Ggra8954.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8954.t1
Unique NameGgra8954.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length294
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8954.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..274
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
NoneNo IPR availableTMHMMTMhelixcoord: 251..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:965549..966430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8954.t1Ggra8954.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 965549..966430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8954.t1 ID=Ggra8954.t1|Name=Ggra8954.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MDNQGDTSLRPETNAEHTQESDEQSNEASENPQADVADTVAPSSTEREGS
VNSSDSSPLNVPQTETSEQASEQSVQTNARIATVIYDMLIRGSGDNTENE
TYYTELINNFPVSAVLAREYATHVAETIFQPMQYTIYAQEAMRRRRMILR
RISISSMSMLFGIGSALVASLWLWFVISLAIAATLARAVRSDAFTSAVHF
FASPILKTEGLTRLLYEWVFNFMNQENPIVAIRNHGSMAGMRTTFSPNLH
ITTVFLIPVVIGLVYGIIGGLLAITINMGLNTIGGIRYEAHDD*
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