Ggra9085.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9085.t1
Unique NameGgra9085.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length225
Homology
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IRX9 (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX9_9FLOR)

HSP 1 Score: 323 bits (827), Expect = 1.640e-109
Identity = 168/235 (71.49%), Postives = 188/235 (80.00%), Query Frame = 0
Query:    1 MIRQVTVLFFALV-VAQASAS--------RSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESL--VGKGVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            MIRQ+T L FALV +  ASAS        R  R C GQA+Y+VNFTN LTP RFG  IP+ GLV+SPLAGASHSNR+SLLTVRS ASPQVEQIAETGQNGRFV LAE L    +GVK  + A GPTMPGN T L+FTVDC+HPFITVVGMIAPSPDWLVQ+ N+NLVRRG F+  R    IAYDAGTDDGA+FT+PTDASLDMP+EPQKNIAPLVED+TD F+GRFIG Y I +V
Sbjct:    1 MIRQLTSLLFALVLIGTASASQRTGMRQTRRMRTCSGQAEYVVNFTNFLTPRRFGRRIPKTGLVYSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAEHLRDTEQGVKTVAGADGPTMPGNSTTLRFTVDCEHPFITVVGMIAPSPDWLVQVGNVNLVRRGRFISFRXXXXIAYDAGTDDGAEFTSPTDASLDMPSEPQKNIAPLVEDDTDPFNGRFIGVYTIRRV 235          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IUA8 (Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA8_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 1.240e-99
Identity = 150/226 (66.37%), Postives = 179/226 (79.20%), Query Frame = 0
Query:    1 MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESL--VGKGVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            MI QVT    +L + QA A+  +R C G+A Y V F NLLTPA FG  IP+ GLVFSPLAGASHSNRIS LT+R  ASPQVEQIAETGQNGRFV LA++L    +GV++ ++A GPTMPG  T L +TVDC HPFIT++GMIAPSPDW+VQI+N N+VR G F+ R SG +IAYDAGTDDG +FT+P DASLDMPTEPQKNIAPLVEDETD F GR +G+++I K+
Sbjct:    1 MIHQVTAFLLSLALFQAVAA--ERRCRGKAIYKVTFRNLLTPANFGKLIPDNGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVALAKNLRRQRRGVRSVASAKGPTMPGKSTTLFYTVDCAHPFITMLGMIAPSPDWIVQINNRNMVRDGKFITRDSGTMIAYDAGTDDGREFTSPVDASLDMPTEPQKNIAPLVEDETDRFQGRIVGRFLIQKI 224          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IT76 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT76_9FLOR)

HSP 1 Score: 295 bits (754), Expect = 1.440e-98
Identity = 149/226 (65.93%), Postives = 177/226 (78.32%), Query Frame = 0
Query:    1 MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESL--VGKGVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            MIRQVTV   +L + QA ++     C G+A Y V+F NLLTP  FG+ IPE GLVFSPLAGASHSNRIS LT+R  ASPQVEQIAETGQNGRFVTLA +L   G+GV + +AA GPTMPGN+T L + VDC HPFIT++GMIAPSPDW+VQI+N N++R G F+ R SG LIAYD GTD G +FT+P DASLDMPTEPQ NIAPLVEDETD F GR +G++ I ++
Sbjct:    1 MIRQVTVFLLSLALLQAVSADGH--CSGKAIYRVSFQNLLTPKNFGNLIPENGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVTLARNLRRQGRGVLHVAAAKGPTMPGNFTNLFYAVDCAHPFITMLGMIAPSPDWIVQINNRNMIRDGKFITRESGTLIAYDVGTDSGREFTSPVDASLDMPTEPQMNIAPLVEDETDRFQGRVVGRFHIQRI 224          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IRW7 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW7_9FLOR)

HSP 1 Score: 280 bits (717), Expect = 5.680e-93
Identity = 143/225 (63.56%), Postives = 170/225 (75.56%), Query Frame = 0
Query:    1 MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESLVGKG-VKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            MIR+V  +F  L + +A+       C GQA Y V+FTNLLTP  FG+ IP  GLVFSPLAGASHSNR S  T+R  ASPQVEQIAETGQNGRFV  A +LV  G V++ ++A GPTMPG  T+L FTVDC  PFIT++GM+APSPDW+VQI+N N+ R G F+   +G LIAYD GTDDG +FT+P DASLD+PTEPQKNIAPLVEDETD F+GR IG + I KV
Sbjct:    1 MIRKVLAVFLTLALFEAAVGSG---CSGQAVYQVSFTNLLTPENFGELIPSTGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVAQATNLVPTGKVRSVASADGPTMPGTTTSLLFTVDCARPFITMLGMVAPSPDWIVQINNRNMFRDGMFISSENGTLIAYDTGTDDGREFTSPVDASLDIPTEPQKNIAPLVEDETDRFEGRIIGTFDIRKV 222          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IS06 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS06_9FLOR)

HSP 1 Score: 278 bits (712), Expect = 3.500e-92
Identity = 144/226 (63.72%), Postives = 168/226 (74.34%), Query Frame = 0
Query:    1 MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESLV--GKGVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            MIR++     AL V +   +     C G+A Y V F NLLTP  FGD IPE GLVFSPLAGASHSNRIS  T+R  ASPQVEQIAETGQNGRFV LA +L    +GV + SAA GPTMPGN T L F VDC HPFIT++GMIAPSPDW+VQ++N  L+R G F+   +G LIAYD GTDDG +FT+P DASLDMPTEPQ+NIAPLVEDETD F+GR +G + I +V
Sbjct:    1 MIRKLIAFVLALAVFEVVLAEGH--CTGRALYRVTFRNLLTPENFGDLIPETGLVFSPLAGASHSNRISFFTIRGFASPQVEQIAETGQNGRFVRLARNLKYSRRGVLSVSAANGPTMPGNTTTLYFFVDCAHPFITMLGMIAPSPDWIVQLNNRPLIRDGEFISGENGTLIAYDTGTDDGREFTSPVDASLDMPTEPQQNIAPLVEDETDRFEGRIVGMFYIQRV 224          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IRX0 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX0_9FLOR)

HSP 1 Score: 274 bits (701), Expect = 1.540e-90
Identity = 141/225 (62.67%), Postives = 167/225 (74.22%), Query Frame = 0
Query:    1 MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESLVGKG-VKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            MIRQVT  F +L + QA A  +   C G+A Y V FTNLLT   FGD IP  GLVFSPLAGASHSNR S  T+R  ASPQVEQIAETGQNGRFVT A+++   G V   +AA GP++PG  T+L F VDC  PFIT++GMIAPSPDW+VQI+N N+ R G F+ R +G LIAYD GTDDG +FT P DASLDMPTEPQ NI PLVEDETD F+GR +G++ I ++
Sbjct:    1 MIRQVTAFFLSLALFQAVAESA---CSGRAVYRVTFTNLLTAENFGDLIPPNGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVTQAKNMQRTGKVFTVAAADGPSLPGTDTSLFFAVDCARPFITMLGMIAPSPDWIVQINNRNMFRNGMFIPRENGTLIAYDTGTDDGREFTPPGDASLDMPTEPQMNIVPLVEDETDRFEGRIVGRFNIMRI 222          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IT49 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT49_9FLOR)

HSP 1 Score: 269 bits (687), Expect = 2.210e-88
Identity = 137/226 (60.62%), Postives = 167/226 (73.89%), Query Frame = 0
Query:    1 MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESLVGK--GVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            M+RQVT  F  L +        +  C G+A Y V+F NLLTP  FG  IP+ GLVFSPL GASHS+RIS LTVR  AS QVEQIAETG N RFVT+A +L  +  GV + +AA GPT+PG YT L + VDC HPFIT++GMIAPSPDW+VQI+N N++R G F+ R  G LIAYDAGTDDG +FT P DAS+D P+EPQKNIAPLVEDETD F GR +G+++I ++
Sbjct:    1 MMRQVTAFFLVLTLVHVVPVEGR--CSGRAVYRVSFHNLLTPENFGKLIPQRGLVFSPLVGASHSHRISFLTVRGFASRQVEQIAETGDNSRFVTMARNLRSQRHGVLHVAAANGPTLPGKYTTLFYPVDCAHPFITMLGMIAPSPDWIVQINNRNMLRDGKFVARDFGTLIAYDAGTDDGREFTIPADASVDKPSEPQKNIAPLVEDETDRFQGRIVGRFLIQRI 224          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IF45 (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF45_9FLOR)

HSP 1 Score: 251 bits (642), Expect = 1.460e-81
Identity = 128/222 (57.66%), Postives = 159/222 (71.62%), Query Frame = 0
Query:    6 TVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESLVG--KGVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNIN-LVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            +++ F ++   A   +S+ MC G+A Y V F N+LTP  FG  IPE GL FSPLA  SHSNR S LTVR  ASPQVEQIAETG NGRF+ LAE+L G  +GV++ +  MG   PG    ++ TV+C++PFIT + MIAPSPDW+VQ++N+N L   G F QR  G LIAYDAGTDDG DFT  +DAS DMP+EPQKNIAPL EDETD FDGR +G Y+  ++
Sbjct:    3 SIILFPILAIYALIGQSQAMCSGEAVYQVIFNNMLTPQTFGSKIPETGLNFSPLAAVSHSNRQSFLTVRGFASPQVEQIAETGMNGRFLALAENLKGAEQGVRDVAGGMGAG-PGMNQTVELTVNCENPFITALSMIAPSPDWIVQVNNMNTLDMNGEFRQRLGGNLIAYDAGTDDGGDFTAASDASFDMPSEPQKNIAPLFEDETDPFDGRMVGTYVFVRI 223          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V3IFK3 (Spondin domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK3_9FLOR)

HSP 1 Score: 155 bits (392), Expect = 6.030e-45
Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 0
Query:  104 GVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVEDETDAFDGRFIGKYIITKV 224
            GV + +AA GPT+PG YT L + VDC HPFI ++GMIAPSP+W+VQ +N N++R   F+    G LIA DAGTDDG +FT P DAS D P+EPQKNIAPLVEDE D F+ R +GK++I ++
Sbjct:   11 GVLHVAAANGPTLPGKYTTLSYPVDCSHPFIMMLGMIAPSPNWIVQTNNRNMLRDVKFVAGDFGTLIASDAGTDDGQEFTIPADASFDKPSEPQKNIAPLVEDEADRFERRIVGKFLIQRI 131          
BLAST of Ggra9085.t1 vs. uniprot
Match: A0A2V4A6I3 (Spondin domain-containing protein n=1 Tax=Marinifilum breve TaxID=2184082 RepID=A0A2V4A6I3_9BACT)

HSP 1 Score: 107 bits (266), Expect = 7.210e-25
Identity = 65/207 (31.40%), Postives = 105/207 (50.72%), Query Frame = 0
Query:    6 TVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIPEGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESLVGKG-----VKNASAAMGPTMPGNYTALKFTVDC--DHPFITVVGMIAPSPDWLVQISNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNIAPLVE 205
            ++  F +  + + ++   +     A Y V  T         ++ PE    FSP+AG  H+N +SL T  + ASP ++++AETG         E+ +  G     +K+A       +P   + ++F +D   DH  +++V MIAPSPDW V +SN+NL   G FL   +     YDAGTD G +FT     S ++P++P +NI  + E
Sbjct:   13 SIFLFGISCSDSDSTEEPQPMETSAKYSVTVTGNWNETNHPNNFPENDH-FSPVAGMVHNNEVSLFTTGNLASPGIKKMAETGGTNPLDDEIEAFINGGDALSFIKDAG------LPTGTSEIEFEIDLTKDHSLVSLVSMIAPSPDWFVAVSNVNLYENGLFLDEITVEAGTYDAGTDSGENFT-----SANLPSDPVENIFAIKE 207          
The following BLAST results are available for this feature:
BLAST of Ggra9085.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX91.640e-10971.49Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IUA81.240e-9966.37Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT761.440e-9865.93Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRW75.680e-9363.56Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IS063.500e-9263.72Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX01.540e-9062.67Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT492.210e-8860.62Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IF451.460e-8157.66Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IFK36.030e-4558.68Spondin domain-containing protein n=2 Tax=Gracilar... [more]
A0A2V4A6I37.210e-2531.40Spondin domain-containing protein n=1 Tax=Marinifi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 13..214
e-value: 8.1E-39
score: 135.4
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 30..206
e-value: 5.8E-27
score: 95.0
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 20..207
score: 24.701963
NoneNo IPR availablePANTHERPTHR11311SPONDINcoord: 56..203
NoneNo IPR availablePANTHERPTHR11311:SF16SPONDIN-1coord: 56..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:154496..155170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9085.t1Ggra9085.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 154496..155170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9085.t1 ID=Ggra9085.t1|Name=Ggra9085.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=225bp
MIRQVTVLFFALVVAQASASRSKRMCMGQADYIVNFTNLLTPARFGDSIP
EGGLVFSPLAGASHSNRISLLTVRSQASPQVEQIAETGQNGRFVTLAESL
VGKGVKNASAAMGPTMPGNYTALKFTVDCDHPFITVVGMIAPSPDWLVQI
SNINLVRRGYFLQRRSGRLIAYDAGTDDGADFTNPTDASLDMPTEPQKNI
APLVEDETDAFDGRFIGKYIITKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038678Spondin_N_sf
IPR009465Spondin_N