Ggra9049.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9049.t1
Unique NameGgra9049.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length228
Homology
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IRX9 (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX9_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 6.710e-98
Identity = 143/207 (69.08%), Postives = 160/207 (77.29%), Query Frame = 0
Query:   21 SETMPSCK-RAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRV 226
            +  M +C  +A Y + F NFLTP +FG +IP  GLV+SP+ GASHSNR+S+LTVR  ASPQVEQIAETG N R V LAEHLRD E+GVKTV  A GPTMPGN TTLRF VDC HPFIT VGMIAPSPDWLV + N+NL   GRFI       IAYDAGTDDG +FT PTDASLDMPSEP KNIAPLVED+TDPF GR +G Y I+RV
Sbjct:   29 TRRMRTCSGQAEYVVNFTNFLTPRRFGRRIPKTGLVYSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAEHLRDTEQGVKTVAGADGPTMPGNSTTLRFTVDCEHPFITVVGMIAPSPDWLVQVGNVNLVRRGRFISFRXXXXIAYDAGTDDGAEFTSPTDASLDMPSEPQKNIAPLVEDDTDPFNGRFIGVYTIRRV 235          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IUA8 (Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA8_9FLOR)

HSP 1 Score: 280 bits (715), Expect = 1.370e-92
Identity = 140/220 (63.64%), Postives = 169/220 (76.82%), Query Frame = 0
Query:    9 LLTFAILQAVIASETMPSCK-RAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            LL+ A+ QAV A      C+ +A YK+TFRN LTPA FG  IP++GLVFSP+ GASHSNRIS LT+RGFASPQVEQIAETG N R V LA++LR   +GV++V +A GPTMPG  TTL + VDC HPFIT +GMIAPSPDW+V I N N+  +G+FI    G +IAYDAGTDDG +FT P DASLDMP+EP KNIAPLVEDETD F GR VG + I++++
Sbjct:    9 LLSLALFQAVAAERR---CRGKAIYKVTFRNLLTPANFGKLIPDNGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVALAKNLRRQRRGVRSVASAKGPTMPGKSTTLFYTVDCAHPFITMLGMIAPSPDWIVQINNRNMVRDGKFITRDSGTMIAYDAGTDDGREFTSPVDASLDMPTEPQKNIAPLVEDETDRFQGRIVGRFLIQKIK 225          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IS06 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS06_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 3.710e-90
Identity = 139/227 (61.23%), Postives = 166/227 (73.13%), Query Frame = 0
Query:    1 MLSKGIIVLLTFAILQAVIASETMPSCKRAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            M+ K I  +L  A+ + V+A        RA Y++TFRN LTP  FG  IP  GLVFSP+ GASHSNRIS  T+RGFASPQVEQIAETG N R V+LA +L+ + +GV +V AA+GPTMPGN TTL F VDC HPFIT +GMIAPSPDW+V + N  L  +G FI    G LIAYD GTDDG +FT P DASLDMP+EP +NIAPLVEDETD F GR VG ++I+RV+
Sbjct:    1 MIRKLIAFVLALAVFEVVLAEGHCTG--RALYRVTFRNLLTPENFGDLIPETGLVFSPLAGASHSNRISFFTIRGFASPQVEQIAETGQNGRFVRLARNLKYSRRGVLSVSAANGPTMPGNTTTLYFFVDCAHPFITMLGMIAPSPDWIVQLNNRPLIRDGEFISGENGTLIAYDTGTDDGREFTSPVDASLDMPTEPQQNIAPLVEDETDRFEGRIVGMFYIQRVK 225          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IT76 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT76_9FLOR)

HSP 1 Score: 267 bits (683), Expect = 1.000e-87
Identity = 137/227 (60.35%), Postives = 164/227 (72.25%), Query Frame = 0
Query:    1 MLSKGIIVLLTFAILQAVIASETMPSCKRAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            M+ +  + LL+ A+LQAV A        +A Y+++F+N LTP  FG  IP +GLVFSP+ GASHSNRIS LT+RGFASPQVEQIAETG N R V LA +LR   +GV  V AA GPTMPGN T L + VDC HPFIT +GMIAPSPDW+V I N N+  +G+FI    G LIAYD GTD G +FT P DASLDMP+EP  NIAPLVEDETD F GR VG + I+R++
Sbjct:    1 MIRQVTVFLLSLALLQAVSADGHCSG--KAIYRVSFQNLLTPKNFGNLIPENGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVTLARNLRRQGRGVLHVAAAKGPTMPGNFTNLFYAVDCAHPFITMLGMIAPSPDWIVQINNRNMIRDGKFITRESGTLIAYDVGTDSGREFTSPVDASLDMPTEPQMNIAPLVEDETDRFQGRVVGRFHIQRIK 225          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IT49 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT49_9FLOR)

