Ggra9084.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9084.t1
Unique NameGgra9084.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length398
Homology
BLAST of Ggra9084.t1 vs. uniprot
Match: A0A2V3IT25 (THUMP domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT25_9FLOR)

HSP 1 Score: 343 bits (881), Expect = 5.680e-112
Identity = 185/313 (59.11%), Postives = 226/313 (72.20%), Query Frame = 0
Query:    1 MGSSVPQKRAAPENVPLSSRARRRKFRNAAVHTVRRADLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVS------ADQGPQSAQATDDQGTVR-----------------AVKPDNAAAGQGEKHEKNA-LENELAQLRKREGHAFTRVVADVKGAVFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREAACPSKPKDDK 289
            M +++PQKRA+P N  L +RARR+KFR ++  TVRR+DL+ AQ GVLVSCTPGHE HAFRDAV+LFS +V       A+  P S+Q+T     V                  A KPD +       +  NA LE ELA+LR      FTRV+ADVKG VFLRVND+SVD+EH+VE AL+EARESG+ GSRHC+R+IPV  TCYA+AE A   A+KVVK+RFP +     VS+AIV+R+RLNNS KRD+FI+ IA AI++YEPRY VNLTKPDVVLIVEVLK SCCIG F K+YQLAKLNLRE ACPSKPK+++
Sbjct:    1 MTTTLPQKRASPLNAHLPARARRKKFRASSYATVRRSDLTGAQSGVLVSCTPGHEQHAFRDAVLLFSPYVKQSSHKPAEPCPTSSQSTAPSSAVLVMTELAEQKDVKTSSAPAEKPDESKQAPASSNTNNATLEEELAELRDASSKVFTRVIADVKGTVFLRVNDKSVDLEHIVESALIEARESGSAGSRHCVRVIPVFGTCYARAEVAAATAVKVVKQRFPHISPGVDVSYAIVYRSRLNNSVKRDDFIKLIADAIYKYEPRYKVNLTKPDVVLIVEVLKGSCCIGVFRKYYQLAKLNLREVACPSKPKEER 313          
BLAST of Ggra9084.t1 vs. uniprot
Match: R7Q191 (THUMP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q191_CHOCR)

HSP 1 Score: 247 bits (630), Expect = 3.200e-74
Identity = 147/332 (44.28%), Postives = 192/332 (57.83%), Query Frame = 0
Query:    1 MGSSVPQKRAAPENVPLSSRARRRKFRNAAVHTVRRADLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKN------------------------------------------ALENELAQLRKREGHAFTRVVADVKGAVFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGG-VSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREAACPSKPKDDK 289
            MG  V +KR    N    +R  R KFR     T  R DL    +G+L+SCTP HE+HAFR+AV++  ++   + G   A   DD   + A    +    Q E  EK                                           AL+ EL ++R  +   FTR+   V G +F+++N   VD+E+VVE AL +AR SG+  SRHCIR++P+H+TCYAK E A   A+++VK+ FPP+   G  VS+AI FR+RLN SA R+EFI+ IA AI E EPRY VNLT PDV LIVEV+KTSCCIGTF  +YQLAK+NLREAACPSKPK++K
Sbjct:    1 MGGDVGKKRRRNGN---RNRHDRNKFRRTINSTQHRKDLGYGLQGILISCTPRHENHAFREAVIMLGKYCE-NSGEGKA---DD---ISAAAHHSGGENQKEAPEKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSKALQAELKEIRDPKQRLFTRIDGGVNGCIFIQINRPHVDLENVVECALKDARASGSPNSRHCIRIMPIHSTCYAKPEDAAKAAVEIVKKHFPPMVAEGKPVSYAISFRSRLNTSAHREEFIKVIAKAIEECEPRYKVNLTSPDVTLIVEVMKTSCCIGTFRHYYQLAKMNLREAACPSKPKEEK 322          
BLAST of Ggra9084.t1 vs. uniprot
Match: C3YWY1 (THUMP domain-containing protein (Fragment) n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YWY1_BRAFL)

