Ggra8932.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8932.t1
Unique NameGgra8932.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length333
Homology
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A2V3J4F6 (Protein TIC 21, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F6_9FLOR)

HSP 1 Score: 272 bits (696), Expect = 2.240e-86
Identity = 154/306 (50.33%), Postives = 207/306 (67.65%), Query Frame = 0
Query:   41 RTAFYNSRA----LVIASLNSEGEGEPENETGSSERQSP--QKGSVEDPGQFFTRLEEARKGRKEVLNDVRSLETDPGNVGNKDVE-----------ISTKSAPLEQEAIPSGLQAASRALWRVGWFTWWLQLVLTVIAAVILLFAFLFPGVNVRSAASAVGFAVSGVGIIFAFFSLFWTYGYTRLALWLGEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIWFRARERKWTAKGNAAE 329
            R + Y SR     ++  +LNSE E +P  +       +P  + G  +D  +   +LE+      + + +  S + +P       V            +   + P E+E +P GL+ ASRALWR+GWFTWW QL+LTVIAAVILLFAF+FPG+NVRSAASAVG  VSGVG+I AF SLFWTYGYTRLA+WL   Q  EKAK+RINR+LRFGLLFS+ GM++LL+GLQA+VGTLLAR+ G G+ + Y P+P  A G ++ ++ LVQPVDILV+QACAN LTGL++ALV+T WFR++E +W+    ++E
Sbjct:   42 RPSLYVSRTFHYPIIYGTLNSEAE-KPSKDENKDNSMTPGTEAGIQKDSERLLKKLEDLSNRNDKTVTEASSPQENPSGTPKSSVSDVPPVTALSAAVPAVATPTEKEEVPEGLRKASRALWRIGWFTWWAQLILTVIAAVILLFAFVFPGINVRSAASAVGLGVSGVGVIIAFLSLFWTYGYTRLAIWLRVNQHPEKAKVRINRKLRFGLLFSVVGMVVLLVGLQAVVGTLLARVFG-GISATYGPAP--APGGLVPSASLVQPVDILVIQACANALTGLMMALVATTWFRSKESRWSESLKSSE 343          
BLAST of Ggra8932.t1 vs. uniprot
Match: R7QD54 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD54_CHOCR)

HSP 1 Score: 209 bits (533), Expect = 4.490e-62
Identity = 128/257 (49.81%), Postives = 167/257 (64.98%), Query Frame = 0
Query:   81 EDPGQFFTRLEEARKGRKEVLNDVRS-LETDPGNVGNKDV--EISTKSAPLEQEAIPSG---LQAASRALWRVGWFTWWLQLVLTVIAAVILLFAFLFPGVNVRSAASAVGFAVSGVGIIFAFFSLFWTYGYTRLALWLGEKQIQ-----EKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVS-PYPP-SPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIWFRARERKWTAK 324
            E P   F +L   R+ R      V+S LET   N  N+ +      +  P+ +   P      + A+RA WR+GW TWWLQL+LTV++ VIL+F+F FPGVNV+++ASA+GF V+GVG++FAF SLFWTY YTRL+LWL   ++      + A+ RINR+LR GL  +I GMI+ L GLQAIVGTLLARLL +GV + PY      A +  V   SG+VQPVDILVVQA AN + GLL AL +T+W R R +KW  K
Sbjct:   71 EGPEVLFEKLNARRESRNSNSGVVQSSLET--ANDMNQPLFNREGEELKPVTEVVAPDNGMDFKKAARAFWRIGWMTWWLQLILTVVSGVILIFSFAFPGVNVKTSASALGFIVTGVGVLFAFVSLFWTYSYTRLSLWLSGDRVSTNRTPQVAQTRINRKLRIGLGIAIVGMIVSLTGLQAIVGTLLARLLSSGVATTPYASYQMGAGAAGVAPGSGIVQPVDILVVQASANAMMGLLAALATTVWLRGRSKKWQPK 325          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A1X6P373 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P373_PORUM)

HSP 1 Score: 147 bits (372), Expect = 3.630e-38
Identity = 96/198 (48.48%), Postives = 123/198 (62.12%), Query Frame = 0
Query:  139 AASRALWRVGWFTWWLQLVLTVIAAVILLFAFLFPGVNVRSAASAVGFAVSGVGIIFAFFSLFWTYGYTRLALWLGEKQIQEKAKLR-------INRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIWFRARERKWTAKGNAAE 329
            AAS +LWR GW  WW Q +LTVIA VIL+F+F FPGV V ++AS +G  ++ VG++    S  WTYGYTRL+L LG                  I +RLR G+  ++ G+ + LLG+QAIVGTLLARLL +G+   Y      A G V    G VQPVDILVVQA ANG+ GL+ AL  ++W   R  KW A+G AA+
