Ggra8952.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8952.t1
Unique NameGgra8952.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length484
Homology
BLAST of Ggra8952.t1 vs. uniprot
Match: A0A2V3INN3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INN3_9FLOR)

HSP 1 Score: 511 bits (1316), Expect = 1.170e-175
Identity = 302/489 (61.76%), Postives = 370/489 (75.66%), Query Frame = 0
Query:    1 MAGGRRPSSYVSGARHGSAIDRQFVQEANAS------PPLTSTTGPSLPPWIPSIWQPAPMQSPTPRAVRDKHTTVDPSSVLAAALDTAVQSAVERALGAAPPATSTSQLTVSSSNSENSAEDESSQPLTQRENELLDLVAALKERLQQRDDDIASLQHRMSSLENSLQRHQTSTQTHHQRLESATTNLAKHMSATFSVSDARLEDRLTAIKDQIASTQKSVCRLPNHS----ADIAHLYSRSRQLTSELFNTRTHFITEFEKYASKMKQFEQSFKTISDRLSSVAADASASNPDVEQLRRSVESATESLATVRSKLKRVETQVGEVSKQAEDSVALSGAFEESIRAGLDDITKTVSSLHCTVREIKKNLPPNPDD---TDTSSKNGLTSKVDSLETNLKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYADNDDQFVLVREEDLEGNES-VGIHRSS 475
            MAGGRRPSSYVSG RH SA+DRQ VQ   A+      PPL+S+ GPSLPPWIPSIWQP P++SPT R  RDK  ++DPSS LAAALDTAVQSAV RALG+A   T  SQLT SS +SEN  EDE+SQPLTQRENELLDL+ ALK RL QRDDDIASL +RM +LE+ LQ+     Q  H+   +    L KH S +F+  D  +E RLT ++D + ST  SV +L N +    A+I  L  R+R+L+S++   RTH   EFE+ A ++ Q     +  ++RL+S+A+D S++ PDVE LRRSVE+A+E +ATVRSKLKRVETQV +V+++AE+S+ALSGAFE+S+  GL+ I  +VSSL  TV+EIK+ +P    D   T  +S + L +KVD+LETNLKALKRLIES+LRT+  AESIVKEQVSLITKHVCVAMRQYTARRISENNALID+ALRARIPEYA NDDQFVLVREEDLEGN+S VGIHRS+
Sbjct:    1 MAGGRRPSSYVSGVRHSSAVDRQTVQAVPATQDGFSTPPLSSSNGPSLPPWIPSIWQPPPLRSPTQRPSRDKPASLDPSSALAAALDTAVQSAVVRALGSA---TIASQLTSSSCDSENGLEDETSQPLTQRENELLDLIVALKSRLHQRDDDIASLNNRMEALEHKLQQQHNVAQVRHENFTTDKAALTKHFSDSFAELDKSVEVRLTTVRDHVRSTNASVSKLRNANSVAEANITALNRRTRELSSQVTQLRTHMKAEFERQAVRVNQLGDHVRASAERLNSLASDVSSA-PDVEHLRRSVEAASEDVATVRSKLKRVETQVSDVTRKAEESIALSGAFEQSVGEGLNQIRASVSSLAGTVKEIKETVPSMATDATITSQTSNHELVAKVDALETNLKALKRLIESSLRTRLHAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDRALRARIPEYAQNDDQFVLVREEDLEGNDSTVGIHRST 485          
BLAST of Ggra8952.t1 vs. uniprot
Match: R7QG72 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG72_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 3.840e-41
Identity = 76/99 (76.77%), Postives = 89/99 (89.90%), Query Frame = 0
Query:  377 SKVDSLETNLKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYADNDDQFVLVREEDLEGNESVGIHRSS 475
            S+++ +E N+ +LK+LIESNLRTQW+AESIVKEQVSLITKHVCVAMRQYT RRISENNALID+ LRAR+PEYA N+ QFVLVREED +GNES+ I RSS
Sbjct:   30 SRLERVECNVNSLKKLIESNLRTQWNAESIVKEQVSLITKHVCVAMRQYTTRRISENNALIDQTLRARVPEYAKNEGQFVLVREEDTDGNESIDIQRSS 128          
BLAST of Ggra8952.t1 vs. uniprot
Match: A0A7S0ZGL3 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGL3_9RHOD)

HSP 1 Score: 94.0 bits (232), Expect = 1.050e-16
Identity = 88/306 (28.76%), Postives = 137/306 (44.77%), Query Frame = 0
Query:  211 STQKSVCRLPNHSADIAHLYSRSRQLTSELFNTRTHFITEFEKY---ASKMKQFEQSFKTISDRLSSVAADASASNPDVEQ----------LRRSVESATESLATVRSKLKRVETQVGEVSKQAEDSVALSGAFEESIRAGLDDITKTVSSLHCTV-------REIKKNLPPNPDDTDTSSKNG------------------LTSKVDS----LETN-----------------LKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYADNDDQFVL 457
            S ++S  R PN    + +   R  +L  E    RT    + +K    AS+ +  E+   ++S +L SV    S S  +V Q          +  S++S+ +  A ++++++ +  +      Q E +V       E +++ L D+  T  ++   V       R+  +       + D S+ N                   LTSK DS    +E N                 +  LK+L+E NLR Q SAE  VK Q S+ITKHVC+AMR++TAR+I ENN  ID ALR R P+YA +D   VL
Sbjct:  330 SLERSGVRSPNSEKVLLYTQKRIERLEFENIQLRTALALQEDKTSKDASRFENLEKLVVSLSMKLESVEQKQSESKRNVAQTSELSECMNSMNCSIQSSEKKTALIQNEIEHLREEFESKIVQVESNVKSILEMTEELKSSLADVVLTPEAIVEPVVDSDVLHRKQHEKRDAGKVEADLSTLNRKVESMQSSLKQLNLKMKQLTSKYDSQIDEIEENSVIRDSAVEKMREQLEQMGRLKKLVEQNLRLQSSAEETVKNQASMITKHVCIAMREFTARKIMENNEFIDSALRQRCPDYAKSDSCCVL 635          
BLAST of Ggra8952.t1 vs. uniprot
Match: M2W850 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W850_GALSU)

HSP 1 Score: 61.2 bits (147), Expect = 1.600e-6
Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 0
Query:  378 KVDSLETNLKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYADN 451
            K+++L    +++K+ +E N+  +  AES+VKEQVSLITK VCV MR+ T+  + ENN  I   L+  I  Y ++
Sbjct:  284 KLENLAHTTESIKQFVERNIHIRSDAESLVKEQVSLITKQVCVEMRKITSNILKENNFRIGDMLKRNIEGYGND 357          
The following BLAST results are available for this feature:
BLAST of Ggra8952.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3INN31.170e-17561.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG723.840e-4176.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZGL31.050e-1628.76Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2W8501.600e-641.89Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..313
NoneNo IPR availableCOILSCoilCoilcoord: 134..168
NoneNo IPR availableCOILSCoilCoilcoord: 372..399
NoneNo IPR availableGENE3D1.10.287.1490coord: 196..367
e-value: 3.8E-7
score: 31.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..54
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 125..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:960846..962297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8952.t1Ggra8952.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 960846..962297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8952.t1 ID=Ggra8952.t1|Name=Ggra8952.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=484bp
MAGGRRPSSYVSGARHGSAIDRQFVQEANASPPLTSTTGPSLPPWIPSIW
QPAPMQSPTPRAVRDKHTTVDPSSVLAAALDTAVQSAVERALGAAPPATS
TSQLTVSSSNSENSAEDESSQPLTQRENELLDLVAALKERLQQRDDDIAS
LQHRMSSLENSLQRHQTSTQTHHQRLESATTNLAKHMSATFSVSDARLED
RLTAIKDQIASTQKSVCRLPNHSADIAHLYSRSRQLTSELFNTRTHFITE
FEKYASKMKQFEQSFKTISDRLSSVAADASASNPDVEQLRRSVESATESL
ATVRSKLKRVETQVGEVSKQAEDSVALSGAFEESIRAGLDDITKTVSSLH
CTVREIKKNLPPNPDDTDTSSKNGLTSKVDSLETNLKALKRLIESNLRTQ
WSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAD
NDDQFVLVREEDLEGNESVGIHRSSREPSSGDS*
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