Ggra9063.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9063.t1
Unique NameGgra9063.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length478
Homology
BLAST of Ggra9063.t1 vs. uniprot
Match: A0A2V3IRY4 (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR)

HSP 1 Score: 764 bits (1974), Expect = 5.120e-276
Identity = 405/477 (84.91%), Postives = 446/477 (93.50%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSRKMMDSPAGPDGAQGQSVGNRSQRRKSGKKKAQKKTAKRGFG 477
            MLFDSLTEKM ETVR++RGVDKIT+KNVAGAMKQVKRALLDADVNLRVVN L KQIK RAIG EV PGV PGQMLIKIMHEELT IMGKDQAPLA+R DG+PTV+LLAGLQGAGKTTAAAKLALYCLK+KRSVMLIAGDVYRPAAIDQLKTLG  I VDVFS+GT+ADPRDI+RKGIEKG  + IDTLI+DTAGRQVID+KLMKELKD+K IS  DETLLVVDAMTGQEAATLT++FNEEVGITGAILTKLDGDTRGGAALSVQQV+GAPIKF GVGE+VEKL+PFIPERMASRILGMGDVLTFVE+A+E+MDE+EAEKMT+RMMEAKFDFNDFLKQTKMIS+MGSLAGVMKMLPGVGSISS+KMAQAEAKLKLADSLIKSMT++ERTNPELL+SG SARSR+ RISKGAGRS+++AEDLV +F KMRDMMSRMS++M++   GP G+ GQ  GNRSQRRK+ KKKAQK+TAKRGFG
Sbjct:    1 MLFDSLTEKMGETVRKLRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDKRSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKVEKLEPFIPERMASRILGMGDVLTFVERAKEQMDEREAEKMTKRMMEAKFDFNDFLKQTKMISSMGSLAGVMKMLPGVGSISSAKMAQAEAKLKLADSLIKSMTVKERTNPELLYSGGSARSRILRISKGAGRSRDDAEDLVKDFLKMRDMMSRMSKQMVNGQGGPGGS-GQPAGNRSQRRKAAKKKAQKRTAKRGFG 476          
BLAST of Ggra9063.t1 vs. uniprot
Match: R7QHF1 (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR)

HSP 1 Score: 645 bits (1664), Expect = 4.520e-229
Identity = 342/464 (73.71%), Postives = 407/464 (87.72%), Query Frame = 0
Query:   17 MRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGS-ISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSRKMMDSPAGP--DGAQGQSVGNRSQRRKSGKKKAQKKTAKRGFG 477
            MRGVDKIT+KNV GAMK VKRALLDADVNLRVVN+L KQIK RA+G +VTPGV+PGQML+KIMHEELT IMG +QAPLA R DG+PTV+LLAGLQGAGKTTAAAKLALYCLKE+RSVM+IA DVYRPAAIDQLKTLG SIEVDVF +GT+ +PR+IVRKG+++G    I+T+I+DTAGRQVID+KLMKELKDIK++S ADETLLVVDAMTGQEAATLT++FN+EVGITGAILTKLDGDTRGGAALSVQQV+G+PIKF GVGE+V+KL+PF PERMASRILGMGDVLT VEKAQ+ MDE EAEKMTR+MME KFDFNDFLKQTKM+S MGSL G+MKM+PG+G  I+ SK+ +AE KLK+ADS+IKSMT QER NPELL++  S+RSR+ RI+ G+GRS  +A++++S+F+KMR MM RMS++M+  P G   +GA G    NR+QRR++ KKKA +   +RGFG
Sbjct:    1 MRGVDKITEKNVTGAMKDVKRALLDADVNLRVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEERSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKVQKLEPFYPERMASRILGMGDVLTIVEKAQDVMDEAEAEKMTRKMMENKFDFNDFLKQTKMLSQMGSLGGLMKMMPGIGGQINESKLKEAEVKLKVADSIIKSMTKQERGNPELLYTAPSSRSRVERIANGSGRSLAQAKNMISDFQKMRTMMQRMSKQMVGGPDGTPAEGAPGSK--NRAQRRRNAKKKALRGGERRGFG 462          
BLAST of Ggra9063.t1 vs. uniprot
Match: A0A5J4YVF1 (Signal recognition particle protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF1_PORPP)

