Ggra8950.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8950.t1
Unique NameGgra8950.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length169
Homology
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A2V3INM7 (Ubiquitin-conjugating enzyme E2 7 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3INM7_9FLOR)

HSP 1 Score: 333 bits (855), Expect = 8.760e-116
Identity = 161/167 (96.41%), Postives = 164/167 (98.20%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQED 167
            MAS SQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDT Y+GGLFKAKLSFPP+YPYMPPTMRF SDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPE+FKKKVRETVRRAQED
Sbjct:    1 MASTSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTLYDGGLFKAKLSFPPDYPYMPPTMRFTSDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEVFKKKVRETVRRAQED 167          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A7S1XC24 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XC24_9RHOD)

HSP 1 Score: 280 bits (717), Expect = 1.140e-94
Identity = 132/164 (80.49%), Postives = 149/164 (90.85%), Query Frame = 0
Query:    5 SQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            +QA++LL+RQL++LNKN DSGFSAGLVD+SNPFEWQVILTGPPDT YEGGLFKA+++F  EYPYMPPTMRF+S+MWHPNIYKDGKVCISILH PG+DPN YE+ASERW PVHTVESILVSVISML+ PNDES ANLDAAKEWR    IFK+KVRETVR+  EDL
Sbjct:    9 NQASLLLVRQLRDLNKNPDSGFSAGLVDESNPFEWQVILTGPPDTCYEGGLFKARMTFGAEYPYMPPTMRFVSEMWHPNIYKDGKVCISILHPPGNDPNDYEDASERWSPVHTVESILVSVISMLASPNDESPANLDAAKEWRHERAIFKRKVRETVRKTSEDL 172          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A1X6PGW9 (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGW9_PORUM)

HSP 1 Score: 280 bits (716), Expect = 1.620e-94
Identity = 129/166 (77.71%), Postives = 153/166 (92.17%), Query Frame = 0
Query:    2 ASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQED 167
            ++  QA++LLMRQLK+LNKN DSGFSAGLVDD+NPFEWQVIL+GPP+T YEGGLFKA+LSFP +YP+MPPTM+F + MWHPN+YKDG+VCISILH PG+DP QYE ASERW PVHTVE+IL+SVISML+ PNDESAANLDAAKEWR+TP++FK+KVR+ VRRAQED
Sbjct:    6 SARGQASLLLMRQLKDLNKNTDSGFSAGLVDDNNPFEWQVILSGPPETIYEGGLFKARLSFPADYPFMPPTMKFETAMWHPNVYKDGRVCISILHPPGNDPAQYELASERWSPVHTVETILLSVISMLASPNDESAANLDAAKEWRDTPDVFKRKVRDAVRRAQED 171          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A5J4YJ57 (Ubiquitin-conjugating enzyme E2 7 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ57_PORPP)

HSP 1 Score: 275 bits (703), Expect = 1.900e-92
Identity = 126/167 (75.45%), Postives = 151/167 (90.42%), Query Frame = 0
Query:    2 ASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            +  +Q+A+LL++QLKELNK+  SGFSAGLVDDSNPFEWQ+ILTGPPDT Y+GGLFKA+++FP E+P+MPPTMRF S+MWHPNIY DG+VCISILH PG DPN YE+A ERW PVHTVESIL+SVISML+ PNDESAANLDAAK+WRE PE FKKKV++TVR+AQE++
Sbjct:   13 SQTAQSALLLLKQLKELNKDPHSGFSAGLVDDSNPFEWQLILTGPPDTLYDGGLFKARMTFPHEFPFMPPTMRFSSEMWHPNIYPDGRVCISILHPPGDDPNHYESAMERWNPVHTVESILISVISMLASPNDESAANLDAAKQWREDPEAFKKKVKQTVRKAQEEI 179          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A7S0ZB97 (Hypothetical protein (Fragment) n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB97_9RHOD)

