Ggra9071.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9071.t1
Unique NameGgra9071.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length258
Homology
BLAST of Ggra9071.t1 vs. uniprot
Match: A0A2V3IXK7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK7_9FLOR)

HSP 1 Score: 143 bits (361), Expect = 7.810e-39
Identity = 85/215 (39.53%), Postives = 113/215 (52.56%), Query Frame = 0
Query:   39 KQVASNPGVNAEQFRDLFRPPQGKMRQARYKLRWDWHLRNFLTALIPPAAMLVFFQLVALLDKPHVQLYETRFEGTDPISGNQSVLQTPVEGISPKEPSHPVKEEERYVFLRKILENRLNRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLEDELDRLQFLTSELIRKASESTNGPNRVEKARQLSKNMVRSTAK 253
            +Q+ASNPGVN EQF+ LFRP +GK+R  RYKLRWDWHLRNFLTALIPP AML+F+++V++     ++LY+ RFEG DPI+G      TP  G +   P+     EE    L+K ++ RL +                                                 LEDE++RL+   +   +K        NRVE+ARQLSK MVRS +K
Sbjct:   37 RQLASNPGVNIEQFKALFRPVEGKLRHPRYKLRWDWHLRNFLTALIPPGAMLIFYKIVSMFGDSALELYDARFEGMDPITGKIRGPSTPEPGATADLPTEITSREELITLLQKPMQERLRQ-------------------------------------------------LEDEIERLKARATAQEQKLEAKAEFSNRVERARQLSKRMVRSGSK 202          
BLAST of Ggra9071.t1 vs. uniprot
Match: R7QRZ5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRZ5_CHOCR)

HSP 1 Score: 71.2 bits (173), Expect = 2.200e-11
Identity = 56/157 (35.67%), Postives = 77/157 (49.04%), Query Frame = 0
Query:   13 RLLYRQLRDSSSEGKLCPHLQISRNVKQ--VASNPGVNAEQFRDLFRPPQGKMRQARYK---LRWDWHLRNFLTALIPPAAMLVFFQLVALLDKPHVQLYETRFEGTDPISGNQSVLQTPVEGISPKEPSHPVKE----EERYVFLRKILENRLNRS 160
            RLL  +L   S+   L  HL  SR V++   A+NPGV A QFR LF        + R +    RWDWHLRNFL ALIPPA +L+F ++          +Y+  F   DP  G+ +   TP    S +  +H   +    EER   L + L    +R+
Sbjct:    6 RLLVSRLPRHSTA--LTRHLSTSRGVRRPPAATNPGVTAAQFRALFDTSPASTARGRARPRHFRWDWHLRNFLMALIPPAVLLLFLRVATYQFGGDHAIYDKIF---DPAPGSPAA-HTPAPASSQEGLAHAALQGRHIEERLAHLERQLGGLQSRA 156          
The following BLAST results are available for this feature:
BLAST of Ggra9071.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXK77.810e-3939.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QRZ52.200e-1135.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:108121..108894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9071.t1Ggra9071.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 108121..108894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9071.t1 ID=Ggra9071.t1|Name=Ggra9071.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=258bp
MLALIRSGYPLRRLLYRQLRDSSSEGKLCPHLQISRNVKQVASNPGVNAE
QFRDLFRPPQGKMRQARYKLRWDWHLRNFLTALIPPAAMLVFFQLVALLD
KPHVQLYETRFEGTDPISGNQSVLQTPVEGISPKEPSHPVKEEERYVFLR
KILENRLNRSEGKDPISGKQSGLQTPAEAISSEGRSHTVKEEELHVFLHK
VLQDRLKPLEDELDRLQFLTSELIRKASESTNGPNRVEKARQLSKNMVRS
TAKDEVK*
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