Ggra9001.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9001.t1
Unique NameGgra9001.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1272
Homology
BLAST of Ggra9001.t1 vs. uniprot
Match: A0A2V3ID63 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID63_9FLOR)

HSP 1 Score: 570 bits (1470), Expect = 4.780e-179
Identity = 396/1154 (34.32%), Postives = 597/1154 (51.73%), Query Frame = 0
Query:  235 FAIRPVKKNALKASFLFQKQLELQSNVLRARHRCRMSINDITRNASDSLSNSIPIGKTHRNLRRSPEERKIDWRAAMSQVCVEEVGHNPDLQRVSSPVLPSILLNSEVNQRLDISGVPVQPISLPHQHITIASVWTNMVFELEMLIALLEKSTQDDRCDFKHSHNVTNIMEAAYPQGHSKESLITISSLLKSSRSWDILSVPRRSPLRATLGRSACNSSD--IFETCFKGYSFSNACSRTK--STFKEKSCDWNNEEEVI--FSSLRSLRKPFTSLSGLRTEIMMKQQTSNPWSVEVIRLPEFERDEAFAKSSTCSRLQLCSKVILPGDLLQTKCFSVPTALRTAL---QPKSLRTYEKTSYLSDLLRSIHQSSRIRGFDGLWSSGSREVMRKCHLKETILSSGFDRRGALLQMTQARDTL--LVSKHIIGGDIIL-LEKAVDTLRRAFSKRSRSLLPFSIDLCEDLRFSFRQKGNHRIQPILSFEK-LLDQYYDYDALEKNQSRTLTEHIPKCGIAGKTDPSLSALVESEYPNSKEERNGDNTSQESDLDNILTSDDEDQ-----------EPEPDAEPAMV------VAQQMPMFKHRKHIGNREE-----------------------TTNPQSSLLRTK----------------SDQQEPQRF------------------------------LSRTHFC-----------TQNILILNSFDFSLPTGVSLLIILVCEPRLICSRP--QSSFGHQLSSINPEWPYLSSILIAPIDCWVPLPAYIDTAQRLSLELKTHAVLFVADYDDVHTSVLLAKPRALFLVPLKQASDLISVIDSHSCAALGSLHELFSKAKPGCPNPGAQS-----LSDFSVSYLRNILENYHFERNSDTYQSLETVYYLRQARSYALYDGFDVAMAFLSYCRHELRPESSELLQKVMKAFDTIEAQTATADADHPVVIPVAAHMKRMHEDFNKDPPSMSLTHRRTTFLPLIIADSREAVDGFQRGRTKAKLLFEARDRDIAICWLSDLVSISFKKSTSVQGKRVLDRLKEFSHIYHIIDGRENTHSESKFPPCILQLVHAGRTRLITVVVDERREMESIWTNSFKMYDTMRKYIGDQSRFSGMGGVQTLREMKWETVTHMLRSLW 1271
            F++RPVK+NA K SFL  K  E  S   +++H+CRM I DI +     L    P    H  LRR PE+RK DWR AM+ +  EE          + PVL S +      Q LD+  +P  PIS P   + +ASVWTN+VF+ E+L  LL       +  F+ S     + ++ +    +K S+      L  S S+++       P+  ++       S   + E   K  +  + C R    S   E       +E+++  F S+R+    F  L  L T+++ +Q T+      ++  P+  R +A + + +       S ++     LQTK  ++    RTA+   +PK +   E  S    LL ++H    +     LWS+GS EVMRKC +++T  S+  ++R  +L+  + R+    L + +  GG  +L L++  D L R++S ++ + LP  +++CE  R   R++   + +P+LS EK ++++   +D +++N    L+  I K G       S      +    ++ + + ++TSQES LDNIL S+ ED            +PE       V      +A+++P+   +     ++                           P+ ++L                   ++Q + QR                               +SR  F            T  + IL+SFDFSLP+ VSLL+IL+C+P L  S+   +S +G  L  INP+W +LSSILIAP+D WV    Y+  A+++SLEL   AVLF+ +YD VH SVLLAKPR LFLVPL  AS+L+SVID+HS   L  L    + A+  C +    S     L D SV  LR+ LE+ +    + T   LET Y+LRQARSYALYDGFDVA AFL++C  E+  + +  L++VMK  + I A+  TA+ DHP++ PV  H+++    F  + PS+   HRR  F PLIIA+S E VDGF+RG  KAKL+ EA +RD+A+CW++DL S+  K+  +  GK+VL+R++ FSHIYHII  R+ +H + + P  ILQLVHAGRTRLITV VDERR+ME  WT +   Y  M+KY+GDQ   +GMG    L  +KW+TV +M+ SLW
Sbjct:   61 FSLRPVKENAFKPSFLLLKPQEHSSRKHQSKHKCRMLITDIMQRTCRFLLGRTPRSAIHSKLRRPPEQRKNDWRGAMANIAFEEKLDRTTTPSHTFPVLQSSVNEVHAQQTLDMDQIPSMPISFPSPSLELASVWTNLVFDCEVLQHLLHHIDSTAKFGFEESIQRDQVWQSQF---ETKASVFEDFFDLSPSASFNL------HPVETSILSEFPKWSQRLLSEETGKNVTIGHLCQRDHVFSILTESQSLDRFDEDIMQAFDSIRAGSSHFLDLQHL-TQVLGEQDTALKLRC-MLCTPDIVRHDAHSVTRSWFMYSYFSPIM--ERELQTKIKTILHTSRTAVMFARPKRVTDDETPSKFLKLLSTLHNKRNLIAEKCLWSTGSLEVMRKCRVQDTRRSNISNQRSYILREAKHRELFPSLENSYTGGGATMLGLDRHADELLRSYSSKTEAFLPLKVNVCEISRKDMRREIGMQAKPLLSHEKEIIEKLNTFDIIKRNPCVWLSAKILKIGAKPADAVSAQDCDTNGRSRAEHQTDSESTSQESLLDNILPSEGEDAVEDLIVPDLCGKPESCTGTRKVNISQESIAKKLPLISRKNSKSQKDNLRLRVPESFVCSMWSVRAAEYCVVQMPRGTILLPPCLSALPTLCIVIYSHLANQLQDQRIAIICDAEADVSRGLHAYLENSFGRKVSIEIISRGSFSKEPRFASVNEYTAQVFILDSFDFSLPSRVSLLLILICQPHLFDSQTSFKSPYGQHL--INPDWRHLSSILIAPLDSWVLFSEYVKRAEQISLELDMSAVLFIPEYDLVHHSVLLAKPRTLFLVPLSDASELVSVIDTHSSPILTRLRNFLNNAQIACCSLSNNSMFVPQLRDISVFLLRHCLEDQNRNIEAKTRADLETAYFLRQARSYALYDGFDVASAFLAHCVSEMSSKKTATLREVMKKVEYITAERTTAERDHPIIRPVMDHIRKARIAFRTEAPSLFSLHRRHAFRPLIIANSTETVDGFRRGTMKAKLILEAGERDLAVCWVNDLASLREKQGVNGYGKKVLERMELFSHIYHIIGDRDTSHPDIQLPAQILQLVHAGRTRLITVAVDERRKMEPTWTANEGSYSVMKKYLGDQRILAGMGTGNALCGLKWDTVQYMMSSLW 1199          
BLAST of Ggra9001.t1 vs. uniprot
Match: R7QGP8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGP8_CHOCR)

HSP 1 Score: 172 bits (435), Expect = 8.770e-40
Identity = 114/402 (28.36%), Postives = 203/402 (50.50%), Query Frame = 0
Query:  841 TQNILILNSFDFSLPTGVSLLIILVCE-PRLICSRPQS--SFGHQLSSINPEWPYLSSILIAPIDCWVPLPAYIDTAQRLSLELKTHAVLFVADYDDVHTSVLLAKPRALFLVPLKQASDLISVIDSHSCAALGSLHELFSKAKPGCPNPGAQS-LSDFSVSYL-RNILENYHFERNSDTYQSLETVYYLRQARSYALYDGFDVAMAFLSYCRHELRPESSELLQKVMKAFDTIEAQTATADAD----HPVVIPVAAHMKRMHEDFNKDPPSMSLTHRRTTFLPLIIADSREAVDGFQRGRTKAKLLFEARDRDIAICWLSDLVSISFKKSTSVQGKRVLDRLKEFSHIYHIIDGRENTHSESKFPPCILQLVHAGRTRLITVVVDERREMESIWTNSFKMY 1233
            T  ++IL+SF+F++  G +LL++   E    +   PQS    G ++ S    W  + S+L+ P      + +Y     R +  L      F+ + DD+   +LL++   LFLVP +   + I+++++ + +   +  ++   A   C   G  S L D  ++ L +++ E    +R   +  +LE +Y LRQARSYALYDG++ A+A+L+   H  +  SS+ L  +      + A   ++D +    HPV   +      M  +      S+   HRR+ F  L+I +S+E+ DG  +    ++ + +A D +I +C L  L +    K    + +   +   +FSH+YH+++ R+    +   PP ++Q +HAGRT+LITV VDE R +ESI      +Y
