Ggra8972.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8972.t1
Unique NameGgra8972.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length853
Homology
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BLAST of Ggra8972.t1 vs. uniprot
Match: A0A2V3IYB0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB0_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 3.840e-21
Identity = 54/130 (41.54%), Postives = 80/130 (61.54%), Query Frame = 0 
Query:  655 MISLRNVMVSNGDEKYEVVAQDIDPFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNIAMESYKQGSLPSLSVFKTFKVGENPNPQKELVRWENSSVPFIQAPNKANVKIFKRRKS 784
            M+ L+  M +   E+ E   +DID FL+  +E EV  CVK SD+QA+FDQI+RVT  +GPYA +HFQQVL  A+ +Y +  L S+  FK ++   NP      + W    +  ++ P KAN++I KR+K+
Sbjct:    1 MMRLKEKMGTEDVERGETY-EDIDQFLERPSEREVRICVKCSDSQALFDQIKRVTCSLGPYAEDHFQQVLLTAIHNYNEVRLLSIIRFKIYEHCNNPEKDFGGIEWATGRIHVVKPPEKANLRIVKRKKA 129
[Close]
BLAST of Ggra8972.t1 vs. uniprot
Match: A0A2V3IYY1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY1_9FLOR)

HSP 1 Score: 61.2 bits (147), Expect = 6.010e-7
Identity = 40/129 (31.01%), Postives = 64/129 (49.61%), Query Frame = 0 
Query:  674 AQDIDPFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNIAMESYKQGSLPSLSVFKTFKVGENPNP-QKELVRWEN----SSVPFIQAPNKANVKIFKRRKSYTERFRAKKAKVI 797
            A D+D  L    E EV   VKWSD   +F+Q+  +   +GP  V  F ++L        +  + + ++   F       P +K  V   +    +++  +  PN+AN K+ KR+KS+TER  AKK K+I
Sbjct:   12 ASDVDLVLHKTTENEVRKHVKWSDNHVIFNQVHTLVRFIGPAEVEDFMELLKELQRRLNRVKMVTKNMLDEFHTVMEQYPREKNRVTIRDVDGQTAMTSLLPPNRANSKLTKRKKSFTERLHAKKHKLI 140
The following BLAST results are available for this feature:
BLAST of Ggra8972.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYB03.840e-2141.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYY16.010e-731.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 571..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1011374..1015780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8972.t1Ggra8972.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1011374..1015780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8972.t1 ID=Ggra8972.t1|Name=Ggra8972.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=853bp
MASIFFETNDVTECMIMDYRRNERAHYFQERDVGRSRLKSLRNPLLRRSD
FSLPFEVRTLTPVSVINGYAAGDKVADLSVDDRKKIVQNNHSAGIDVPLA
ESARNTYGVYEGSATGAEQKEIGRNGSNADDSLHSSGALIETPIPHDAVQ
RPTSLKEVKKSREYIRSEVRRRVQYENAHLPPVCRRISRPKVRFLDSEKR
AERKAIVNQVLQDVLQDVLSCSLHGILPPDEEKDSRQYAGEAKDILDFIS
SISRRTGFFFTLHYFRYVRRPPKKNLRLLTARFRCVQHKEKCPAGIVVGL
PRISSRNWLVQVNFNHSHKASEAPEAFIQDHYGAVEARMIKQFHAFRGRV
TGKKQGFWDVLYSKSFPRHTMGSHLDGNPNKTIFNDGVVVEEGFHTLVSR
DGQPLPIQPRPVASRPILRPVSVVVRTPASSIMNDVVGPYGNGALGDDAD
RTSEAFGTDVGGVCCGENDVTEEIDVNDSSKNCFVQSGIPLITEETKTGQ
SQTIFGGDPVLEFSREERDTLVTALSHGEVGDVPTMTQYVQQRASEDGSE
LIEQFLFLDENEEVPNELIVIPKVEDEPDKNITPSSEGTDTGSTNEDDGE
GDTQELDVHDVFKAAVISYFRSLDVNAPGLDVSDSEQFDYLRVCDLRKEA
RVLDMISLRNVMVSNGDEKYEVVAQDIDPFLKTVAEEEVGTCVKWSDAQA
MFDQIRRVTSGMGPYAVNHFQQVLNIAMESYKQGSLPSLSVFKTFKVGEN
PNPQKELVRWENSSVPFIQAPNKANVKIFKRRKSYTERFRAKKAKVIGCG
EERYECSQDEHSQDRCGSQAQIQSSRGRSEHTRAAVDNALSLALSIVENR
DN*
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