HSP 1 Score: 274 bits (700), Expect = 2.840e-92
Identity = 127/158 (80.38%), Postives = 145/158 (91.77%), Query Frame = 0
Query:    2 ASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRE 159
            +  SQAA+LLMRQL+ELNKN DSGFSAGLVDDSNPFEWQ+ILTGP DT YEGGLFKA+++FP +YP+MPP+M+F SDMWHPN+YKDG+VCISILH PG+DPNQYENASERW+PVHTVESILVSV+SMLS PNDESAANLDAAK+WRE    FKKKVR+
Sbjct:    3 SKTSQAALLLMRQLQELNKNPDSGFSAGLVDDSNPFEWQIILTGPADTPYEGGLFKARMTFPQDYPFMPPSMKFTSDMWHPNVYKDGRVCISILHPPGNDPNQYENASERWMPVHTVESILVSVVSMLSSPNDESAANLDAAKQWREDNAGFKKKVRQ 160          
BLAST of Ggra8950.t1 vs. uniprot
Match: M2W4X1 (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4X1_GALSU)

HSP 1 Score: 269 bits (688), Expect = 2.700e-90
Identity = 125/163 (76.69%), Postives = 146/163 (89.57%), Query Frame = 0
Query:    5 SQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQED 167
            SQAA+LLM+QLKELN+N D GFSAGLVD++NPFEWQVIL+GPPDT YEGG+FKA+L FPP+YP MPPTMRF S+MWHPN+Y+DG+VCISILH PG DP+ YE+ASERW  VHTVESILVSVISML+ PNDES ANLDAAKEWRE  ++FKKKVR  VR++QE+
Sbjct:    7 SQAALLLMKQLKELNRNPDCGFSAGLVDETNPFEWQVILSGPPDTLYEGGVFKARLVFPPDYPVMPPTMRFTSEMWHPNVYQDGRVCISILHPPGDDPHNYEDASERWTAVHTVESILVSVISMLASPNDESPANLDAAKEWREDQQLFKKKVRRIVRKSQEE 169          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A199W5H5 (Ubiquitin-conjugating enzyme E2 7 n=11 Tax=Mesangiospermae TaxID=1437183 RepID=A0A199W5H5_ANACO)

HSP 1 Score: 243 bits (620), Expect = 5.750e-80
Identity = 115/168 (68.45%), Postives = 136/168 (80.95%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            MA+ SQA++LL +QLK+L +N   GFSAGLVDDSN FEW V + GPPDT YEGG F A +SFPP YP  PPT+RF S+MWHPN+Y DG+VCISILH PG DPN YE ASERW PVHTVESI++S+ISMLS PNDES AN++AAK+WR+  E FKKKVR  VR++QE L
Sbjct:    1 MAATSQASLLLQKQLKDLTRNPVDGFSAGLVDDSNVFEWNVTIIGPPDTLYEGGYFNAIMSFPPNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKDWRDRREEFKKKVRRIVRKSQEML 168          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A6I9S4S4 (ubiquitin-conjugating enzyme E2 7 isoform X2 n=10 Tax=Eukaryota TaxID=2759 RepID=A0A6I9S4S4_ELAGV)

HSP 1 Score: 243 bits (620), Expect = 5.750e-80
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            MAS SQA++LL +QL++L+KN   GFSAGLVDD+N FEW V + GPPDT YEGG F A +SFP  YP  PPT+RFIS+MWHPN+Y DG+VCISILHAPG DPN YE ASERW PVHTVESI++S+ISMLS PNDES AN++AAKEWRE  + FKKKV   VRR+QE L
Sbjct:    1 MASTSQASLLLHKQLRDLSKNPVDGFSAGLVDDNNIFEWSVTIIGPPDTLYEGGYFNAIMSFPSNYPNSPPTVRFISEMWHPNVYPDGRVCISILHAPGEDPNGYELASERWSPVHTVESIVLSIISMLSSPNDESPANIEAAKEWRERRDEFKKKVSRIVRRSQEML 168          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A199W1D0 (Ubiquitin-conjugating enzyme E2 7 n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A199W1D0_ANACO)