HSP 1 Score: 559 bits (1441), Expect = 8.890e-194
Identity = 307/488 (62.91%), Postives = 379/488 (77.66%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDG--KPTVILLAGLQGAGKTTAAAKLALYCLKEK--RSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSRKMMD------SPAGPDGAQGQSVG-NRSQRRKSGKKKAQKKTAKRGFG 477
            MLFDSL  +M ET+R+++G DK+T+KNV  ++K+V+RALLDADVNL+VVNSL K +K RA+GE+V  GVKPGQ  IKI+++EL  IMG +  PLAR+      PTVILLAGLQGAGKTTAAAKLALYC  E   R V+L A DVYRPAAI+QLKTLG SI+ +VF++GT+ +P  I R+ I     +  DT+I+DTAGRQVID+KLM ELK +K   + DE LLVVDAMTGQEAA LT+ FN+ VGITGAILTKLDGDTRGGAALSV+QV+G PIKF GVGE+VEKL+PF PERMASRILGMGDVL+FVEKAQE+MDE EA ++T++M+EAKFDF DF+KQT+MI+ MGSL G+MKM+PG+  IS +++  AE +LKLA SLI SMT  ER NP+LL    +ARSRL RI+ G+GRS  +A  L+S+F++MR MM+RM + MMD      +PAG  G  G + G NRS RRK GKKK   K   +GFG
Sbjct:   66 MLFDSLAGQMSETMRKLQGSDKLTEKNVESSVKEVRRALLDADVNLKVVNSLIKDVKARALGEKVLEGVKPGQQFIKIIYDELARIMGSEATPLARKDASAESPTVILLAGLQGAGKTTAAAKLALYCKSEAKPRRVLLCACDVYRPAAIEQLKTLGASIDTEVFAMGTDVEPERIAREAISYAKKNKFDTVIVDTAGRQVIDTKLMAELKRVKNSVTPDEILLVVDAMTGQEAANLTRAFNDAVGITGAILTKLDGDTRGGAALSVKQVSGRPIKFVGVGEKVEKLEPFYPERMASRILGMGDVLSFVEKAQEQMDEAEARRLTQKMVEAKFDFEDFVKQTEMITKMGSLGGMMKMIPGMAGISDAQLTAAERQLKLARSLINSMTRSERRNPDLLIKDRTARSRLQRIAAGSGRSSKDASQLISDFQRMRTMMARMGKTMMDGGPGAAAPAGMGGMPGMAGGTNRSARRKEGKKKQASKPTGKGFG 553          
BLAST of Ggra9063.t1 vs. uniprot
Match: A0A6T5W5G4 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W5G4_9RHOD)

HSP 1 Score: 559 bits (1440), Expect = 1.180e-193
Identity = 311/511 (60.86%), Postives = 380/511 (74.36%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEK--------------------RSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSRKMM--------DSPAGPDGAQGQSV------GNRSQRRKSGKKKAQKKTAKRGFG 477
            MLFD+L  K+ ETVR+++G D+I +KNVA AMK VKRALLDADVNLRVVN L K++++RA+G EV PGV PGQ  +KI++EEL+ +MG D  PLA      P VILLAGLQGAGKTTAAAKLALYC                        + V+L+A DVYRPAAI+QLKTLG  IE +VFSLGTE  P  I ++G+E    +  DT+I+DTAGRQVIDS LM ELK +K   S  ETLLVVDAMTGQEAA LT+ FN++VGI+GAILTKLDGDTRGGAALSVQQV+G PIKF GVGE VEKL+PF PERMASRILGMGDVL+FVEKAQE ++EK+A +MT++M++A+FDF+DFLKQT M+S MGS AG+MKMLPG+  I  +++A AEAKLK++ S+I+SMT  ER  P+LL S  SARSRL+RI+ GAGRS  +A  L+S+F++MR MM+RMSR M+        D  A   G +GQSV      GNRS RRKS KKK +    K+GFG
Sbjct:   42 MLFDTLAGKLGETVRKLQGSDRINEKNVAAAMKDVKRALLDADVNLRVVNKLVKEVQQRAVGMEVLPGVTPGQQFVKIIYEELSRVMGADATPLASPTGSDPVVILLAGLQGAGKTTAAAKLALYCKAPPAPPVGADGAAQNAVVARAPAKKVLLVAADVYRPAAIEQLKTLGARIETEVFSLGTELSPEQIAKQGLEYARKNGFDTVIVDTAGRQVIDSNLMSELKRVKAAVSPSETLLVVDAMTGQEAANLTQAFNDQVGISGAILTKLDGDTRGGAALSVQQVSGKPIKFIGVGETVEKLEPFYPERMASRILGMGDVLSFVEKAQEAVEEKQAAEMTKKMLQAQFDFDDFLKQTAMMSKMGSFAGMMKMLPGMSGIDETQLASAEAKLKVSTSMIQSMTKAERRRPDLLISDRSARSRLSRIANGAGRSFTDANTLISDFQRMRTMMARMSRTMVGNAMNSGVDPSAAMSGLEGQSVLQPGMGGNRSARRKSAKKKEKPTAQKKGFG 552          
BLAST of Ggra9063.t1 vs. uniprot
Match: F4XKI5 (Signal recognition particle protein n=24 Tax=Moorena TaxID=1155738 RepID=F4XKI5_9CYAN)

HSP 1 Score: 492 bits (1267), Expect = 1.540e-168
Identity = 257/446 (57.62%), Postives = 346/446 (77.58%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSRKMMDSPAGPDG 447
            +FD+L E++E+  +++RG DKI+  N+  A+K+V+RALL ADVNL+VV     +++ +A G EVT GV+P Q  IKI+++EL  +MG+   PLA+  D  PTV+L+AGLQG GKTTA+AKLAL+  K++RS +L+A DVYRPAAIDQL TLG  I+V VF LGTEADP +I R+G+E+    +IDT+IIDTAGR  ID ++M EL  IK      +TLLVVDAMTGQEAATLT+TF+E++GITGAIL+KLDGD+RGGAALSV+Q++G PIKF GVGE+VE LQPF P+RMASRILGMGDVLT VEKAQEE+D  +AE+M ++M+EAKFDF+DFLKQ +++  MGSL G+MK++PG+G +SSS++ Q E KLK ++++I SMT +ER NP+LL   AS+ SR  RI++G+G ++ +   LVSEF +MR +M +M +  M +  G  G
Sbjct:    1 MFDALAERLEDAWKKLRGQDKISSSNIQDALKEVRRALLSADVNLQVVKDFVAEVEAKAQGSEVTSGVRPDQQFIKIVYDELVQVMGETNVPLAQA-DTPPTVVLMAGLQGTGKTTASAKLALHLRKQERSCLLVATDVYRPAAIDQLVTLGQQIDVPVFELGTEADPVEIARQGVERAKAMAIDTVIIDTAGRLQIDQEMMGELSRIKETVQPHDTLLVVDAMTGQEAATLTRTFHEQIGITGAILSKLDGDSRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDIADAEQMQQKMLEAKFDFSDFLKQMRLLKNMGSLGGLMKLVPGMGKLSSSQLQQGETKLKQSEAMISSMTSEERRNPDLL---ASSPSRRRRIAQGSGHTEKDVRGLVSEFTRMRSLMQQMGQGQMPAMGGLGG 442          
BLAST of Ggra9063.t1 vs. uniprot
Match: A0YSB3 (Signal recognition particle protein n=3 Tax=Oscillatoriaceae TaxID=1892254 RepID=A0YSB3_LYNSP)