Sbjct:  141 AASASLWRFGWIAWWSQFILTVIAGVILVFSFAFPGVAVATSASKIGTLLAAVGVVTGLVSNVWTYGYTRLSLSLGRAXXXXXXXXXXXXXXXSIRKRLRVGVGLAMAGLTVSLLGVQAIVGTLLARLLSSGLGESY--GTVRAIGRV---PGGVQPVDILVVQAAANGMLGLVCALGVSLWLSTRIDKW-ARGIAAK 332          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A7J7II36 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II36_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 2.070e-22
Identity = 82/231 (35.50%), Postives = 119/231 (51.52%), Query Frame = 0
Query:  106 SLETDPGNVGNKDVEISTKSAPLEQEAIPSGLQAA--SRALWRVGWFTWWLQLVLTVIAAVILLFAFLF----PGVN-VRSAASAVGFAVSGVGIIFAFFSLFWTYGYTRLA--LWLGEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIW----FRARERKWTA 323
            ++E DPG+  N+   + T+      E    GL  +  S AL+R+G   WW QL+L+++A  I LFA        GV+   + A++ G   +G+G++FAF S+FW YGY RLA  L   +K         + R LR G+  +I GM + L+G Q+I G LLA+ L  GV  P P     +      T G VQ +DI VVQA  N L    + L + +W    FR  +R+  A
Sbjct:   63 NIEEDPGD--NEAGSVGTRGP----EGSNGGLDVSRLSAALYRLGAAAWWAQLLLSIVAGGITLFAVAILHGSRGVSGATTTAASTGLLFAGIGLVFAFLSVFWAYGYIRLARRLMRAQKMGYGVRSENVFRTLRVGVFINILGMALTLIGAQSISGVLLAKALSQGVAGPLPFYATGSIQAGGGTVGYVQALDIFVVQANTNALLSHFVGLCTALWMLWRFRGPQRRRAA 287          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A7S1XJJ2 (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJJ2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.030e-21
Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 0
Query:  141 SRALWRVGWFTWWLQLVLTVIAAVILLFAFLFP----GVNVRSAASAVGFAVSGVGIIFAFFSLFWTYGYTRLALWL--GEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLG-TGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIW 313
            ++ LWR GW +WW+Q VLTVIA++ LLFA  F     G     +  A G  ++G+G+  +  S+FWT+G+TR+A  L  GE          I R LR G++ ++ GM   L G + IVGTL+A++L   GV  P       A+G  ++ +  +Q +DI +VQA  N L   L +L  T+W
Sbjct:   23 AKKLWRAGWTSWWIQTVLTVIASITLLFARTFAAAAGGSTAIQSGGAGGLFLAGLGVSLSALSVFWTWGFTRVARRLRKGEDLTPRLEARLIRRALRTGIVLNLVGMFATLFGAEQIVGTLVAKVLSFQGVTGP-------AAGAYVAPTATLQALDIFIVQANTNTLLSHLCSLTITLW 195          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A7S4EBP2 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBP2_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 6.100e-18
Identity = 77/234 (32.91%), Postives = 114/234 (48.72%), Query Frame = 0
Query:  101 LNDVRSLETDPGNVGNKDVEISTKSAPLEQE------AIPSGLQAASRALWRVGWFTWWLQLVLTVIAAVILLFAFLF-PGVNVR-SAASAVGFAVSGVGIIFAFFSLFWTYGYTRLA-LWLGEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQP----VDILVVQACANGLTGLLIALVSTIWFRARERKW 321
            L  + +L   P    + D  I  ++A L          +P   +A   ALWRVGW +WW Q++LT I+AV+L FA +  P    +  AA A GF  +  G +F+  S FWT+   RLA L   E    +K   R  + LRFG   ++ GM + LL  + +VGTL+ + L          +P + +GV   T+         +D+ V+QA  N L    I+L+ST+   AR  KW