HSP 1 Score: 263 bits (672), Expect = 4.700e-86
Identity = 129/199 (64.82%), Postives = 151/199 (75.88%), Query Frame = 0
Query:   29 RAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            RA Y+++F N LTP  FG  IP  GLVFSP+ GASHS+RIS LTVRGFAS QVEQIAETGDN R V +A +LR    GV  V AA+GPT+PG  TTL + VDC HPFIT +GMIAPSPDW+V I N N+  +G+F+   FG LIAYDAGTDDG +FT P DAS+D PSEP KNIAPLVEDETD F GR VG + I+R++
Sbjct:   27 RAVYRVSFHNLLTPENFGKLIPQRGLVFSPLVGASHSHRISFLTVRGFASRQVEQIAETGDNSRFVTMARNLRSQRHGVLHVAAANGPTLPGKYTTLFYPVDCAHPFITMLGMIAPSPDWIVQINNRNMLRDGKFVARDFGTLIAYDAGTDDGREFTIPADASVDKPSEPQKNIAPLVEDETDRFQGRIVGRFLIQRIR 225          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IRW7 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW7_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 2.390e-83
Identity = 132/228 (57.89%), Postives = 163/228 (71.49%), Query Frame = 0
Query:    1 MLSKGIIVLLTFAILQAVIASETMPSCK-RAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            M+ K + V LT A+ +A + S     C  +A Y+++F N LTP  FG  IP+ GLVFSP+ GASHSNR S  T+RGFASPQVEQIAETG N R V  A +L    K V++V +A GPTMPG  T+L F VDC  PFIT +GM+APSPDW+V I N N++ +G FI S  G LIAYD GTDDG +FT P DASLD+P+EP KNIAPLVEDETD F GR +GT+ I++V+
Sbjct:    1 MIRKVLAVFLTLALFEAAVGS----GCSGQAVYQVSFTNLLTPENFGELIPSTGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVAQATNLVPTGK-VRSVASADGPTMPGTTTSLLFTVDCARPFITMLGMVAPSPDWIVQINNRNMFRDGMFISSENGTLIAYDTGTDDGREFTSPVDASLDIPTEPQKNIAPLVEDETDRFEGRIIGTFDIRKVE 223          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IRX0 (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX0_9FLOR)

HSP 1 Score: 249 bits (637), Expect = 9.110e-81
Identity = 132/219 (60.27%), Postives = 155/219 (70.78%), Query Frame = 0
Query:   10 LTFAILQAVIASETMPSCK-RAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            L+ A+ QAV  S    +C  RA Y++TF N LT   FG  IP +GLVFSP+ GASHSNR S  T+RGFASPQVEQIAETG N R V  A++++   K V TV AA GP++PG  T+L F VDC  PFIT +GMIAPSPDW+V I N N++ NG FIP   G LIAYD GTDDG +FT P DASLDMP+EP  NI PLVEDETD F GR VG + I R+Q
Sbjct:   10 LSLALFQAVAES----ACSGRAVYRVTFTNLLTAENFGDLIPPNGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVTQAKNMQRTGK-VFTVAAADGPSLPGTDTSLFFAVDCARPFITMLGMIAPSPDWIVQINNRNMFRNGMFIPRENGTLIAYDTGTDDGREFTPPGDASLDMPTEPQMNIVPLVEDETDRFEGRIVGRFNIMRIQ 223          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IF45 (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF45_9FLOR)