HSP 1 Score: 243 bits (619), Expect = 8.170e-80
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            MA++SQA++LL +QLK+L+KN   GFSAGLVDDSN FEW V + GPPDT YEGG F A +SFP  YP  PPT+RF S+MWHPN+Y DG+VCISILHAPG DPN YE ASERW PVHTVESI++S+ISMLS PNDES AN++AAKEWRE  + FKKKV   VRR+QE L
Sbjct:    1 MAAHSQASLLLHKQLKDLSKNPVDGFSAGLVDDSNIFEWSVTIIGPPDTLYEGGYFNAIMSFPKNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHAPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRERRDEFKKKVSRIVRRSQEML 168          
BLAST of Ggra8950.t1 vs. uniprot
Match: A0A388L0X6 (UBC core domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L0X6_CHABU)

HSP 1 Score: 242 bits (617), Expect = 1.590e-79
Identity = 115/164 (70.12%), Postives = 133/164 (81.10%), Query Frame = 0
Query:    3 SNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQE 166
            S +QA++LL RQLKEL +N   GFSAGLVDDSN FEWQV + GPPDT+YEGG F A + FP  YP  PPT+RF SDMWHPN+Y DG+VCISILH+PG DPN YE ASERW PVHTVE+IL+S+ISMLS PNDES AN+DAAKEWRE  E FKKKV   VR++Q+
Sbjct:    2 SETQASLLLRRQLKELTRNPVDGFSAGLVDDSNVFEWQVTIIGPPDTFYEGGFFNAIMVFPTNYPNTPPTVRFTSDMWHPNVYPDGRVCISILHSPGDDPNGYELASERWSPVHTVETILLSIISMLSSPNDESPANIDAAKEWRENREDFKKKVGRIVRKSQD 165          
The following BLAST results are available for this feature:
BLAST of Ggra8950.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM78.760e-11696.41Ubiquitin-conjugating enzyme E2 7 n=2 Tax=Rhodymen... [more]
A0A7S1XC241.140e-9480.49Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6PGW91.620e-9477.71UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A5J4YJ571.900e-9275.45Ubiquitin-conjugating enzyme E2 7 n=1 Tax=Porphyri... [more]
A0A7S0ZB972.840e-9280.38Hypothetical protein (Fragment) n=2 Tax=Timspurcki... [more]
M2W4X12.700e-9076.69Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A199W5H55.750e-8068.45Ubiquitin-conjugating enzyme E2 7 n=11 Tax=Mesangi... [more]
A0A6I9S4S45.750e-8069.64ubiquitin-conjugating enzyme E2 7 isoform X2 n=10 ... [more]
A0A199W1D08.170e-8069.64Ubiquitin-conjugating enzyme E2 7 n=3 Tax=Mesangio... [more]
A0A388L0X61.590e-7970.12UBC core domain-containing protein n=1 Tax=Chara b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 9..166
e-value: 7.0E-63
score: 224.9
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 2..167
NoneNo IPR availablePANTHERPTHR24067:SF312OS01G0839700 PROTEINcoord: 2..167
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 3..167
e-value: 5.7E-60
score: 203.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..163
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 11..160
e-value: 1.3E-47
score: 160.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 6..166
score: 50.46912
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 10..161
e-value: 1.59833E-61
score: 184.713
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 80..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:955173..955982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8950.t1Ggra8950.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 955173..955982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8950.t1 ID=Ggra8950.t1|Name=Ggra8950.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=169bp
MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTW
YEGGLFKAKLSFPPEYPYMPPTMRFISDMWHPNIYKDGKVCISILHAPGS
DPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETP
EIFKKKVRETVRRAQEDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS