Ggra9021.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9021.t1
Unique NameGgra9021.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length265
Homology
BLAST of Ggra9021.t1 vs. uniprot
Match: A0A2V3IK55 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK55_9FLOR)

HSP 1 Score: 131 bits (330), Expect = 1.130e-34
Identity = 58/123 (47.15%), Postives = 94/123 (76.42%), Query Frame = 0
Query:  137 GDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQW 259
            G + W++  LFKD+Y+ SQ+S KL+ARR+GPF+I++L+G+NA++L+LP H++IHP++HVSHT PH++Q  +IA   +  P P+  T E   ++V  ILKH++RG+ +Q+L LME +  H+++W
Sbjct:   11 GGKVWLNRSLFKDAYAKSQESDKLNARRFGPFQIVKLIGKNALKLELPDHIKIHPIVHVSHTIPHKKQTTDIAASVQPRPEPIQ-TEEGEEYEVAAILKHKKRGKEFQFLTLMEGAPNHDSEW 132          
BLAST of Ggra9021.t1 vs. uniprot
Match: uncharacterized protein LOC123543591 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD633 (uncharacterized protein LOC123543591 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD633)

HSP 1 Score: 112 bits (281), Expect = 1.560e-27
Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:  165 YGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQWQPTRD 264
            +GPF ILE++G+NA++L+LP H+RIHPV+HV HT PH  QP +I+      P PV  TA  P ++V+ IL HR RGRGYQ+L LM+    H+A+WQP RD
Sbjct:   17 FGPFGILEVIGKNALKLELPDHLRIHPVVHVMHTTPHYAQPADISSPVPVRPDPVP-TALGPEYEVEAILAHRRRGRGYQFLTLMKGDPIHDAEWQPARD 115          
BLAST of Ggra9021.t1 vs. uniprot
Match: A0A3B3HEV6 (Uncharacterized protein n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3HEV6_ORYLA)

HSP 1 Score: 81.3 bits (199), Expect = 4.410e-14
Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 0
Query:  121 RLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLP-VDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQWQP 261
            R+ D R ++   C+ PG + W+S +    +      S KLS R  GPF++L ++  +AV+L+LPA M++HPV HVSH KP        A V  S P P        P + V R+L  R RGRG+Q+L         E  W P
Sbjct:  197 RVADARRSSA-PCYSPGQKVWLSSK----NIQLRTDSRKLSPRYLGPFEVLAVINPSAVKLRLPASMKVHPVFHVSHLKPVCSS----ALVPPSKPPPPARLVGGRPAYSVRRLLDVRRRGRGFQYLVDWVGYGREERAWVP 329          
BLAST of Ggra9021.t1 vs. uniprot
Match: uncharacterized protein LOC114552216 n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106ED2DA (uncharacterized protein LOC114552216 n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106ED2DA)

HSP 1 Score: 80.9 bits (198), Expect = 5.130e-14
Identity = 52/146 (35.62%), Postives = 70/146 (47.95%), Query Frame = 0
Query:  116 AKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQWQP 261
            A S  + Q  R+ +    + PG   W+  R          +S K+  R  GPFK++ +V   AV+LQLPA +R+HP  HVS  KP    P  +    RS PLP       P++ V R+L  R RGRG Q+L   E     E  W P
Sbjct:   84 ASSYMQRQANRHRSQAPVYSPGQEVWLKSR----DLPLKVESKKMKPRFIGPFKVVSIVNPCAVKLQLPASLRVHPTFHVSQIKPGSVSP--LCPPSRS-PLPPRVVGGGPVYSVRRLLDVRRRGRGLQYLVDWEGYGPEERSWIP 222          
BLAST of Ggra9021.t1 vs. uniprot
Match: F2UB97 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UB97_SALR5)

HSP 1 Score: 79.7 bits (195), Expect = 3.220e-13
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 0
Query:  112 LATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQW----QPTRD 264
            LA +   ++R  D R +   K + PGD+ W++  LF D  +  +   KL  R  GPF ++++  R  VRL+ P+H+R HPV++V+ TKP    P +        P P+    E   ++V+RIL  R R    Q+L        +++ W    Q TRD
Sbjct:  648 LAQAQDKQKRYADQRRSDDIK-YSPGDQAWVTADLFVDQANQRRPKDKLKPRWQGPFTVIDMPSRTTVRLRFPSHVRAHPVVNVTKTKPCVNSPSDFNTRPNDEPPPLP-DGESDEYEVERILDERVRRGKRQYLIKWAGYDINDSTWINEDQLTRD 802          
BLAST of Ggra9021.t1 vs. uniprot
Match: F2U1B5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1B5_SALR5)

HSP 1 Score: 79.7 bits (195), Expect = 3.270e-13
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 0
Query:  112 LATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQW----QPTRD 264
            LA +   ++R  D R +   K + PGD+ W++  LF D  +  +   KL  R  GPF ++++  R  VRL+ P+H+R HPV++V+ TKP    P +        P P+    E   ++V+RIL  R R    Q+L        +++ W    Q TRD
Sbjct:  700 LAQAQDKQKRYADQRRSDDIK-YSPGDQAWVTADLFVDQANQRRPKDKLKPRWQGPFTVIDMPSRTTVRLRFPSHVRAHPVVNVTKTKPCVNSPSDFNTRPNDEPPPLP-DGESDEYEVERILDERVRRGKRQYLIKWAGYDINDSTWINEDQLTRD 854          
BLAST of Ggra9021.t1 vs. uniprot
Match: F2TY75 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TY75_SALR5)

HSP 1 Score: 79.7 bits (195), Expect = 3.530e-13
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 0
Query:  112 LATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQW----QPTRD 264
            LA +   ++R  D R +   K + PGD+ W++  LF D  +  +   KL  R  GPF ++++  R  VRL+ P+H+R HPV++V+ TKP    P +        P P+    E   ++V+RIL  R R    Q+L        +++ W    Q TRD
Sbjct: 1089 LAQAQDKQKRYADQRRSDDIK-YSPGDQAWVTADLFVDQANQRRPKDKLKPRWQGPFTVIDMPSRTTVRLRFPSHVRAHPVVNVTKTKPCVNSPSDFNTRPNDEPPPLP-DGESDEYEVERILDERVRRGKRQYLIKWAGYDINDSTWINEDQLTRD 1243          
BLAST of Ggra9021.t1 vs. uniprot
Match: A0A674P365 (Ribonuclease H n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674P365_TAKRU)

HSP 1 Score: 79.3 bits (194), Expect = 4.440e-13
Identity = 56/158 (35.44%), Postives = 77/158 (48.73%), Query Frame = 0
Query:  106 EIGNTQLATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQWQPTR 263
            ++ +T L TS +S+  LQ  R+      ++PG + W+S +          +S KL+ R  GPF++  +V   AVRL+LPA +RIHP  HVS  KP  E            P  VD     P +   RIL  R RGRG+Q+L   E     E  W P R
Sbjct:  714 QVRSTLLRTSRRSQ--LQANRHRTPAPSYQPGQKVWLSTK----DLPLQVESRKLAPRFVGPFEVDRMVNPAAVRLKLPAALRIHPTFHVSKVKPVAESDLVPPSDPXXXPRIVDGG---PAYTAQRILDVRRRGRGFQFLVDWEGYGPEERSWVPRR 862          
BLAST of Ggra9021.t1 vs. uniprot
Match: A0A1A8KCC3 (Chromo domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8KCC3_NOTKU)

HSP 1 Score: 75.5 bits (184), Expect = 6.170e-13
Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 0
Query:  112 LATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPL------FKVDRILKHRERGRGYQWLALMENSSTHEAQWQP 261
            L  +A+  +RL D R+      + PG R W+S R  +          KLS    GP+ I  +V  ++VRL LP+HM+IHPV HVS  KP          +  S+  PVD    V L      ++V R+L  R RGRG+Q+L   E       QW P
Sbjct:   28 LQRTAERNRRLAD-RHRRPAPDYAPGQRVWLSTRDIR----LKDHCKKLSPTFIGPYTISAVVNPSSVRLDLPSHMKIHPVFHVSLLKP---------VISSSLCPPVDPPPPVRLADGDLGYRVQRLLDVRPRGRGFQYLVEWEGYGPEHRQWVP 169          
BLAST of Ggra9021.t1 vs. uniprot
Match: F2UDX5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UDX5_SALR5)

HSP 1 Score: 78.2 bits (191), Expect = 1.110e-12
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 0
Query:  112 LATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDSYSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKPHREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALMENSSTHEAQW----QPTRD 264
            LA +   ++R  D R +   K + PGD+ W++  LF D  +  +   KL  R  GPF ++ +  R  VRL+ P+H+R HPV++V+ TKP    P +        P P+    E   ++V+RIL  R R    Q+L        +++ W    Q TRD
Sbjct:  782 LAQAQDKQKRYADQRRSDDIK-YSPGDQAWVTADLFVDQANQRRPKDKLKPRWQGPFTVIGMPSRTTVRLRFPSHVRAHPVVNVTKTKPCVNNPSDFNARPNDEPPPLP-DGESDEYEVERILDERVRRGKRQYLIKWAGYDINDSTWINEDQLTRD 936          
The following BLAST results are available for this feature:
BLAST of Ggra9021.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK551.130e-3447.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
uncharacterized protein LOC123543591 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD6331.560e-2754.00uncharacterized protein LOC123543591 n=1 Tax=Merce... [more]
A0A3B3HEV64.410e-1436.62Uncharacterized protein n=1 Tax=Oryzias latipes Ta... [more]
uncharacterized protein LOC114552216 n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106ED2DA5.130e-1435.62uncharacterized protein LOC114552216 n=1 Tax=Perca... [more]
F2UB973.220e-1331.85Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
F2U1B53.270e-1331.85Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
F2TY753.530e-1331.85Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A674P3654.440e-1335.44Ribonuclease H n=1 Tax=Takifugu rubripes TaxID=310... [more]
A0A1A8KCC36.170e-1335.26Chromo domain-containing protein (Fragment) n=1 Ta... [more]
F2UDX51.110e-1231.85Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045358Ty3 transposon capsid-like proteinPFAMPF19259Ty3_capsidcoord: 13..86
e-value: 3.0E-7
score: 30.0
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 187..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1182432..1186462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9021.t1Ggra9021.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1182432..1186462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9021.t1 ID=Ggra9021.t1|Name=Ggra9021.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=265bp
MNVVLEMLSVSCKQNGSVASYISSFRNIVLTIPDMSSSEKWDKFVSGLKP
KIQFEVRKANCQEFEEATKIAMRVEEAFSGVSMPSSSSTASNETAERAGS
TIVPMEIGNTQLATSAKSKQRLQDIRNNACFKCHKPGDRGWISHRLFKDS
YSNSQQSSKLSARRYGPFKILELVGRNAVRLQLPAHMRIHPVIHVSHTKP
HREQPREIAQVGRSVPLPVDATAEVPLFKVDRILKHRERGRGYQWLALME
NSSTHEAQWQPTRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045358Ty3_capsid
IPR016197Chromo-like_dom_sf