Sbjct:  453 TARVVILDSFEFTVSPGFALLVVFAPEVSSTLFEGPQSLSRSGTKVLSAASIWKSIPSVLVLPSYFHDTVISYSQKVPRFANLLDLKDTYFILEKDDIEHLLLLSRRSFLFLVPPRDVLEFIALLETEASSFFPAYQKI--AAAEQCNTGGCISCLQDVDITVLEKHLREEVSHQRTETSGYTLEILYSLRQARSYALYDGYNAAVAYLN---HYSQAASSKTLAALQSILADVPAPGQSSDKNSSETHPVATALENSFLSMEGEMENQAASLRSIHRRSKFRVLVITNSKESYDGLIKSLKNSRYILKAADGEIGLCELRHLWNGVENKRGGYRNEEC-EASTKFSHVYHVVNDRKGRSRDHFLPPLLMQYIHAGRTKLITVAVDETRTLESIHDRDVTLY 848          
The following BLAST results are available for this feature:
BLAST of Ggra9001.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ID634.780e-17934.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGP88.770e-4028.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..827
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 773..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 746..827
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..1271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1097709..1103043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9001.t1Ggra9001.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1097709..1103043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9001.t1 ID=Ggra9001.t1|Name=Ggra9001.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1272bp
MKYVFVAVVLSILINLSAAGGSANRKWMATITFAANDAAILFIDGMPKAY
VKEWTAIKEYRFEVKKGTVIAFKATNRHNWYGFIANVRIGKKNYPTGTRY
WRATHGGVRTAKTSIGGAGDEDNRTSCQCELVDNINGMCYYFDDPSARSG
RCIFIEGKKFLLFQDPKAALSNSIDVRQFRESSSRPSPSIKETSMGDDFG
YPPRPLLFEINGVSNHLARKDDLDEMAKAAKTSPFAIRPVKKNALKASFL
FQKQLELQSNVLRARHRCRMSINDITRNASDSLSNSIPIGKTHRNLRRSP
EERKIDWRAAMSQVCVEEVGHNPDLQRVSSPVLPSILLNSEVNQRLDISG
VPVQPISLPHQHITIASVWTNMVFELEMLIALLEKSTQDDRCDFKHSHNV
TNIMEAAYPQGHSKESLITISSLLKSSRSWDILSVPRRSPLRATLGRSAC
NSSDIFETCFKGYSFSNACSRTKSTFKEKSCDWNNEEEVIFSSLRSLRKP
FTSLSGLRTEIMMKQQTSNPWSVEVIRLPEFERDEAFAKSSTCSRLQLCS
KVILPGDLLQTKCFSVPTALRTALQPKSLRTYEKTSYLSDLLRSIHQSSR
IRGFDGLWSSGSREVMRKCHLKETILSSGFDRRGALLQMTQARDTLLVSK
HIIGGDIILLEKAVDTLRRAFSKRSRSLLPFSIDLCEDLRFSFRQKGNHR
IQPILSFEKLLDQYYDYDALEKNQSRTLTEHIPKCGIAGKTDPSLSALVE
SEYPNSKEERNGDNTSQESDLDNILTSDDEDQEPEPDAEPAMVVAQQMPM
FKHRKHIGNREETTNPQSSLLRTKSDQQEPQRFLSRTHFCTQNILILNSF
DFSLPTGVSLLIILVCEPRLICSRPQSSFGHQLSSINPEWPYLSSILIAP
IDCWVPLPAYIDTAQRLSLELKTHAVLFVADYDDVHTSVLLAKPRALFLV
PLKQASDLISVIDSHSCAALGSLHELFSKAKPGCPNPGAQSLSDFSVSYL
RNILENYHFERNSDTYQSLETVYYLRQARSYALYDGFDVAMAFLSYCRHE
LRPESSELLQKVMKAFDTIEAQTATADADHPVVIPVAAHMKRMHEDFNKD
PPSMSLTHRRTTFLPLIIADSREAVDGFQRGRTKAKLLFEARDRDIAICW
LSDLVSISFKKSTSVQGKRVLDRLKEFSHIYHIIDGRENTHSESKFPPCI
LQLVHAGRTRLITVVVDERREMESIWTNSFKMYDTMRKYIGDQSRFSGMG
GVQTLREMKWETVTHMLRSLW*
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