HSP 1 Score: 99.0 bits (245), Expect = 3.670e-20
Identity = 70/245 (28.57%), Postives = 119/245 (48.57%), Query Frame = 0
Query:   36 RADLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKNALENELAQLRKREGHAFTRVVADVKGA---VFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPV-QQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNL 276
            R  L    +G+L++C   +E    R+A  L + +     GP+             + P ++ +   E+  + AL  E+AQ++++ G    R  A   GA   VF++   +S D   +V   L +   S    +R+ +R+IPV + C A  E+      K  +E FP         S+AIVF+ R + + KRDE I+A+A  + E  P   VNL  PD+ +++EV++T CC+     ++ L K N+
Sbjct:   19 RMSLEVGMKGILITCNK-NEKACVREAYNLLNEYADQMYGPE-------------ITPSDSGSESEEEDVEAALAKEVAQMKEKSGKDKRRFQAMDSGANNVVFIQSQLESPD--KLVHHILDDINASKKFKTRNVLRMIPVMSACKAYLENVK----KSAEEMFPKFFSGEDNPSYAIVFKTRNSGTMKRDEVIKALAGVVSEVNPACKVNLNSPDLAIVIEVIRTVCCMSVLKDYFLLKKYNI 243          
BLAST of Ggra9084.t1 vs. uniprot
Match: A0A8C4Z2I2 (THUMP domain containing 1 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4Z2I2_GADMO)

HSP 1 Score: 99.0 bits (245), Expect = 1.060e-19
Identity = 73/258 (28.29%), Postives = 125/258 (48.45%), Query Frame = 0
Query:   38 DLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKNALENELAQLRKREGHAFTRVVADVKGA---VFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREAACPSKPKDDKGEK 292
            +L    +G++++C   +E     +A  L + +     GP+  +  D      + + D+A A         AL+ E+AQL+K+ G    R  A   GA   VF+R ++  V+ + +V   L +   +    SR+ +R++PV  TC A  E      +  ++  F P       +F I F+AR ++  KRD+ I+A+A  + +  P   V+LT P++ +IVEV+KT CC+     +    K NL+E      PK D  +K
Sbjct:   28 ELEVGMQGIIITCNM-NEKKCTSEAYSLLNEYADKLYGPEKIEDCDGS---NSEEEDDAEA---------ALKKEVAQLKKK-GKGEKRFQALDSGANNVVFIRTHN--VEPDKLVHHVLSDLHATKKNKSRNILRMLPVSGTCKAFQEDMDKYLITFLEPWFKPPNH---ATFQIAFKARNSSHNKRDDIIKAVAGLVGKMNPENKVDLTNPELTIIVEVIKTVCCLSVVPDYALYRKYNLQEVVKEDAPKADAADK 266          
BLAST of Ggra9084.t1 vs. uniprot
Match: A0A6P5A7T7 (THUMP domain-containing protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A7T7_BRABE)