HSP 1 Score: 488 bits (1255), Expect = 1.050e-166
Identity = 250/435 (57.47%), Postives = 333/435 (76.55%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSR 436
            +FD+L E+++   +++RG DKIT+ N+  A+K V+RALL+ADVNL+VV     ++  +A G +V  GV+PG+  +KI+H+EL  +MG+   PLA   D  PT++L+AGLQG GKTTA AKLAL+  KE R+ +++A DVYRPAAIDQLKTLG  IEV VF LG++ADP +I R+G+E      +DT+IIDTAGR  ID  +M EL  IK +    +TLLVVDAMTGQEAATLT+TFNE++GI+GAILTKLDGD+RGGAALS+++++GAPIKF GVGE+VE LQPF PERMASRILGMGDVLT VEKAQEE D  +AEKM +++MEAKFDF DFLKQT+++  MGSL G+ K++PG+  IS  ++ Q E +LK ++++I SMT +ER NPE+L   AS+ SR  RI+KG+G S+ +   LV +F+KMR MM +M +
Sbjct:    1 MFDALAERLDSAWKKLRGQDKITESNIQDALKDVRRALLEADVNLQVVKEFVAEVGEQAQGSQVFSGVRPGEQFVKIVHDELVKVMGESNVPLATA-DSPPTIVLMAGLQGTGKTTATAKLALHLRKENRTALMVATDVYRPAAIDQLKTLGQQIEVPVFELGSDADPVEIARQGVEYAKTQGVDTVIIDTAGRLQIDQDMMAELARIKAVVQPHDTLLVVDAMTGQEAATLTQTFNEQIGISGAILTKLDGDSRGGAALSIRRISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDLADAEKMQQKIMEAKFDFTDFLKQTRLMKNMGSLGGLAKLIPGMNKISKEQLEQGEQQLKRSEAMINSMTTEERKNPEVL---ASSPSRRRRIAKGSGHSEKDVMRLVGDFQKMRGMMQQMGQ 431          
BLAST of Ggra9063.t1 vs. uniprot
Match: K9RTX2 (Signal recognition particle protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RTX2_SYNP3)

HSP 1 Score: 488 bits (1255), Expect = 1.050e-166
Identity = 250/432 (57.87%), Postives = 338/432 (78.24%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSR 433
            +FD+L +++E   + +RG DKI++ N+  A+++V+RALL+ADVNL+VV +  +++++RA+G EV  GV+P Q  IKI+++EL  +MG+   PLA+     PTVIL+AGLQGAGKTTA AKLAL+  KE R+ +L+A D+YRPAAIDQL TLG  I V VF LGTE +P +I R+GI KG    +DT+I+DTAGR  ID+ +M EL DIK   + DE LLVVDAMTGQEAA LT+ F+E++GITGAILTK+DGDTRGGAALSV+Q++G PIKF GVGE+VE LQPF P+R+ASRILGMGDVLT VEKAQEE+D  +AE MTR+++EA+FDFNDFLKQT+++  MGSL G+MK++PG+G IS+ ++ Q E++LK A+S+I SMT QER NP+LL   A++ SR  R+++G+G    +   LVS+F++MR MM +
Sbjct:    1 MFDALADRLESAWKSLRGQDKISETNIQDALREVRRALLEADVNLQVVKTFIEEVRQRALGAEVVAGVRPDQQFIKIVYDELVTVMGESNVPLAQASQA-PTVILMAGLQGAGKTTATAKLALHLRKENRTTLLVATDIYRPAAIDQLLTLGKQINVPVFELGTEVNPVEIARQGIAKGRELGVDTVIVDTAGRLQIDADMMAELGDIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMTRKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINSMTRQERENPQLL---ANSPSRKKRVAQGSGHKLEDVAKLVSDFQRMRSMMQQ 428          
BLAST of Ggra9063.t1 vs. uniprot
Match: A0A2T1G176 (Signal recognition particle protein n=13 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1G176_9CYAN)

