Ggra9058.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9058.t1
Unique NameGgra9058.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Homology
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3IUR8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 300 bits (767), Expect = 1.000e-99
Identity = 130/203 (64.04%), Postives = 153/203 (75.37%), Query Frame = 0
Query:   50 GQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 252
            GQ+F +KYHRNNHGPGGFIR+SLV  +D M K +H RNAFHYSCWGA+ ++A PNELSTD+FGF  VGNDGE HSAP+AYY +F T+P  VPDG Y+LGWVW+GGT   PI+DN+   P   G+F DYWACSYV +KGG  L+ S DPVFVNDM  FS++GCMA ND PG CS EPC    FYRKP+PF  G KP  +T   F
Sbjct:   46 GQQFVVKYHRNNHGPGGFIRLSLVTLKDAMSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Ggra9058.t1 vs. uniprot
Match: R7QEV6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 272 bits (695), Expect = 9.360e-87
Identity = 122/225 (54.22%), Postives = 153/225 (68.00%), Query Frame = 0
Query:   29 QPISPGYCRLED-DPKLSCADAGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 252
            + I  GY   +  D   +    GQ   +KY RNNHGPGGFIR++LV PE +MDK  H +NAF+Y+CWGA  + A  NE+  D+FGF+ VG+DGE+HS PK YY+  + IPSVVPDGKYVLGWVWYGG G +  + N + EP P+GYFGDYW+CSYV + GG  L   + PVF NDM G+S  GCM+AND PG CS EPC V + Y+ PRPF  G  P  +T + F
Sbjct:    2 RAIEGGYSNFDSPDNPAAVYQRGQTVRMKYTRNNHGPGGFIRLTLVAPEKMMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGS-AEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQF 225          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3J1Z2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 263 bits (673), Expect = 7.710e-84
Identity = 119/257 (46.30%), Postives = 160/257 (62.26%), Query Frame = 0
Query:   22 HSTISGPQPISPGYCRLEDDPKLSCADA----------------------------GQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDN--KKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPIT 248
            HS ++ PQ +SP  CR+  + K    +                             GQR  +KY RNNHGPGGFIR+++V    +MDKA+HERNAFHYSCWGA  ++A P+EL TD FG++ VGNDGE+H   + YY+A ++IP V+PDG YVLGWVW+GG GS P+  N  +  +P P GY+ D W+C+YV ++GGL L  +Y P F ND+  ++ EGC+AAND PG C+ EPC     ++KPR F  G  P P+T
Sbjct:    5 HSIMTEPQSVSPRDCRVGGEAKSGIDNCHGPCDLRAIQGGYANHASPDNPSAVYSRGQRITVKYTRNNHGPGGFIRLTIVPLGSMMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGICTVEPCYTPGIFQKPRNFKAGSYPSPLT 261          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3IS62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 255 bits (652), Expect = 1.450e-80
Identity = 127/283 (44.88%), Postives = 165/283 (58.30%), Query Frame = 0
Query:    1 MSSMQYTLVA-TALIFAHTVLCHSTISGPQPISPGYCRLEDDPK------------------------------LSCADAGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 252
            M S  + LV  TAL+ AH     S ++ PQ  SP  CRL  + +                               +    GQR  IKY RNNH PGGFIR++ V+P  IMD+  H RNAFHYSCWGA+   A+PNEL  D FGFT+ G+DG +H   K YY+  ITIP+V+PDG YVLGW WYGGTG N         P  + YFGDY++CS+V V+GG + +++Y P F+NDM  FS+ GCM++ D  G C++EPC   AF+R+PR F  G+ P P+T   F
Sbjct:    8 MISFVFLLVCQTALVSAH-----SQMTQPQSTSPKTCRLGGEAQHGIDNCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGG-EYTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALF 284          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3IFC9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 3.090e-80
Identity = 106/174 (60.92%), Postives = 133/174 (76.44%), Query Frame = 0
Query:   79 MDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 252
            M+KA+H+ NAFHYSCWGA   +A  +EL  D++GFT VG+DGE+H APK YY   +TIP+ +PDG YV+GWVW+GGTG   I+ N+  EP+PWGYFGDYWACS+V V+GG  LS SY PVF NDM  +S EGCM+AN+ PGTC+ EPC V   Y+KPRPFT+G+ P P+T  NF
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 174          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3IBQ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ8_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 1.810e-45
Identity = 78/175 (44.57%), Postives = 106/175 (60.57%), Query Frame = 0
Query:   79 MDKAIHERNAFHYSCWGAYTREAKPNELSTDKFG-FTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 252
            M+KA+H+ NAFH    G    + K + +S+ +    ++    GE+H APK YY   +TIP+ +PDG YV+GWVW+GGTG   I+ N+  EP+PW              K G    + Y PVF NDM  +S EGCM+AN+ PGTC+ EPC V   Y+KPRPFT+G+ P P+T  NF
Sbjct:    1 MEKAVHQHNAFHLQLLGRQF-QFKRHPMSSKRIDTVSLCWQHGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWVILATIGHVRSFASKVGSTF-RLYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 173          
BLAST of Ggra9058.t1 vs. uniprot
Match: R7QJR3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 132 bits (332), Expect = 7.970e-33
Identity = 67/179 (37.43%), Postives = 97/179 (54.19%), Query Frame = 0
Query:   50 GQRFPIKYHRNNHGPG--GFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPC 226
            G++  + +HRNNHG G  GF+R++LV  + +MD   H++  F  SCW +   + K            + GND E  +     Y A IT+P+  PDG YVLGW WYGG       D K        +FGDY++CS+V ++GG +LS S  PVF   +     +GC+++ D  G C +EPC
Sbjct:   73 GEQKTVSWHRNNHGKGESGFVRLTLVPVDKMMDSRAHKKFTFQISCWSSGLHKCKSRNKH-------VCGNDKEGMA-----YRAPITVPTAYPDGIYVLGWAWYGGG------DFKHDS-----FFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGVCKREPC 228          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3IRK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRK5_9FLOR)

HSP 1 Score: 126 bits (317), Expect = 3.160e-30
Identity = 74/228 (32.46%), Postives = 109/228 (47.81%), Query Frame = 0
Query:   27 GPQPISPGYCRL------EDDPKLSCADAGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYR-KPRPFTKGKKPRPI 247
            GP P+   Y RL      E +P  +    G +  +++HR+NH   GF+R+ LV  + +MDK  HE+ AFH+ C              T        GND E  +  K      + +P+  PDG YV GW WYGG       D + +      +FGDY++CS+V +KGG+ ++ +Y+P +           C+++ D  G C KEPC V   Y  +P  F  G KP  I
Sbjct:   54 GPCPLPDDYGRLNHPWINEHNPAETWR-RGDKVKVRWHRDNHDGTGFVRLVLVPVDKMMDKKAHEKYAFHFLCMNEGLHRCPDRSYDT-------CGNDAEGMAWQKE-----VEVPTSYPDGVYVFGWSWYGGG------DYRAMS-----FFGDYYSCSFVEIKGGVAVTDAYEPTW-------DGHKCVSSTDRLGVCWKEPCHVGRMYEMEPAEFKNGIKPEAI 250          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A1X6P9A5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9A5_PORUM)

HSP 1 Score: 119 bits (297), Expect = 1.880e-29
Identity = 71/188 (37.77%), Postives = 94/188 (50.00%), Query Frame = 0
Query:   54 PIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKG 241
            P+KY +NNH  GGF+R++LV P+D  +   H RNA+ +SCW +Y  E  PN       G    GND          Y   +TIP V PDG Y+LG+ WYGGTG                + G YW+C+ V +KGG  L KSY P FVN   G     C    +  G C++EPC+    +  P+    G
Sbjct:    2 PLKYFKNNH-EGGFLRLTLVHPKDRYNHQAHTRNAWRWSCW-SYGEENCPNR------GAKECGNDERGRR-----YKQQVTIPPVFPDGLYILGFAWYGGTG----------------WQGTYWSCAEVRIKGG-PLQKSYQPQFVNHRDG----RCQNNANALGQCTREPCKRRVRWGPPQELKTG 155          
BLAST of Ggra9058.t1 vs. uniprot
Match: A0A2V3IVU4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVU4_9FLOR)

HSP 1 Score: 117 bits (292), Expect = 3.910e-27
Identity = 82/247 (33.20%), Postives = 115/247 (46.56%), Query Frame = 0
Query:    4 MQYTLVATALIFAHTVLCHSTISGPQPISP-GYCRLEDDPKLS------CAD-----------------AGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPC 226
            M+  L AT +  A++   HS ++ P+PIS    CR+  +P         C D                  G R  + Y +NNH  GGF+R++LV  +++M    HE  AFHYSCW +        E   D       G D +  +     Y   IT+P++ PDG YVLGW WYGG   +             G +GDY+ CSYV ++GG  L+ +Y  +FV   +    +GC AA D  G C  EPC
Sbjct:    2 MKAVLFATLVAAAYS---HSFLTVPEPISKVETCRIGGNPGWESYCGGPCPDYNFRYDMRAENPAATWERGSRVTVHYSKNNH-VGGFMRLTLVPLDEMMRTEAHEALAFHYSCWSSELYYCDNKEQHRD------CGYDRDNLA-----YKTTITVPTIYPDGVYVLGWSWYGGGEGH-------------GDYGDYYDCSYVRIQGG-PLTDTYHAMFVPGPR--YPDGCQAAVDRLGMCPTEPC 217          
The following BLAST results are available for this feature:
BLAST of Ggra9058.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IUR81.000e-9964.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV69.360e-8754.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J1Z27.710e-8446.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS621.450e-8044.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFC93.090e-8060.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBQ81.810e-4544.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJR37.970e-3337.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IRK53.160e-3032.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P9A51.880e-2937.77Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IVU43.910e-2733.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:58311..59224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9058.t1Ggra9058.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 58311..59224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9058.t1 ID=Ggra9058.t1|Name=Ggra9058.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MSSMQYTLVATALIFAHTVLCHSTISGPQPISPGYCRLEDDPKLSCADAG
QRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTRE
AKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWV
WYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFV
NDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSK
NF*
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