Sbjct:   25 LRTLSTLRAAPDADKSVDAAIDQRAAELASSKQIARATLPGNRRAL--ALWRVGWLSWWCQVILTTISAVVLTFAKVSAPSTATQPEAALASGFLFASAGAMFSLMSSFWTWRLVRLARLESSEASGVQKIVRRTQKALRFGAKLNLVGMALTLLAAEQVVGTLIMKAL---------VAPGSLAGVWSGTAPQAMQAFNTIDVFVIQATTNTLCAHFISLLSTLSLLARSVKW 247          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A7S3PX80 (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX80_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.040e-16
Identity = 71/203 (34.98%), Postives = 106/203 (52.22%), Query Frame = 0
Query:  132 AIPSGLQAASRALWRVGWFTWWLQLVLTVIAAVILLFAFLFPGVNVRSAASAV-----------GFAVSGVGIIFAFFSLFWTYGYTRLALWLGEKQ---IQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIWFRARERK 320
            AI   +Q  S  L R+ WF+WW Q++LTV+++V LLFA       +++++ AV           GF  +G G+  +F S+ WT+G TRL+  L +K+    Q K    I R +  G   ++ GM + L+G QAIVG L ++LL    V+ +  +  A S   L      QP+DILVVQA  N L    ++LV  +      RK
Sbjct:   90 AIDPLIQETSTNLRRITWFSWWSQVILTVVSSVTLLFA----RAVLKTSSGAVAGLPSVPSVSGGFVFAGSGVSLSFLSIIWTWGGTRLSRRLIKKKKNYSQTKVANMIRRTITIGATLNLFGMFVTLIGAQAIVGLLASKLLSMQGVTNFGITAAAVSAQTL------QPIDILVVQANTNLLLSHFVSLVCCLVMTNSVRK 282          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A7J7Q3Y6 (Uncharacterized protein (Fragment) n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3Y6_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 1.370e-15
Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = 0
Query:  131 EAIPSGLQAASRALWRVGWFTWWLQLVLTVIAAVILLFAFLFPGVNVRSAASAVGFAVSGVGIIFAFFSLFWTYGYTRLAL----WLGEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIW 313
            EA  S L  A++A+ R GW  +W+QL L+V++ VILLF+  F   +   A+      ++ VGI+  F S FW++GY RLA     +L    + +  K ++  ++  G+L +I GM   L+G+  +VG L+A+ L    V+P+     AASG        V  +D+ +VQA  N L G  ++L+ ++W
Sbjct:    3 EAARSSLSKATQAMSRYGWIGFWVQLTLSVVSGVILLFSVAFTSQSGPKAS----LYLTLVGILAGFLSTFWSFGYQRLASRMQEYLDGANVAKIKKQQVMEQITRGILINIVGMGSTLIGISTLVGLLVAKTLSNASVNPFM-GIAAASGY-----NPVLALDVFLVQAATNTLLGHFLSLLCSLW 179          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A7S0ASX4 (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASX4_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.510e-15
Identity = 72/203 (35.47%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  134 PSGL-QAASRALWRVGWFTWWLQLVLTVIAAVILLFA----FLFPGVNVRSAA-----SAVGFAVSGVGIIFAFFSLFWTYGYTRLA--LWLGEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGTGVVSPYPP--SPNAASG--VVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIWFRARERK 320
            P GL ++ +  L R  WF+WW Q++LT I+AVILLFA        G    SAA     ++  F + GVGI  +F S+FWT+G  RL+  L  G+    + A L + R +      +++GM++ L+G   I+G L  ++L  G +SP+    +   A G  V L T   VQP+DIL+VQA AN L    ++L  +++     +K
Sbjct:   96 PDGLIESTAYTLRRTSWFSWWTQVILTTISAVILLFARSVGLAAVGAASNSAAGVKNQASASFFIGGVGITISFASIFWTWGGARLSNRLLRGKTNRIQSANL-LRRAITVASTLNLSGMLVTLMGTFVIIGGLATKVLTAGGLSPFGAVGAGGIAGGGAVALQT---VQPLDILIVQANANTLLSHFVSLFVSLFLTRYVKK 294          
BLAST of Ggra8932.t1 vs. uniprot
Match: A0A3D1PAX5 (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1PAX5_9CYAN)

HSP 1 Score: 82.4 bits (202), Expect = 4.770e-15
Identity = 65/186 (34.95%), Postives = 102/186 (54.84%), Query Frame = 0
Query:  135 SGLQAASRALWRVGWFTWWLQLVLTVIAAVILLFAFLFPGVNVR----SAASAVGFAVSGVGIIFAFFSLFWTYGYTRLALWLGEKQ-IQEKAKLRINRRLRFGLLFSITGMIILLLGLQAIVGTLLARLLGT--GVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANGLTGLLIALVSTIW 313
            S LQA +R L  +GW  +W+QLVL VI ++ILLFA +  G N R    +  +  G   +  GI+   FS++W++ YTR+A  L   +  Q  +K    + +R GL+ ++ GM++ LLG +AIVG LLA+ L    GV +   P+             L+Q +DI VVQA  N +    + + +++W
Sbjct:   12 SSLQAIARELRLIGWIGFWIQLVLVVICSLILLFAAVSGGRNDRFNSTNPGTGPGLFFTLCGILVLCFSIYWSFRYTRIARRLRSPEPSQRPSKGNAIQVVRIGLIVNLAGMLLTLLGTEAIVGGLLAKSLTQPQGVATFNDPTR------------LIQSLDIFVVQASINVVAAQFVGIATSLW 185          
The following BLAST results are available for this feature:
BLAST of Ggra8932.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4F62.240e-8650.33Protein TIC 21, chloroplastic n=1 Tax=Gracilariops... [more]
R7QD544.490e-6249.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P3733.630e-3848.48Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7II362.070e-2235.50Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S1XJJ24.030e-2137.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4EBP26.100e-1832.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3PX806.040e-1634.98Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7J7Q3Y61.370e-1533.69Uncharacterized protein (Fragment) n=1 Tax=Scenede... [more]
A0A7S0ASX44.510e-1535.47Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A3D1PAX54.770e-1534.95Uncharacterized protein n=1 Tax=Cyanobacteria bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..88
NoneNo IPR availablePANTHERPTHR34548:SF2PROTEIN TIC 21, CHLOROPLASTICcoord: 123..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..314
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..332
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..211
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 292..314
IPR022051Protein of unknown function DUF3611PFAMPF12263DUF3611coord: 137..314
e-value: 1.6E-36
score: 125.8
IPR022051Protein of unknown function DUF3611PANTHERPTHR34548PROTEIN TIC 21, CHLOROPLASTICcoord: 123..313
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 142..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:855999..856997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8932.t1Ggra8932.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 855999..856997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8932.t1 ID=Ggra8932.t1|Name=Ggra8932.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=333bp
MTRNANPAFVGSNLSTFLRINPCIGTSRRFITSRSRRAHERTAFYNSRAL
VIASLNSEGEGEPENETGSSERQSPQKGSVEDPGQFFTRLEEARKGRKEV
LNDVRSLETDPGNVGNKDVEISTKSAPLEQEAIPSGLQAASRALWRVGWF
TWWLQLVLTVIAAVILLFAFLFPGVNVRSAASAVGFAVSGVGIIFAFFSL
FWTYGYTRLALWLGEKQIQEKAKLRINRRLRFGLLFSITGMIILLLGLQA
IVGTLLARLLGTGVVSPYPPSPNAASGVVLSTSGLVQPVDILVVQACANG
LTGLLIALVSTIWFRARERKWTAKGNAAETSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022051DUF3611
IPR036259MFS_trans_sf