Ggra8939.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8939.t1
Unique NameGgra8939.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
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BLAST of Ggra8939.t1 vs. uniprot
Match: A0A2V3J5I9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5I9_9FLOR)

HSP 1 Score: 152 bits (383), Expect = 8.950e-43
Identity = 81/100 (81.00%), Postives = 91/100 (91.00%), Query Frame = 0 
Query:    1 MVVSEIVAATMIAVYGLRNSYRIVLRAERLVRRTIRRPAPIIEGYHSFPRFFIRNVFRAGLEIAMRWEGRAKNAAQLAADARLRAKRTSQAVAHRIEDVR 100
            MVVSEIVAATMIAV GL+NSYRIVL+ ER+VRR IRRPAPI+EGY +FPRFFIR VFRAGL IAMRWEGRAKNAAQLAADAR+RA++TS+AV+ RI D R
Sbjct:    1 MVVSEIVAATMIAVCGLKNSYRIVLKGERVVRRAIRRPAPIVEGYDTFPRFFIRKVFRAGLVIAMRWEGRAKNAAQLAADARMRARKTSKAVSKRIGDAR 100
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BLAST of Ggra8939.t1 vs. uniprot
Match: R7QKR1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKR1_CHOCR)

HSP 1 Score: 125 bits (314), Expect = 3.360e-32
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0 
Query:   11 MIAVYGLRNSYRIVLRAERLVRRTIRRPAPIIEGYHSFPRFFIRNVFRAGLEIAMRWEGRAKNAAQLAADARLRAKRTSQAVAHRIE 97
            MIAV G RNSYRI+L+ ERL+RR IRRP+ I+EGY SFPR+FIR VFRAGL IAMRWEGRAKNAAQ+AADAR+RA+   +AV+ R+E
Sbjct:    1 MIAVCGFRNSYRIILKGERLIRRKIRRPSSIVEGYDSFPRYFIRRVFRAGLVIAMRWEGRAKNAAQMAADARMRARSAQKAVSSRVE 87
The following BLAST results are available for this feature:
BLAST of Ggra8939.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5I98.950e-4381.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKR13.360e-3272.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:871089..871946 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8939.t1Ggra8939.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 871089..871946 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8939.t1 ID=Ggra8939.t1|Name=Ggra8939.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MVVSEIVAATMIAVYGLRNSYRIVLRAERLVRRTIRRPAPIIEGYHSFPR
FFIRNVFRAGLEIAMRWEGRAKNAAQLAADARLRAKRTSQAVAHRIEDVR
QSAEDVRDRAKDQTRIMREKAARLRQRAEHAKDRAVAAKDKLIDMKEKVQ
ERVSPKTNSRKFFSDARSILPPERKPSPMVHTRISES*
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