Ggra9136.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9136.t1
Unique NameGgra9136.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length174
Homology
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A2V3IHS6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS6_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 1.050e-61
Identity = 87/117 (74.36%), Postives = 98/117 (83.76%), Query Frame = 0
Query:   57 SSEQTKAQEPMRIAMTLNIKPDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSEGDVWWQQCQLVYYQA 173
            SS+        RIAMTLNIKP  +Q+YID HAHSRP+VR AL SVGIRNLSLWNWG+RLFYYAEY+G EPFD+AMD+YSKM+GV DWE LMH YQ+K+PGSEG VWWQ CQLVYYQA
Sbjct:    3 SSDAHSNAHTKRIAMTLNIKPGQIQQYIDLHAHSRPQVRNALHSVGIRNLSLWNWGDRLFYYAEYIGDEPFDQAMDRYSKMDGVSDWEQLMHKYQQKLPGSEGHVWWQPCQLVYYQA 119          
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A6T6LEZ2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6LEZ2_9RHOD)

HSP 1 Score: 149 bits (376), Expect = 1.440e-43
Identity = 66/108 (61.11%), Postives = 88/108 (81.48%), Query Frame = 0
Query:   65 EPMRIAMTLNIKPDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSEGDVWWQQCQLVYYQ 172
            +PMRIAMTL+I+   ++EY  HH +S PEV  ALRSVG+RNLSL++W +RLFYYAEYVG+  F+EAM+KY+KM  V++WE LMH YQ+++PGS GDVWWQ  + +Y+Q
Sbjct:    3 QPMRIAMTLDIQEGKLEEYHQHHVNSWPEVENALRSVGMRNLSLYSWESRLFYYAEYVGSISFEEAMEKYAKMPRVQEWEALMHKYQKQLPGSTGDVWWQPMKEIYHQ 110          
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A1X6NJJ5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJJ5_PORUM)

HSP 1 Score: 147 bits (371), Expect = 1.270e-42
Identity = 69/115 (60.00%), Postives = 84/115 (73.04%), Query Frame = 0
Query:   65 EPMRIAMTLNIKPDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSEGD--------VWWQQCQLVYY 171
            +PMR+ MTL+IKP ++ EY  HH +S PEV  ALRSVG+RNLSLW +GNR+FYYAEYVG  PFDEAM  Y+KM  V +WE LMH YQEKIP ++GD        VWW+ C  VY+
Sbjct:    9 KPMRMGMTLDIKPGMLAEYKAHHDNSWPEVESALRSVGMRNLSLWAYGNRMFYYAEYVGDTPFDEAMATYAKMPRVSEWEALMHKYQEKIPAADGDTADTAAADVWWRPCTQVYH 123          
BLAST of Ggra9136.t1 vs. uniprot
Match: uncharacterized protein LOC123543460 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE674 (uncharacterized protein LOC123543460 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE674)

HSP 1 Score: 131 bits (329), Expect = 1.940e-36
Identity = 66/111 (59.46%), Postives = 79/111 (71.17%), Query Frame = 0
Query:   71 MTLNIKPDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEY--VGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSE------GDVWWQQCQLVYYQA 173
            MTL+IKP++V EYI  HA  R  V +ALRSVG+RNLSLW    RLFYYAE+  +G E FDEAM +Y+ M GVK+WE+ MH YQ KIPG++       DVWWQ C  VYYQA
Sbjct:    1 MTLDIKPELVNEYIAKHATPRQNVVDALRSVGLRNLSLWVSRERLFYYAEFAPIGRESFDEAMVRYAAMPGVKEWEEEMHQYQAKIPGTDVENGASKDVWWQVCAPVYYQA 111          
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A7S0RQQ5 (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RQQ5_9CHLO)

HSP 1 Score: 100 bits (248), Expect = 9.000e-24
Identity = 54/136 (39.71%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   41 QVLACGARAGQPVSKMSSEQTKAQEPM-RIAMTLNIKPDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGN--RLFYYAEYVGT--EPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSEGDVWWQQCQLVYY 171
            QV         P   M+S  T A++ + RIAMTLNI+P+ V++Y   H ++ PE+ +ALR VG+ NLS++   +  +LF Y EY     E F EAM +Y+ M  V++WE+LM   Q ++PG+    WWQ+C+ +Y+
Sbjct:    9 QVELTNISVSTPKVLMASSATTAKKRVQRIAMTLNIRPEKVEQYKTEHDNAWPEIAKALREVGVTNLSIFLAPDMPKLFMYMEYTRADEESFQEAMARYAVMPRVQEWEELMRTMQVQLPGAPPGKWWQECRELYW 144          
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A5N8YYL3 (L-rhamnose mutarotase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A5N8YYL3_9CHLR)

HSP 1 Score: 73.2 bits (178), Expect = 1.120e-13
Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 0
Query:   69 IAMTLNIK--PDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMD--KYSKMEGVKDWEDLMHNYQEKIPGSEGDVWWQQCQLVY 170
            IA  L++K  P+++ +Y ++H +  PEV EALR +GI  + ++  GN LF Y      + FD   D   Y+  +  ++W DLM  YQ+K+P +E + WW    L +
Sbjct:    5 IAQVLDLKNDPELIAKYEEYHRNVWPEVLEALRGIGIERMEIFRSGNHLFMYCTV--PDDFDPRKDFQGYTASKRAEEWNDLMMEYQQKVPEAEENDWWYPMSLAF 108          
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A2E9UND6 (Uncharacterized protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9UND6_9CHLR)

HSP 1 Score: 72.0 bits (175), Expect = 9.390e-13
Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 0
Query:   69 IAMTLNIK--PDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMD--KYSKMEGVKDWEDLMHNYQEKIPGSEGDVWWQQCQLVY 170
            IA  L++K  P+++ +Y ++H +  PEV EAL+ +GI  + ++  GN LF Y      + FD   D   Y+  +  ++W DLM  YQ+K+P +E + WW    L +
Sbjct:   52 IAQVLDLKNDPELIAKYEEYHRNVWPEVLEALKGIGIERMEIFRSGNHLFMYCTV--PDDFDPRKDFQGYTASKRAEEWNDLMMEYQQKVPEAEENDWWYPMSLAF 155          
BLAST of Ggra9136.t1 vs. uniprot
Match: A0A1Q5PCW0 (L-fucose mutarotase n=2 Tax=Pontibacter flavimaris TaxID=1797110 RepID=A0A1Q5PCW0_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 3.020e-12
Identity = 32/105 (30.48%), Postives = 58/105 (55.24%), Query Frame = 0
Query:   68 RIAMTLNIK--PDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSEGDVWWQQCQLVY 170
            R  +TL++K  P ++ EY  +H H  PE++ +++  GIR++ ++ W NRLF   E      F++     +    V++WE+LM  YQ+ +PG      WQ  + ++
Sbjct:    3 RYGLTLDLKDDPTLIAEYEAYHRHVWPEIQASIKESGIRHMEIYRWSNRLFMLMETEDDFSFEKKAALDAANAKVQEWEELMWQYQQALPGVAAGEKWQLMERIF 107          
BLAST of Ggra9136.t1 vs. uniprot
Match: L-rhamnose mutarotase n=1 Tax=Pedobacter sp. Q8-18 TaxID=2895286 RepID=UPI001EE3FEFB (L-rhamnose mutarotase n=1 Tax=Pedobacter sp. Q8-18 TaxID=2895286 RepID=UPI001EE3FEFB)

HSP 1 Score: 68.9 bits (167), Expect = 4.250e-12
Identity = 35/98 (35.71%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   68 RIAMTLNIKPD--VVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSE-GDVW 162
            R  +TL++ PD  +++EY  +HA   PEV++++ + GI ++ ++   NRLF   E      FD+  +   K E V+ WE LM NYQ+ +PG++ G+ W
Sbjct:    3 RYCLTLDLIPDEKLIKEYKQYHAEIWPEVKQSILNAGIIDMEIYLLSNRLFMIMEVNDEFSFDKKSEADLKNEKVQQWETLMWNYQQALPGAKIGEKW 100          
BLAST of Ggra9136.t1 vs. uniprot
Match: L-rhamnose mutarotase n=1 Tax=Flavobacterium agrisoli TaxID=2793066 RepID=UPI001904E1E9 (L-rhamnose mutarotase n=1 Tax=Flavobacterium agrisoli TaxID=2793066 RepID=UPI001904E1E9)

HSP 1 Score: 68.6 bits (166), Expect = 5.970e-12
Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   69 IAMTLNIKPDVVQEYIDHHAHSRPEVREALRSVGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNYQEKIPGSE-GDVW 162
            +A+ L+  P ++ EYI HH +  PE+R+++ + GI+NL ++N GNRL    E      F+E     ++   V++WE LM  +Q+ +P ++ G+ W
Sbjct:    6 LALDLHDDPTLIAEYITHHQNVWPEIRKSIEAAGIKNLEIYNIGNRLIMIIEAEAHFTFEEKAKLDAENPKVQEWEALMWKFQKALPQAKSGEKW 100          
The following BLAST results are available for this feature:
BLAST of Ggra9136.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHS61.050e-6174.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T6LEZ21.440e-4361.11Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NJJ51.270e-4260.00Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
uncharacterized protein LOC123543460 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE6741.940e-3659.46uncharacterized protein LOC123543460 n=1 Tax=Merce... [more]
A0A7S0RQQ59.000e-2439.71Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A5N8YYL31.120e-1334.91L-rhamnose mutarotase n=3 Tax=Chloroflexi TaxID=20... [more]
A0A2E9UND69.390e-1333.96Uncharacterized protein n=1 Tax=Dehalococcoidia ba... [more]
A0A1Q5PCW03.020e-1230.48L-fucose mutarotase n=2 Tax=Pontibacter flavimaris... [more]
L-rhamnose mutarotase n=1 Tax=Pedobacter sp. Q8-18 TaxID=2895286 RepID=UPI001EE3FEFB4.250e-1235.71L-rhamnose mutarotase n=1 Tax=Pedobacter sp. Q8-18... [more]
L-rhamnose mutarotase n=1 Tax=Flavobacterium agrisoli TaxID=2793066 RepID=UPI001904E1E95.970e-1233.68L-rhamnose mutarotase n=1 Tax=Flavobacterium agris... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008000Rhamnose/fucose mutarotasePFAMPF05336rhaMcoord: 68..171
e-value: 2.5E-21
score: 75.8
NoneNo IPR availableGENE3D3.30.70.100coord: 63..160
e-value: 8.3E-22
score: 78.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR43239UPF0734 PROTEIN DDB_G0273871/DDB_G0273177coord: 68..171
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 67..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:79429..79950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9136.t1Ggra9136.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 79429..79950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9136.t1 ID=Ggra9136.t1|Name=Ggra9136.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=174bp
MRRTLVAGNAGHVDRKRHRGDAKEEERRYTNRRSFHAFDAQVLACGARAG
QPVSKMSSEQTKAQEPMRIAMTLNIKPDVVQEYIDHHAHSRPEVREALRS
VGIRNLSLWNWGNRLFYYAEYVGTEPFDEAMDKYSKMEGVKDWEDLMHNY
QEKIPGSEGDVWWQQCQLVYYQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008000Rham/fucose_mutarotase
IPR011008Dimeric_a/b-barrel