HSP 1 Score: 487 bits (1253), Expect = 1.660e-166
Identity = 254/435 (58.39%), Postives = 332/435 (76.32%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSR 436
            +F++L +++E T +++RG +KI++ N+  A+K+V+RALL+ADVNL+VV +   ++  +A G EV  GV+P Q  IKI+H+EL  +MG+   PLA    G PTVIL+AGLQG GKTTA AKLAL+  K+  + +L+A D+YRPAAIDQL TLG  I+V VF LGT+ DP +I R+G+E G    +DT+I+DTAGR  ID ++M EL  IK      ETLLVVDAMTGQEAA LT+TF+E++GITGAILTKLDGD+RGGAALSV+Q++GAPIKF GVGE+VE LQPF P+RMASRILGMGDVLT VE+AQEE D  +AEKM  +M+ AKFDF DFLKQT+++  MGSL G+MKM+PG+  +S  +M Q E +LK  +++I SMT QER NPELL   AS+ SR  RI KGAG ++N+   LVS+F+KMR MM +MS+
Sbjct:    1 MFEALADRLESTWKKLRGQNKISESNIQDAIKEVRRALLEADVNLQVVKNFVGEVTAKAQGAEVVSGVRPDQQFIKIVHDELVRVMGETNVPLATAESG-PTVILMAGLQGTGKTTATAKLALHLRKQNLTALLVATDIYRPAAIDQLLTLGKQIDVPVFELGTDTDPVEIARQGLEHGKQLGVDTIIVDTAGRLQIDQEMMAELARIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVERAQEEFDIADAEKMQEKMLTAKFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINSMTTQERRNPELL---ASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQMSQ 431          
BLAST of Ggra9063.t1 vs. uniprot
Match: B8HVM2 (Signal recognition particle protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HVM2_CYAP4)

HSP 1 Score: 487 bits (1254), Expect = 2.020e-166
Identity = 248/435 (57.01%), Postives = 343/435 (78.85%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSR 436
            +FD+L+E++E   +++RG DKI++ N+  A+++V+RALL+ADVNL+VV    ++++ +A+G EV  G++P Q  IKI+++EL  +MG+  APLA   +  PT++L+AGLQG GKTTAAAKLAL+  K+ RS +L+A D+YRPAAIDQL TLG  I+V VF LGTE +P +I R+G+E G + ++DT+I+DTAGR  ID ++M EL  IKT  +  ETLLVVDAMTGQEAA LT+TF+E++GITGAILTK+DGDTRGGAALSV+Q++G PIKF GVGE+VE LQPF P+R+ASR+LGMGDVLT VEKAQEE+D  +AEK++R+++EAKFDF DFLKQT+++  MGSL G+MK++PG+  IS+ ++ + E +LK A+S+I SMT  ER NPELL   +S+ SR  RI+KG+G S  +   LVS+F+KMR +M +M +
Sbjct:    1 MFDALSERLEAAWKKLRGQDKISETNIQEALREVRRALLEADVNLQVVKDFIEEVRVKALGAEVIAGIRPDQQFIKIVYDELVQVMGETNAPLAEA-ETAPTIVLMAGLQGTGKTTAAAKLALHLRKQNRSALLVATDIYRPAAIDQLVTLGKQIDVPVFQLGTEVNPVEIARQGVEHGRSLNVDTVIVDTAGRLQIDPEMMAELAQIKTTIAPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRVLGMGDVLTLVEKAQEEVDLADAEKLSRKILEAKFDFTDFLKQTRLLKNMGSLGGIMKLIPGMNKISADQLQKGEDQLKRAESMINSMTPDERRNPELL---SSSPSRRRRIAKGSGHSLEDVSKLVSDFQKMRSLMQQMGQ 431          
BLAST of Ggra9063.t1 vs. uniprot
Match: D4ZMY5 (Signal recognition particle protein n=8 Tax=Microcoleaceae TaxID=1892252 RepID=D4ZMY5_ARTPN)

