Ggra8996.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8996.t1
Unique NameGgra8996.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length668
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8996.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 432..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..371
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..667
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1080643..1082646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8996.t1Ggra8996.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1080643..1082646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8996.t1 ID=Ggra8996.t1|Name=Ggra8996.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=668bp
MNINAVLFVALLAVLTILLSRLRHIFFASEQNHIPVLNTGSKRTTGRSPP
SPSCTVTASANPTAPVSRAPRHRPGRNICVQSVPGVGALAPHRTAPGSGS
HTPQALPNGPHAGHLATSRPRCRSPPPSPPHRNQRTSQPLPVPQRTARTP
ECPPSVASRKHSAPSTPELHASSASKKGLFNGLSRKRSGSKGLEPLKQQN
RLPAPLLTSKLAKRVGTSSVLAQDSQKSFAGEKGIVLASPKCKKSLSDIL
GSTHTSSKVRKPLAQVTRLPAPLHAKAKLAARAGRYPSSPESAQKGLKSL
ADATPGRLEKHETDGGNVENRGDTSRTQAKVIKVCSANSIAQPRKAGVET
ESHQKPQIEQTFHTVQKSVNLDGKRPSEKSCTAFEPPAKKPRRSHDSNSV
RDLKETSVVVGILQLDPGPVILRRSNLVSFHYRSLEEALENLRQKCELLE
HSSFVSERAGSLLAQCVYIGLIDPKVFFIPHPLRLCFQSACVLLAGYACD
EKREATEVCNAFSTNETKYTIKFLLHVKECLSIQGVTQHTLKQVQVMRTG
EYSRELLARYCRLSGEISEREQNIAEKVLRLVQNEFRHTSTLETTKVAAS
LNIVLSVTKKNIPSVETMIQDLTGIRASTIKSFTMEIRQLANRNNPDIIM
MEAQKEAIAIACETIDD*
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