Ggra8927.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8927.t1
Unique NameGgra8927.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length783
Homology
BLAST of Ggra8927.t1 vs. uniprot
Match: A0A2V3J4G4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4G4_9FLOR)

HSP 1 Score: 582 bits (1501), Expect = 2.310e-195
Identity = 358/791 (45.26%), Postives = 482/791 (60.94%), Query Frame = 0
Query:    3 SNSGEDHWLWEGKGTPDEKQERRRVFYKSIVLKYGEDGSTRQYNVGDTVNMAGGEDIWVAQIIDLFQVNAHDPELRQLLRTDSLKNESKHHYELKRCTLRWFYNFMDMNRHSLRNAKWPKFLEDEIWYSDHIERPGYNSVQVIDGRAWLFDNMREKNEFLANPPEDYDEERDIIRIVRGFVDSKRDHLPVRLLLDGELKWLQTNPSDDKDLYSNSKARFEQRSESPATQKRPKH--RRTSLREPVNVDEDEFDPADVKPKSQKRRHRAPHAK--AVPEVSTPPRRQFRRRKVTIDEDEESPMQDIEDDPNDNIPLSQLRPSTSRPKPPEQPPEQPTDIDKLNVEVRDLVNSLNASAFADDG-PEPSAKPPEQSETKTSRPYVPV----DEDEITPAPPKLKSQRKPLVQKGKSKTAVAPRSKKRPAKPSPPVNN--EDAIIIIDSDEEEPQPKVQPQRSPPKLQRFHPGAANRAYRGGRHGKPSTRNRSSFMPTSRENASTPSKKQSDPQRDDPKRGPSGSGVDTAPRAKRVHKSKSSKDTKAEAQSR-PKEGKGAFVKESRNFSAAVRNN--SFDHSDEITPVNGSRGSTEGRGTKRVAADDIGHHQNLAKRRSLGPAVKTPKPPEPRPDKVQAAGRSADNRKEAVAKTPTDKNP-GSKLRERPGARKV-VSDNVIDVNDSDTEPDDRRLQEDGPSVLKVTQDQRKLTDNVYRIHGRMNAADKDFLANELEWLINEVVLFHDGQKGSFNEEEYGRVLRDQLVQKRERQIGSLREVPVFASDSHPKIREPK 777
            S+  +DHW W  KG PD K++R+R++YKSI ++   D   R+Y VGDTVNMAGGE+ WVAQIIDLFQV   DPELRQLLRTDS+KNESKHHYELKRCTLRWFYN  DM+ ++++ AKWPK LE E+W+SDH+E  G NSVQVIDGRAW+F    E+ +FL +PP DY+E RD IRIVRG+VDS RDHLP+R L  GEL+WL  NPS DK+LY NSK RF  R++SP          R T++REPVNVDEDEF+P + KP   +   +A  ++    P    PPRR     K+T+D+DEE+   D +D+  D+IPLS L+P             Q  DID++N EVRDLV+ LNASAFAD+  P P+++    S+       VP     DED+ITPAP          V + K + AV+        KP PP +   ++ +I++DSD+EEP     P + P KLQRFH GAANRAYRGGRHG+PS +NRSSFMPTS++ AS  S+K+SD  + D K+      +   P  +    SK+    K +  S+   + +     + R+  AA RNN  + D ++ +            RGTKR    D   H+   KRR+L  +   PKP   R  +  A     + ++  +   P+ K+P  S +R+R  ++K  V  N I    SD + DD  +Q++    L   +  +K  DN++RI+  MN  D++F+   LEWLI E + FH G+KGS N EEY R+LRD+L+ KR+ +IGSL E+PVF SD    +  P+
Sbjct:    2 SSFRDDHWFWSKKGIPDVKRDRKRIYYKSISVQNVRDNQIREYKVGDTVNMAGGEERWVAQIIDLFQVTPRDPELRQLLRTDSVKNESKHHYELKRCTLRWFYNLSDMDHNTMKKAKWPKSLEGEVWFSDHVEEDGSNSVQVIDGRAWIFATESERTKFLKDPPSDYNENRDKIRIVRGYVDSTRDHLPLRHLAPGELRWLLDNPSPDKNLYENSKLRFAARTKSPXXXXXXXXXXRHTTIREPVNVDEDEFEPEESKPSRDREHKKAVRSQHHVAPLRKRPPRRM----KITVDDDEETASNDRDDESRDDIPLSMLKPHG-----------QDEDIDQVNDEVRDLVHKLNASAFADEETPIPTSEIFNHSDEPVVAEPVPTVPPEDEDQITPAP----------VSRLKKRRAVS-------EKPKPPASKLMQNEVIVLDSDDEEPFKTTVPLQKP-KLQRFHTGAANRAYRGGRHGRPSAKNRSSFMPTSKDQASHLSRKKSDTLQTDKKQN----FIPAIPDLRTKEASKTKDPMKVDRGSKFGIKDRRVSTNDHRSTVAASRNNVVTLDDNEGLVLDQSVGKDASSRGTKRTTNLDDARHRLSPKRRALSSSGAKPKPLRLRTTEDHAGIEDVEMQEVVL---PSPKSPRDSAVRDRVQSQKQDVGGNAIKPK-SDPDVDDAEIQKESRKALHAMKGHKKALDNIHRIYDDMNDIDQEFIWENLEWLIEESLRFHKGEKGSVNLEEYERILRDRLLAKRKEEIGSLSELPVFKSDPSKGVAAPE 751          
BLAST of Ggra8927.t1 vs. uniprot
Match: R7Q942 (BAH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q942_CHOCR)

HSP 1 Score: 219 bits (558), Expect = 4.150e-59
Identity = 138/359 (38.44%), Postives = 197/359 (54.87%), Query Frame = 0
Query:   10 WLWEGKGTPDEKQERRRVFYKSIVLKYGEDGSTRQYNVGDTVNMAG-GEDIWVAQIIDLFQVNAHDPELRQLLRTDSLKNESKHHYELKRCTLRWFYNFMDMNRHSLRNAKWPKFLEDEIWYSDHIERPGYNSVQVIDGRAWLFDNMREKNEFLANPPEDYDEERDIIRIVRGFVDSKRDHLPVRLLLDGELKWLQTNPSDDKDLYSNSKARFEQ---------RSESPATQKRPKHRRTS--LREPVNVDEDEFDPADVKPKSQKRRHRAPHAKAVPEVSTPPRRQFRRRKVTIDEDEESPMQDIEDDPNDNIPLSQLRPSTSRPKPPEQPPEQPTDIDKLNVEVRDLVNSLNASAFA 356
            W W   G   +K+   RVF++ I  +   D   R Y +GDTV M G  +D W AQI++LF+    D ELR++L+ D  K  +   YEL R TLRWFYN  DMN+H+LR++  P  ++ EI++SDH+E+ GYN + VI+G+AWL  +  E+ EFL NPPE Y+ + D +RIVR FV+S    L VR L  GEL  L  NP+D+KDL+  S+ R  +         R  S  T  +P  R+ S  +R+P+ +++DEFDP + K  +  +      A  +P  S     Q RRRK  +         DIEDD +D     ++ PS          P +   + + N EV DLV SLN +A +
Sbjct:   10 WSWTSHG---QKKHLGRVFHRKIQARRLSDDLVRTYKIGDTVVMKGENDDTWTAQIVELFEATEDDEELREVLQMDLRKINNVQGYELMRVTLRWFYNSSDMNKHTLRSSSCPNHIKHEIYFSDHVEKEGYNDITVIEGKAWLVSSKLEREEFLQNPPEGYERDMDQVRIVRCFVNSLSPDLAVRELDTGELAHLLKNPTDEKDLFETSRQRMRRLIHSDGSIIRPPSKGTGAKPPRRKRSRSIRKPIEIEDDEFDPKEKKDATDAQE--PARANKMPGKSGENTDQERRRKKQVI--------DIEDDDSDG----KVEPSVD--------PARLHSLQQANEEVLDLVASLNQNALS 343          
The following BLAST results are available for this feature:
BLAST of Ggra8927.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4G42.310e-19545.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9424.150e-5938.44BAH domain-containing protein n=1 Tax=Chondrus cri... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043151Bromo adjacent homology (BAH) domain superfamilyGENE3D2.30.30.490coord: 6..186
e-value: 1.7E-8
score: 36.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..680
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..657
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 554..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..548
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:835797..838145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8927.t1Ggra8927.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 835797..838145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8927.t1 ID=Ggra8927.t1|Name=Ggra8927.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=783bp
MASNSGEDHWLWEGKGTPDEKQERRRVFYKSIVLKYGEDGSTRQYNVGDT
VNMAGGEDIWVAQIIDLFQVNAHDPELRQLLRTDSLKNESKHHYELKRCT
LRWFYNFMDMNRHSLRNAKWPKFLEDEIWYSDHIERPGYNSVQVIDGRAW
LFDNMREKNEFLANPPEDYDEERDIIRIVRGFVDSKRDHLPVRLLLDGEL
KWLQTNPSDDKDLYSNSKARFEQRSESPATQKRPKHRRTSLREPVNVDED
EFDPADVKPKSQKRRHRAPHAKAVPEVSTPPRRQFRRRKVTIDEDEESPM
QDIEDDPNDNIPLSQLRPSTSRPKPPEQPPEQPTDIDKLNVEVRDLVNSL
NASAFADDGPEPSAKPPEQSETKTSRPYVPVDEDEITPAPPKLKSQRKPL
VQKGKSKTAVAPRSKKRPAKPSPPVNNEDAIIIIDSDEEEPQPKVQPQRS
PPKLQRFHPGAANRAYRGGRHGKPSTRNRSSFMPTSRENASTPSKKQSDP
QRDDPKRGPSGSGVDTAPRAKRVHKSKSSKDTKAEAQSRPKEGKGAFVKE
SRNFSAAVRNNSFDHSDEITPVNGSRGSTEGRGTKRVAADDIGHHQNLAK
RRSLGPAVKTPKPPEPRPDKVQAAGRSADNRKEAVAKTPTDKNPGSKLRE
RPGARKVVSDNVIDVNDSDTEPDDRRLQEDGPSVLKVTQDQRKLTDNVYR
IHGRMNAADKDFLANELEWLINEVVLFHDGQKGSFNEEEYGRVLRDQLVQ
KRERQIGSLREVPVFASDSHPKIREPKVRERD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043151BAH_sf