Ggra9064.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9064.t1
Unique NameGgra9064.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length873
Homology
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BLAST of Ggra9064.t1 vs. uniprot
Match: A0A2V3IUQ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ8_9FLOR)

HSP 1 Score: 77.0 bits (188), Expect = 1.160e-10
Identity = 73/309 (23.62%), Postives = 140/309 (45.31%), Query Frame = 0 
Query:  418 LEEIVSESQNAIEALRTESKNAFVMLGAFHEWYGSYQHQDSSSLPLETLVRDLSELHGRRHSGILSNKIVELSLPESHKPNETSTNLQAELGTVLDLCRSLFQTLGKREGLLSRIVKELLGSSRRFESIVAEPGRLVQLTLAQVETMRTAVKKELTSLKSERETTSNMLT----------------------------GWREQLDAVLKTYKGLLSKKDEEIARIRAEQTTEKQRGTINEQKVEELKSELQQQLKLKEGLEKKSHDLEVCRTVLAQARKDLAKARQDGECLKITIERRDMEIDRLKSTL 698
            LE    E +     ++   KNA +++  F+ WY   QH ++  L LE ++   +     + +  + + +  LSLP      E   +L++EL + +   R L     +RE +L+  V+E+       + ++ E    ++  L Q +TM+T V  +L +L+S+ +  S  L                              W ++L+   K+++    +KDE IA++R +    KQ   ++  K+  L+SEL    K    L  K+  L+    +L + +++   + +  E LKI +E +D +I++LKS L
Sbjct:  423 LERSKQELKEQFNTMKGMVKNALLVVSTFYTWYNDLQH-NTDRLSLEKVILAWTRGRPNQLATQIRSLLNTLSLPGRRATREEFRDLESELSSAMGFVRDLVHKYMERETILAGTVQEMSCILDFLQKMLKEAQDGMKELLLQPKTMKTRVAVDLRALRSQHDVVSEFLRTLKQDRRITNELKAVMSQQRAHNEKELKNWSQRLEDAQKSHQTSQREKDECIAKLREQY---KQHIDLSSNKLRCLQSELDNAKKENAQLSTKNAKLKSFENLLNETKREYVYSLELNESLKIRLEAKDSDINKLKSEL 727
The following BLAST results are available for this feature:
BLAST of Ggra9064.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUQ81.160e-1023.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..315
NoneNo IPR availableCOILSCoilCoilcoord: 362..382
NoneNo IPR availableCOILSCoilCoilcoord: 656..676
NoneNo IPR availableCOILSCoilCoilcoord: 632..652
NoneNo IPR availableCOILSCoilCoilcoord: 415..435
NoneNo IPR availableCOILSCoilCoilcoord: 558..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 705..733
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 821..872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:72535..75856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9064.t1Ggra9064.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 72535..75856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9064.t1 ID=Ggra9064.t1|Name=Ggra9064.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=873bp
MNNGNDNFNLRLPPKPSGKRPSSLAHRRLTSSPPPRSVSARRPLPSVGHE
RRPVSNSAVETRTFAALTNLLRTNSSHPNEMHPPPSRRGVTSARRIDRCQ
LSRTDTPRHGPIRVDGERNIEGDERDLEPSSSPFRLVRGKHVSSPGMHFS
RSKDMSIRRSTPKQSEYHHEDELQPSSHDLGEREEPSNERRCENDSAEHT
DSGSCSESSVADEDGRDEGGFSTRVMSLYDNMSVSQQIPQQVYAILDECS
DRHDNMKRRLSKSRLKVAKLRAQVESAEEANESARKLYDESRDECKKLSS
KCGKLEEIIRDEKEKNGKECQALRESISREISVKTAKDMECEKVREELQY
LQSKYEKEIFARETYEKERDSACNELSKMKSSFAEKEREYNAQIRQEEAN
VSELSSYNDSMIQKTRRLEEIVSESQNAIEALRTESKNAFVMLGAFHEWY
GSYQHQDSSSLPLETLVRDLSELHGRRHSGILSNKIVELSLPESHKPNET
STNLQAELGTVLDLCRSLFQTLGKREGLLSRIVKELLGSSRRFESIVAEP
GRLVQLTLAQVETMRTAVKKELTSLKSERETTSNMLTGWREQLDAVLKTY
KGLLSKKDEEIARIRAEQTTEKQRGTINEQKVEELKSELQQQLKLKEGLE
KKSHDLEVCRTVLAQARKDLAKARQDGECLKITIERRDMEIDRLKSTLRL
KNQRAQTKDGDYEHSVCAPRHEDDELDEASPKELGEIRKTSLGKQKQAHS
SRLKLDKGRTARGRKQILAVADRGKGAKGGQFPQVAENDVGDGFIDEEDW
FKDQEATRTLVERDINGCEERGRHSVRIPPRSEKKTKKSYMAVEDCRTGK
KRQNPKSGSEAPKSKRFRAKYD*
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