Ggra8943.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8943.t1
Unique Name	Ggra8943.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	148

Homology

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BLAST of Ggra8943.t1 vs. uniprot
Match: V5NG23 (Ubiquitin-conjugating enzyme n=3 Tax=Rhodymeniophycidae TaxID=2045261 RepID=V5NG23_GRALE)

HSP 1 Score: 306 bits (783), Expect = 1.710e-105
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147
            MALKRIKKELQDLGKDPPSNCSAGPA+DDLFNWQA+IMGPPDSPYSGGVYFL IHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ
Sbjct:    1 MALKRIKKELQDLGKDPPSNCSAGPAADDLFNWQASIMGPPDSPYSGGVYFLNIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147

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BLAST of Ggra8943.t1 vs. uniprot
Match: R7QFA7 (UBC core domain-containing protein n=3 Tax=Rhodophyta TaxID=2763 RepID=R7QFA7_CHOCR)

HSP 1 Score: 300 bits (768), Expect = 3.320e-103
Identity = 141/147 (95.92%), Postives = 143/147 (97.28%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147
            MALKRI KELQDLGKDPPSNCSAGPA DDLF+WQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISF TRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNR RYE+TAREWTRKYAQ
Sbjct:    1 MALKRINKELQDLGKDPPSNCSAGPAGDDLFHWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFTTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRQRYEETAREWTRKYAQ 147

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BLAST of Ggra8943.t1 vs. uniprot
Match: M2XRN0 (Ubiquitin-conjugating enzyme E2 n=4 Tax=Bangiophyceae TaxID=2797 RepID=M2XRN0_GALSU)

HSP 1 Score: 283 bits (725), Expect = 1.200e-96
Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MA KRI KELQDLG+DPPSNCSAGP  DDLF+WQATIMGPPDSPY+GGV+FL IHFPTDYPFKPPK+ F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQ YKTNR +YE+TAREWTRKYA
Sbjct:    1 MATKRITKELQDLGRDPPSNCSAGPVGDDLFHWQATIMGPPDSPYAGGVFFLNIHFPTDYPFKPPKVQFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQLYKTNRGKYEETAREWTRKYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: A0A194W8P5 (UBC core domain-containing protein n=11 Tax=leotiomyceta TaxID=716546 RepID=A0A194W8P5_9PEZI)

HSP 1 Score: 276 bits (707), Expect = 6.680e-94
Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKTNRA+YE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTNRAQYESTAREWTRKYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: R7YU66 (Ubiquitin-conjugating enzyme E2-16 kDa n=9 Tax=leotiomyceta TaxID=716546 RepID=R7YU66_CONA1)

HSP 1 Score: 276 bits (706), Expect = 9.490e-94
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  DDLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPIGDDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: A0A7J7IE24 (Ubiquitin-conjugating enzyme E2 4 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IE24_9RHOD)

HSP 1 Score: 275 bits (704), Expect = 1.920e-93
Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLGKDPP+NCSAGP  DDLF+WQATI+GPPDSPY+GGVYFL IHFPTDYPFKPPK+ F T+IYHPNINSNGSICLDILR+QWSPALT+SKVLLSICSLLTDPNPDDPLVP+IA  YKTNRA+YE+ AREWTR+YA
Sbjct:    1 MALKRISKELVDLGKDPPANCSAGPVGDDLFHWQATIIGPPDSPYAGGVYFLNIHFPTDYPFKPPKVQFTTKIYHPNINSNGSICLDILREQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAHKYKTNRAKYEEEAREWTRRYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: H1VKL9 (Ubiquitin conjugating enzyme n=42 Tax=Sordariomycetes TaxID=147550 RepID=H1VKL9_COLHI)

HSP 1 Score: 275 bits (703), Expect = 2.720e-93
Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: A0A1E3QAQ6 (UBC core domain-containing protein n=5 Tax=saccharomyceta TaxID=716545 RepID=A0A1E3QAQ6_LIPST)

HSP 1 Score: 275 bits (702), Expect = 3.870e-93
Identity = 125/146 (85.62%), Postives = 137/146 (93.84%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPY+GGV+FL+IHFPTDYPFKPPK+SF TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RA+YE TAREWTRKYA
Sbjct:    1 MALKRISKELSDLGRDPPSSCSAGPIGEDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVSFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRAKYEATAREWTRKYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: S3CVI1 (Ubiquitin conjugating enzyme n=2 Tax=Ascomycota TaxID=4890 RepID=S3CVI1_OPHP1)

HSP 1 Score: 275 bits (702), Expect = 3.870e-93
Identity = 125/146 (85.62%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RA+YE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRAKYEGTAREWTRKYA 146

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BLAST of Ggra8943.t1 vs. uniprot
Match: A0A166RZY3 (Ubiquitin-conjugating enzyme E2-16 kDa (Fragment) n=2 Tax=Colletotrichum spaethianum species complex TaxID=2707349 RepID=A0A166RZY3_9PEZI)

HSP 1 Score: 275 bits (703), Expect = 5.210e-93
Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:   20 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 165

The following BLAST results are available for this feature:

BLAST of Ggra8943.t1 vs. uniprot

BLAST of Ggra8943.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
V5NG23	1.710e-105	97.96	Ubiquitin-conjugating enzyme n=3 Tax=Rhodymeniophy...	[more]
R7QFA7	3.320e-103	95.92	UBC core domain-containing protein n=3 Tax=Rhodoph...	[more]
M2XRN0	1.200e-96	88.36	Ubiquitin-conjugating enzyme E2 n=4 Tax=Bangiophyc...	[more]
A0A194W8P5	6.680e-94	86.30	UBC core domain-containing protein n=11 Tax=leotio...	[more]
R7YU66	9.490e-94	86.99	Ubiquitin-conjugating enzyme E2-16 kDa n=9 Tax=leo...	[more]
A0A7J7IE24	1.920e-93	84.93	Ubiquitin-conjugating enzyme E2 4 n=2 Tax=Cyanidia...	[more]
H1VKL9	2.720e-93	86.30	Ubiquitin conjugating enzyme n=42 Tax=Sordariomyce...	[more]
A0A1E3QAQ6	3.870e-93	85.62	UBC core domain-containing protein n=5 Tax=sacchar...	[more]
S3CVI1	3.870e-93	85.62	Ubiquitin conjugating enzyme n=2 Tax=Ascomycota Ta...	[more]
A0A166RZY3	5.210e-93	86.30	Ubiquitin-conjugating enzyme E2-16 kDa (Fragment) ...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..147 e-value: 1.6E-76 score: 270.2
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..145
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..145
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..141 e-value: 5.7E-54 score: 181.6
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..147 score: 61.358101
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 4..142 e-value: 9.03487E-73 score: 212.448
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..147 e-value: 4.6E-74 score: 249.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..146
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000860_pilon	contig	tig00000860_pilon:881391..882289 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8943.t1	Ggra8943.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000860_pilon 881391..882289 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8943.t1 ID=Ggra8943.t1|Name=Ggra8943.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=148bp
MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVY
FLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVS
KVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS