Ggra9053.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9053.t1
Unique NameGgra9053.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length234
Homology
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BLAST of Ggra9053.t1 vs. uniprot
Match: A0A2V3IRW3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW3_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 1.850e-43
Identity = 99/230 (43.04%), Postives = 130/230 (56.52%), Query Frame = 0 
Query:    1 MPSRRVNVFARSDGSCLHDVIWQPQSDRPRPAAHHPPTQITADKIWPIIHNFMSLSREVD-GGPLRRLVFRNPQDYAPTVRKFDPVVQPAEKSIAPVVIHVLSDTRFVVTVTEQLPDYSLFDQ----SPYSSA---FSLGEFCETILDLLRKAHAAFVAAQSTVAEPGRDDAPSSPLAQPSATSHDSAVRSANSKEASSKQVQEDVDTLRKVVEQSTIAEMIDNTMKLVQ 222
            MP+RR+NVFAR DG+ LHDV+ +  +  P   +   P+Q++A  IWPI+HNF +LSRE+D    LRRLVFR+PQ YAP V  F   V+P      P+VIH L    FVVTVTE LP+++LFDQ    SP SS+   F+L +FC+TI+  + K + AF AA    A           L                          + V TLR+V+EQS + EMI NTM+LVQ
Sbjct:    1 MPTRRINVFARVDGTVLHDVLHRTPT-APTEQSSPKPSQVSAQTIWPIVHNFFALSRELDRAASLRRLVFRDPQQYAPPVSNFHTAVRPNRNHTPPIVIHCLQRAPFVVTVTETLPNFTLFDQQHHHSPLSSSSTEFTLSDFCDTIMHFVHKEYDAFSAANRAEAHADAQ------LXXXXXXXXXXXXXXXXXXXXXXXXADQAVQTLRQVIEQSKLTEMIHNTMQLVQ 223
The following BLAST results are available for this feature:
BLAST of Ggra9053.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRW31.850e-4343.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:48820..49521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9053.t1Ggra9053.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 48820..49521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9053.t1 ID=Ggra9053.t1|Name=Ggra9053.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=234bp
MPSRRVNVFARSDGSCLHDVIWQPQSDRPRPAAHHPPTQITADKIWPIIH
NFMSLSREVDGGPLRRLVFRNPQDYAPTVRKFDPVVQPAEKSIAPVVIHV
LSDTRFVVTVTEQLPDYSLFDQSPYSSAFSLGEFCETILDLLRKAHAAFV
AAQSTVAEPGRDDAPSSPLAQPSATSHDSAVRSANSKEASSKQVQEDVDT
LRKVVEQSTIAEMIDNTMKLVQFAQSTRTERVT*
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