HSP 1 Score: 99.4 bits (246), Expect = 1.170e-19
Identity = 79/270 (29.26%), Postives = 128/270 (47.41%), Query Frame = 0
Query:   35 RRADLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKNALENELAQLRKREGHAFTRVVADVKGA---VFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPV-QQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREAACPSK--PKDDKGEKQSAAVG 298
            RR  L    +GVLV+C   +E    R+A  L + +     GP+             +   ++ +   E+  + AL  E+AQ++ + G    R  A   GA   VF++   +S D   +V   L +   S    +R+ +R+IPV + C A  E+      K  +E FP         S+AIVF+ R + + KRDE I A+A  + E  P   VNL  PD+ +++EV++T CC+     ++QL K N+      +K  PK  + + Q  +VG
Sbjct:   18 RRMCLEIGMKGVLVTCNK-NEKACIREAYNLLNEYADEMYGPE-------------ITASDSGSESEEEDVEAALAKEVAQMKNKAGKEKRRFQAMDSGANNVVFIQSQLESPD--ELVHHILDDINTSKKFKTRNVLRIIPVMSACKAYLENVK----KSAEEMFPKFFSGEDNPSYAIVFKTRNSGTMKRDEVIPALAGVVSEVNPACKVNLNSPDLAIVIEVIRTVCCMSVLKDYFQLKKYNIHSIVEGTKDDPKPREVKDQGPSVG 267          
BLAST of Ggra9084.t1 vs. uniprot
Match: A0A7S0LPV6 (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LPV6_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 1.640e-19
Identity = 67/251 (26.69%), Postives = 119/251 (47.41%), Query Frame = 0
Query:   37 ADLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKNALENELAQLRKREGHA--------FTRVVADVKGAVFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREA 279
            ++L++  RG L++     E  A R+ + LF      D       +   +      K  + A         +AL  ELA LR+    A        F+     + G++ +  N  ++D   ++++ +V+A  +  + + H +RL+PV ATC A A S    ALK +       ++    ++A+ +R R N    + E I A+A+A+ E  PR  V+L +P+V ++V+V+KT CC+     + +L   NLR A
Sbjct:    9 SELARGVRGALITFDTHQEKKAIRECLALFDALCDEDAEKTEVSSGGARSAAAGPKEGDTAG--------DALARELADLRQPANGAKRTKGTKRFSVTTTGLAGSILISFNHAAIDPLALIDRVMVQAIATKTSHAPHLVRLLPVQATCSANAASIVQ-ALKPLMLTLQSSER----TYAVQWRRRCNTGIDKAEVIDAVATAVSEIAPRARVDLRQPEVAVMVDVMKTVCCVSVLPSWQRLRAYNLRVA 246          
BLAST of Ggra9084.t1 vs. uniprot
Match: THUMP domain-containing protein 1 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8AE1C5 (THUMP domain-containing protein 1 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8AE1C5)

HSP 1 Score: 97.8 bits (242), Expect = 2.680e-19
Identity = 77/267 (28.84%), Postives = 126/267 (47.19%), Query Frame = 0
Query:   19 SRARRRKFRNAAVHTVRRA--DLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKNALENELAQLR---KREGHAFTRVVADVKGAVFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREAA 280
            +R R RK      H  +R   +L    +GVLV+C   +E     +A  L S +  A  GP+    T D  +    + D  AA          L+ E++Q++   K     F  V +     +F+R +   VD E +V   L +  ++    SR  +R++PV  TC A +E      L V  ER+    Q    +F I F+AR ++  KR+E I A+A  + +  P   V+LT P++ +I+E+++T CC+     + +  K NL+E A
Sbjct:    4 TRKRSRKRFGGYAHKKQRGARELEVGAQGVLVTCNM-NERKCTSEAFSLLSEYADALYGPEQPADTQDSLSEEEEEEDAEAA----------LKKEVSQIKASIKTHQQRFCAVESGANNVLFIRTH--GVDPERLVHHILSDLYQTKKRKSRTILRMLPVSGTCKAFSEDMEKF-LSVFLERWFRAPQRA--TFQICFKARNSSHNKREEVINAVAGLVGKLNPLNKVDLTNPELSIIIEIIRTVCCVSVLKDYTRFRKYNLQEVA 254          
BLAST of Ggra9084.t1 vs. uniprot
Match: THUMP domain-containing protein 1 homolog isoform X1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D03AD (THUMP domain-containing protein 1 homolog isoform X1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D03AD)

HSP 1 Score: 98.6 bits (244), Expect = 3.530e-19
Identity = 69/225 (30.67%), Postives = 114/225 (50.67%), Query Frame = 0
Query:   71 SADQGPQSAQATDDQGTVRAVKPD--------------NAAAGQGEKHEKNAL-ENELAQLRKREGHAFTRVVADVKGAVF--LRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLRE 278
            S  +  ++ + TDDQ  V AV+P               N  + + EK   + L E+ELA+L  R    F+ + +   G VF  +R  D     + +V+  +     +    SR  +R++P+  TCYA  E     A+K V E+F PV+    + FA+++ AR N    R + I A+A ++      + V+L+ PDV ++V+++KT C IG   K+ +LAK N+RE
Sbjct:  155 SEKEAQENKEKTDDQ-EVEAVEPSAKKQCTENDAFKCRNDISNKIEKKSVDRLIEDELAELGDRSKRRFSNLDSGCNGVVFVQMRKRDGDPSPKDIVQHMMTSLASTRKHVSRFLLRVLPIEITCYASDEEIRR-AIKPVIEQFFPVETQNPLKFAVLYDARANTGVDRTKIIDAVAKSVPS---AHKVDLSNPDVSIVVQIVKTMCLIGIVEKYKELAKYNIRE 374          
BLAST of Ggra9084.t1 vs. uniprot
Match: THUMP domain-containing protein 1 isoform X1 n=5 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018861922 (THUMP domain-containing protein 1 isoform X1 n=5 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018861922)

HSP 1 Score: 98.6 bits (244), Expect = 5.130e-19
Identity = 75/271 (27.68%), Postives = 132/271 (48.71%), Query Frame = 0
Query:   38 DLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATD---DQGTVRAVKPDNAAAGQGEKHE---KNALENELAQLRKREGHAFTRVVADVKGA---VFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLREAACPSKPKDDKGEKQSAAVGQ 299
            +L    +G+L++C+      A  +A  L S +     GP+    T      G     +    + G+  K E   ++AL+ E+AQLR   G    R  A   GA   +F+R   ++++ + +V   L +   +    +R  +R++PV  TC A  E         ++  F   ++    ++ I F+AR N+  KRD+ I+AIA  + +  P+  VNLT+PD+ +I+EV+K+ CC+    ++ +  K NL+E     +PK +   K +A  GQ
Sbjct:   31 ELEVGMQGILITCSMNQRKCA-AEAFNLLSEYADKLYGPEKLTLTTCDFSAGGQFEEEAGECSEGENAKEEVDVEDALKKEVAQLRAGGGRQERRFQALDSGANNVIFIRT--RNLESDKLVHHILSDLHATKKKKTRVILRMLPVTGTCKAFPEDMMRYMSTFLEPWF---KKPNHATYQIAFKARNNSHNKRDDVIKAIAGLVGKLNPKNKVNLTQPDLTIILEVIKSVCCVSVVREYTRYRKYNLQEVVKDEEPKKEDAAKDAAKDGQ 295          
BLAST of Ggra9084.t1 vs. uniprot
Match: A0A7S0ZGN6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGN6_9RHOD)

HSP 1 Score: 97.1 bits (240), Expect = 6.450e-19
Identity = 73/252 (28.97%), Postives = 117/252 (46.43%), Query Frame = 0
Query:   31 VHTVRRADLSQAQRGVLVSCTPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQGEKHEKNALENELAQLRKREGHAFTRVVAD-----VKGAVFLRVNDQSVDVEHVVEQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPVQQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVVLIVEVLKTSCCIGTFTKFYQLAKLNLR 277
            V T+ +  +     GVLV+C P  E  A ++   LF  F+  +  PQ +   +       +K  + A           L +EL  LR    H     V       VKG  F+R    ++D   +V +  + A    +T +R  IRLIP+HATCYAK   A   + KV+ E            + I++++R N   +R+EF+QA+   +  +   ++VNL   D+ + VE+   +C IG    +Y+ +KLNLR
Sbjct:   69 VWTLLKNRIEDGSHGVLVTCAPHQEARAAKEFFKLFEPFL-IESLPQISTTQNSP----LLKSKSIA---------QELASELEDLRDESEHIVNGSVVKMYETGVKGMFFVRFLSDALDSVSLVHKVFLNAEREHSTFARCIIRLIPIHATCYAKVSDAVD-SCKVLFETTLGEDHRKSSEYCIMYKSRNNTGTRREEFLQALQPLVPLH---HSVNLKSADIAICVEICCKTCFIGVVHSYYRFSKLNLR 302          
The following BLAST results are available for this feature:
BLAST of Ggra9084.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT255.680e-11259.11THUMP domain-containing protein 1 n=1 Tax=Gracilar... [more]
R7Q1913.200e-7444.28THUMP domain-containing protein n=1 Tax=Chondrus c... [more]
C3YWY13.670e-2028.57THUMP domain-containing protein (Fragment) n=2 Tax... [more]
A0A8C4Z2I21.060e-1928.29THUMP domain containing 1 n=1 Tax=Gadus morhua Tax... [more]
A0A6P5A7T71.170e-1929.26THUMP domain-containing protein 1-like n=1 Tax=Bra... [more]
A0A7S0LPV61.640e-1926.69Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
THUMP domain-containing protein 1 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8AE1C52.680e-1928.84THUMP domain-containing protein 1 n=1 Tax=Puntigru... [more]
THUMP domain-containing protein 1 homolog isoform X1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D03AD3.530e-1930.67THUMP domain-containing protein 1 homolog isoform ... [more]
THUMP domain-containing protein 1 isoform X1 n=5 Tax=Syngnathus acus TaxID=161584 RepID=UPI00188619225.130e-1927.68THUMP domain-containing protein 1 isoform X1 n=5 T... [more]
A0A7S0ZGN66.450e-1928.97Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availableGENE3D3.30.2300.10THUMP superfamilycoord: 179..266
e-value: 1.1E-19
score: 72.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY143437THUMP domain-likecoord: 182..263
IPR004114THUMP domainSMARTSM00981THUMP_a_2coord: 170..266
e-value: 1.7E-7
score: 40.9
IPR004114THUMP domainPFAMPF02926THUMPcoord: 144..264
e-value: 6.9E-14
score: 52.2
IPR004114THUMP domainPROSITEPS51165THUMPcoord: 148..266
score: 15.67323
IPR040183THUMP domain-containing protein 1-likePANTHERPTHR13452THUMP DOMAIN CONTAINING PROTEIN 1-RELATEDcoord: 10..297
IPR040183THUMP domain-containing protein 1-likeCDDcd11717THUMP_THUMPD1_likecoord: 104..263
e-value: 2.97971E-32
score: 117.299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:152268..153461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9084.t1Ggra9084.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 152268..153461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9084.t1 ID=Ggra9084.t1|Name=Ggra9084.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=398bp
MGSSVPQKRAAPENVPLSSRARRRKFRNAAVHTVRRADLSQAQRGVLVSC
TPGHEHHAFRDAVVLFSRFVSADQGPQSAQATDDQGTVRAVKPDNAAAGQ
GEKHEKNALENELAQLRKREGHAFTRVVADVKGAVFLRVNDQSVDVEHVV
EQALVEARESGNTGSRHCIRLIPVHATCYAKAESATTVALKVVKERFPPV
QQHGGVSFAIVFRARLNNSAKRDEFIQAIASAIHEYEPRYTVNLTKPDVV
LIVEVLKTSCCIGTFTKFYQLAKLNLREAACPSKPKDDKGEKQSAAVGQE
RDAKDSANSKQAGSPSKQASESAEKAKEACANNEPTAVAATESANTEATA
TVAAEAADAKEAVDGGDSGDDGATDVATTATEAVAADEAGDKCQAKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004114THUMP_dom
IPR040183THUMPD1-like