Ggra9059.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9059.t1
Unique NameGgra9059.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Homology
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BLAST of Ggra9059.t1 vs. uniprot
Match: A0A2V3IRZ4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ4_9FLOR)

HSP 1 Score: 184 bits (467), Expect = 3.720e-50
Identity = 92/152 (60.53%), Postives = 120/152 (78.95%), Query Frame = 0 
Query:   55 CSNLPSVVPDSSLLARTENFQRVRLTLQVAGPNMTNTCQLKGDVVQRFVNLSAMSTLSNAHLWFVTSIEDGPAVYEDGSTLVVVEE-----ELGATESVSPQVSSSPEG-FEELFPGSVIFGITVFLNPFSVELVEAAYVDYVRSQNIVRAL 200
            C NLP +VPDSSLLART+NFQRVR+ +QVAGPN+T++C L   + QRF+NLSAM+TLSN +LWF+TSIEDGPAVY+  S+LV++E+     ++  T S SP  S S E   +EL+PGSV+F +T FL+PFSVEL   AY++Y++SQNIVRAL
Sbjct: 2146 CPNLPPIVPDSSLLARTDNFQRVRMGMQVAGPNLTSSCDLTNVIAQRFINLSAMNTLSNRNLWFITSIEDGPAVYDGESSLVLIEDLEEVTDIEITLSNSPSPSQSLEASVQELYPGSVVFRVTAFLDPFSVELAIGAYIEYIQSQNIVRAL 2297
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BLAST of Ggra9059.t1 vs. uniprot
Match: R7QNU8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNU8_CHOCR)

HSP 1 Score: 127 bits (319), Expect = 2.000e-30
Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 0 
Query:   61 VVPDSSLLARTENFQRVRLTLQVAGPNMTNTCQLKGDVVQRFVNLSAMSTLSNAHLWFVTSIEDGPAVYEDGSTLVVVEE--ELGAT-ESVSPQVSSSPEGFEELFPGSVIFGITVFLNPFSVELVEAAYVDYVRSQNIVRALRRRGSR 206
            +V D   L  T N+QRV + +QVAGPN+TNTC L   V++RF+N SA +T SNA  W+VT +EDGPAVY    +LV + E  E G+  E+ SP  S++ +   EL+ GSVIF +  ++ P SV+L   +Y+DYV SQ IV AL+ +G R
Sbjct:  464 LVHDMRELNHTNNYQRVSMQIQVAGPNVTNTCGLTERVLERFINFSAANTQSNARQWYVTRVEDGPAVYSGQFSLVTIVEPDEFGSVNETGSPSPSATAKA-AELYRGSVIFAVVAYMKPASVDLAAGSYMDYVMSQRIVYALQDQGFR 611
The following BLAST results are available for this feature:
BLAST of Ggra9059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRZ43.720e-5060.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNU82.000e-3047.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:59712..60332 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9059.t1Ggra9059.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 59712..60332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9059.t1 ID=Ggra9059.t1|Name=Ggra9059.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MISISPEISAMVTVMPSNVPTPTAVFPAEPTPSVAVSIMIWTPSPDPTVT
DTDLCSNLPSVVPDSSLLARTENFQRVRLTLQVAGPNMTNTCQLKGDVVQ
RFVNLSAMSTLSNAHLWFVTSIEDGPAVYEDGSTLVVVEEELGATESVSP
QVSSSPEGFEELFPGSVIFGITVFLNPFSVELVEAAYVDYVRSQNIVRAL
RRRGSR*
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