEEHDHEETDAVITSEETRVAIQNYSRALEKRLKPTLEATFSL
RDDALKQLAELEQTERALRVVEKECRTSRARPGKPVFESRVNLGENFFVR
AEAKRAEKVVLDLGLGVFVEVGFREANKFVQERRQMFRNIADTETKKVAE
IQAMVEGVVKCLTSLQIHDGSKGDQEHAHHEEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR009053Prefoldin