HSP 1 Score: 239 bits (610), Expect = 1.180e-76
Identity = 126/221 (57.01%), Postives = 148/221 (66.97%), Query Frame = 0
Query:    7 IVLLTFAILQAVIASETMPSCKRAAYKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYE-NGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRV 226
            I+L     + A+I          A Y++ F N LTP  FG+KIP  GL FSP+   SHSNR S LTVRGFASPQVEQIAETG N R + LAE+L+ AE+GV+ V    G   PG   T+   V+C +PFIT + MIAPSPDW+V + NMN  + NG F     G+LIAYDAGTDDGGDFT  +DAS DMPSEP KNIAPL EDETDPF GR VGTY   R+
Sbjct:    4 IILFPILAIYALIGQSQAMCSGEAVYQVIFNNMLTPQTFGSKIPETGLNFSPLAAVSHSNRQSFLTVRGFASPQVEQIAETGMNGRFLALAENLKGAEQGVRDVAGGMGAG-PGMNQTVELTVNCENPFITALSMIAPSPDWIVQVNNMNTLDMNGEFRQRLGGNLIAYDAGTDDGGDFTAASDASFDMPSEPQKNIAPLFEDETDPFDGRMVGTYVFVRI 223          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2V3IFK3 (Spondin domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK3_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 9.430e-45
Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 0
Query:   96 LAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETDPFCGRPVGTYFIKRVQ 227
            +A +LR    GV  V AA+GPT+PG  TTL + VDC+HPFI  +GMIAPSP+W+V   N N+  + +F+   FG LIA DAGTDDG +FT P DAS D PSEP KNIAPLVEDE D F  R VG + I+R++
Sbjct:    1 MARNLRSQRHGVLHVAAANGPTLPGKYTTLSYPVDCSHPFIMMLGMIAPSPNWIVQTNNRNMLRDVKFVAGDFGTLIASDAGTDDGQEFTIPADASFDKPSEPQKNIAPLVEDEADRFERRIVGKFLIQRIR 132          
BLAST of Ggra9049.t1 vs. uniprot
Match: A0A2I0F3Y0 (Spondin domain-containing protein n=1 Tax=Moritella sp. Urea-trap-13 TaxID=2058327 RepID=A0A2I0F3Y0_9GAMM)

HSP 1 Score: 100 bits (249), Expect = 2.690e-22
Identity = 60/181 (33.15%), Postives = 91/181 (50.28%), Query Frame = 0
Query:   32 YKITFRNFLTPAKFGTKIPNDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLV-KLAEHLRDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLVLIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPKNIAPLVEDETD 211
            Y++TF +    A F T  P     FS + G +H+N++ I      A+P +  +AETG    L+ ++  H+  A       +  SG     +  +L F  + NHP+++ V M+APSPDW + I + NLYENG++  +A  +L  YDAG+D    FT     + D P  P   I  L  D  D
Sbjct:   37 YELTFTSNWNGANFPTNYPASAH-FSGLIGLTHNNQVDIFKRSELATPGIITVAETGGKSVLIDEINVHI--ATTNSDKAIDGSGIPAGSSTVSLTFSANTNHPYLSIVSMVAPSPDWFIGIDSFNLYENGQWQDNATFNLNVYDAGSDSADTFT-----AADSPQMPKSVITLLTTDSAD 209          
The following BLAST results are available for this feature:
BLAST of Ggra9049.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX96.710e-9869.08Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IUA81.370e-9263.64Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IS063.710e-9061.23Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT761.000e-8760.35Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT494.700e-8664.82Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRW72.390e-8357.89Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX09.110e-8160.27Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IF451.180e-7657.01Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IFK39.430e-4556.82Spondin domain-containing protein n=2 Tax=Gracilar... [more]
A0A2I0F3Y02.690e-2233.15Spondin domain-containing protein n=1 Tax=Moritell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 30..203
e-value: 8.6E-30
score: 104.3
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 20..212
score: 27.872086
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 18..213
e-value: 3.6E-41
score: 143.1
NoneNo IPR availablePANTHERPTHR11311:SF16SPONDIN-1coord: 26..205
NoneNo IPR availablePANTHERPTHR11311SPONDINcoord: 26..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:41105..41788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9049.t1Ggra9049.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 41105..41788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9049.t1 ID=Ggra9049.t1|Name=Ggra9049.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=228bp
MLSKGIIVLLTFAILQAVIASETMPSCKRAAYKITFRNFLTPAKFGTKIP
NDGLVFSPMTGASHSNRISILTVRGFASPQVEQIAETGDNRRLVKLAEHL
RDAEKGVKTVVAASGPTMPGNRTTLRFMVDCNHPFITFVGMIAPSPDWLV
LIANMNLYENGRFIPSAFGHLIAYDAGTDDGGDFTDPTDASLDMPSEPPK
NIAPLVEDETDPFCGRPVGTYFIKRVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf