Ggra9072.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9072.t1
Unique NameGgra9072.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length135
Homology
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BLAST of Ggra9072.t1 vs. uniprot
Match: A0A2V3IRX5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX5_9FLOR)

HSP 1 Score: 114 bits (286), Expect = 2.730e-30
Identity = 65/133 (48.87%), Postives = 90/133 (67.67%), Query Frame = 0 
Query:    1 MSVLERAQPVIQTAQAELPAIQSALKQLFDVLKSIWNSVVESGLLKAIIDKIKSFFGGASAAIESLPQTVHEATEARAGGANGAAITGLVGGVVDNLQDKVDTAKDMLAGVTGQASKALNSAETTPLLKAEDN 133
            MS L RAQPVI+TA+ ELP IQ ALK LFDV KS+W SV+ESGLL AI +KI++  G A++A+ESLPQTV E T +RA  ++ + +T +           VD AK ++A  +G + +     ETTPLLK++++
Sbjct:    1 MSFLSRAQPVIETAREELPVIQQALKSLFDVAKSLWKSVIESGLLGAIFEKIRALLGSATSAVESLPQTVQE-TSSRAVDSSSSGLTNMXXXXXXXXXXXVDEAKGLIANASGGSGER---GETTPLLKSDES 129
The following BLAST results are available for this feature:
BLAST of Ggra9072.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRX52.730e-3048.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:109333..109737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9072.t1Ggra9072.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 109333..109737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9072.t1 ID=Ggra9072.t1|Name=Ggra9072.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=135bp
MSVLERAQPVIQTAQAELPAIQSALKQLFDVLKSIWNSVVESGLLKAIID
KIKSFFGGASAAIESLPQTVHEATEARAGGANGAAITGLVGGVVDNLQDK
VDTAKDMLAGVTGQASKALNSAETTPLLKAEDNS*
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