HSP 1 Score: 486 bits (1252), Expect = 2.130e-166
Identity = 254/435 (58.39%), Postives = 331/435 (76.09%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVNSLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDGKPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDSKLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTKLDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASARSRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSR 436
            +FD+L+E++E   +++RG DKIT+ N+  A+K+V+RALL+ADVNL VV    K++  +A G +V  GVKPGQ  IKI+H+EL  +MG+   PLA      PT++L+AGLQG GKTTA+AKLAL+  KE RS +L+A DVYRPAAIDQL TLG  I V VF LG +ADP +I R+GIE G    IDT+IIDTAGR  ID  +M EL  IK      ETLLVVDAMTGQEAATLT+TFN+ +GITGAILTK+DGD+RGGAALS+++V+GAPIKF GVGE+VE LQPF PERMASRILGMGD+LT VEKA+EE D  +AEKM  +++EAKFDF DFLKQT+++  MGSL G++K++PG+  IS  ++   E++LK ++++I SMTI+ER NPELL +  S R R+A   KGAG ++ +   LVS+F++MR +M +M R
Sbjct:    1 MFDALSERLESAWKKLRGQDKITESNIQEALKEVRRALLEADVNLMVVKDFIKEVGVQAQGSQVVSGVKPGQQFIKIVHDELVKVMGESNVPLAEAQQ-PPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVA---KGAGYAEKDVMRLVSDFQRMRSLMQQMGR 431          
The following BLAST results are available for this feature:
BLAST of Ggra9063.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRY45.120e-27684.91Signal recognition particle protein n=1 Tax=Gracil... [more]
R7QHF14.520e-22973.71Signal recognition particle SRP54 homolog ffh n=1 ... [more]
A0A5J4YVF18.890e-19462.91Signal recognition particle protein n=1 Tax=Porphy... [more]
A0A6T5W5G41.180e-19360.86Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
F4XKI51.540e-16857.62Signal recognition particle protein n=24 Tax=Moore... [more]
A0YSB31.050e-16657.47Signal recognition particle protein n=3 Tax=Oscill... [more]
K9RTX21.050e-16657.87Signal recognition particle protein n=1 Tax=Synech... [more]
A0A2T1G1761.660e-16658.39Signal recognition particle protein n=13 Tax=Cyano... [more]
B8HVM22.020e-16657.01Signal recognition particle protein n=1 Tax=Cyanot... [more]
D4ZMY52.130e-16658.39Signal recognition particle protein n=8 Tax=Microc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..87
e-value: 3.4E-27
score: 106.3
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..83
e-value: 5.2E-17
score: 61.8
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 102..297
e-value: 1.3E-97
score: 340.3
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 102..297
e-value: 3.0E-72
score: 242.4
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 270..283
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 101..248
e-value: 5.7E-8
score: 42.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..286
e-value: 1.3E-112
score: 377.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..355
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 311..443
e-value: 1.1E-30
score: 108.4
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 328..431
IPR004780Signal recognition particle proteinTIGRFAMTIGR00959TIGR00959coord: 3..432
e-value: 3.3E-157
score: 521.7
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 3..448
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 4..307
e-value: 1.3E-112
score: 377.6
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 328..431
e-value: 3.8E-23
score: 82.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..477
NoneNo IPR availableCDDcd18539SRP_Gcoord: 103..295
e-value: 2.48754E-100
score: 297.203
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 3..448
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..452
score: 31.452761

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:70465..71898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9063.t1Ggra9063.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 70465..71898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9063.t1 ID=Ggra9063.t1|Name=Ggra9063.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=478bp
MLFDSLTEKMEETVRRMRGVDKITDKNVAGAMKQVKRALLDADVNLRVVN
SLTKQIKRRAIGEEVTPGVKPGQMLIKIMHEELTAIMGKDQAPLARRMDG
KPTVILLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLK
TLGTSIEVDVFSLGTEADPRDIVRKGIEKGVNDSIDTLIIDTAGRQVIDS
KLMKELKDIKTISSADETLLVVDAMTGQEAATLTKTFNEEVGITGAILTK
LDGDTRGGAALSVQQVAGAPIKFTGVGERVEKLQPFIPERMASRILGMGD
VLTFVEKAQEEMDEKEAEKMTRRMMEAKFDFNDFLKQTKMISTMGSLAGV
MKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIQERTNPELLHSGASAR
SRLARISKGAGRSKNEAEDLVSEFRKMRDMMSRMSRKMMDSPAGPDGAQG
QSVGNRSQRRKSGKKKAQKKTAKRGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013822Signal_recog_particl_SRP54_hlx
IPR000897SRP54_GTPase_dom
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR036891Signal_recog_part_SRP54_M_sf
IPR004780SRP
IPR042101SRP54_N_sf
IPR004125Signal_recog_particle_SRP54_M
IPR022941SRP54