Ggra9014.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9014.t1
Unique NameGgra9014.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length294
Homology
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BLAST of Ggra9014.t1 vs. uniprot
Match: A0A2V3INI4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI4_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 3.290e-42
Identity = 84/207 (40.58%), Postives = 115/207 (55.56%), Query Frame = 0 
Query:   10 LLLFSLALADDEEFVSRRN---VERGIYIPRIPFSTRNFRTESCLLLNGRNVISEPFSFDFEAADTLFACSEKNGPLVTHFPGKLSLSRSEFVCEKTPLITYNDEETSVDFPPFRLPFVCVEDICVFYKSLGKRVLLSAAILPEEAPILKEKRDIKVPFLATQVLFDFDNRMVKSFAKNQAHAFNKGVTGSIDLRAMSYLGIKKAQC 213
            L+LF L          RR+   V RG++ PRIP  T   + E C +++ +NVI E F   FE+   L  C+     L+THF G  SL    FVC++ P+I+Y+       FP      VC +++CVF  + G +V LSAAI PEEA IL  K  I +PFL T+V + F+ ++ + FA     AF K VTGSIDLRAM +LG +   C
Sbjct:    7 LILFLLVTTSAARGRRRRSFPPVLRGVHYPRIPIDTIYTQQERCAIVDAKNVIKEEFPNSFESYSILTTCASNRNGLITHFAGNFSLESFSFVCDEEPVISYDKNAEPPSFPVTGKDVVCGDELCVFVFATGNQVFLSAAISPEEARILPSKPAISIPFLPTKVFYRFNGKL-RQFAGRMVKAFEKDVTGSIDLRAMVFLGARSGSC 212
The following BLAST results are available for this feature:
BLAST of Ggra9014.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INI43.290e-4240.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1152567..1153777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9014.t1Ggra9014.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1152567..1153777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9014.t1 ID=Ggra9014.t1|Name=Ggra9014.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MKTLFATSLLLLFSLALADDEEFVSRRNVERGIYIPRIPFSTRNFRTESC
LLLNGRNVISEPFSFDFEAADTLFACSEKNGPLVTHFPGKLSLSRSEFVC
EKTPLITYNDEETSVDFPPFRLPFVCVEDICVFYKSLGKRVLLSAAILPE
EAPILKEKRDIKVPFLATQVLFDFDNRMVKSFAKNQAHAFNKGVTGSIDL
RAMSYLGIKKAQCRSVLTMIIVDRDKWEPAYFSKLCVTKINLVHPLDFPS
CPLSTSQECRYCVLGQNKMSEQNGKRSEGKDRSAALIVDGSDE*
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