Ggra8917.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8917.t1
Unique NameGgra8917.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Homology
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A2V3J4H8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4H8_9FLOR)

HSP 1 Score: 216 bits (550), Expect = 3.390e-69
Identity = 109/162 (67.28%), Postives = 128/162 (79.01%), Query Frame = 0
Query:    9 FLALTLLLQTVQA-FFCTGRGGPRLVTINPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGSPVATLVSTGSLALDGLLVEIELDVAVSHPFVRRLVCK 169
            FLAL     T QA +FC      R+  INPPTLFDP PFG++HI VD KN VAH+AGQVAINQTG+IIGDTLAEQL+ETERN++ A++AVE+DISDI R+N FILN DP TD   FM TG RLGSPV TL+STG+LA++GLLVEIELD  VS  FVRRL+C+
Sbjct:    8 FLALIFCFHTTQATWFCLRTNNKRVRIINPPTLFDPVPFGFSHIAVDTKNFVAHVAGQVAINQTGAIIGDTLAEQLVETERNLLFALDAVEADISDITRVNAFILNFDPRTDLSTFMMTGKRLGSPVTTLISTGALAIEGLLVEIELDAVVSRSFVRRLICQ 169          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A2V3IR41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR41_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 6.870e-48
Identity = 91/171 (53.22%), Postives = 116/171 (67.84%), Query Frame = 0
Query:    1 MHFRTLLHFLALTLLLQTVQA-FFCTGRGGPRLVTINPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGSPV--ATLVSTGSLALDGLLVEIELDVAVSHPFVRRLVC 168
            MH R++   LAL  +LQ   A  +C  R   RLV INPPTL DP PFGY+ I VD +NAVAH+AGQ AINQTGS++G+T AEQL +T RN+ LA+EAVE+DI+DIL+     ++LDPST   +   + M  G P     + S+ SL   G+LVEI++DVAV   FVRRLVC
Sbjct:    1 MHIRSVFILLALLFVLQAADADAYCWRRQRRRLVRINPPTLLDPVPFGYSQIVVDTRNAVAHVAGQNAINQTGSLVGETFAEQLEQTLRNVELALEAVEADINDILKSILITVDLDPSTAEDILAASLMNAGGPAPPGIVFSSDSLLEPGVLVEIQVDVAVPESFVRRLVC 171          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A7M3M6S7 (Endoribonuclease L-PSP n=2 Tax=Streptomyces sp. SAJ15 TaxID=2011095 RepID=A0A7M3M6S7_9ACTN)

HSP 1 Score: 75.1 bits (183), Expect = 3.270e-14
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0
Query:   32 LVTINPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS--PVATLVSTGSLALDGLLVEIE 153
            L   NP  L DP PFGY+H+   R + V HIAGQ   +  G ++ +  A Q+     ++  A+EAV  D S ++RL  +I++ D      L        G   P  TL+   SLAL G+L E++
Sbjct:    3 LTITNPAALHDPVPFGYSHVVAARPSEVVHIAGQYGSDAQGGVVAEDFATQVETAFTHLGTALEAVGLDFSHVVRLGTYIVDHDTDKLEALVGPIRKIWGDRPPAQTLIGVASLALPGMLFEVD 126          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A829YFH3 (Enamine deaminase RidA n=3 Tax=Steroidobacter TaxID=469322 RepID=A0A829YFH3_9GAMM)

HSP 1 Score: 75.1 bits (183), Expect = 3.510e-14
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0
Query:   35 INPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGDT-LAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS---PVATLVSTGSLALDGLLVEIELDVAV 158
            INPP L+D   +G++H T+ +     H+AGQVA +  G+++G + LA Q  +   N+   ++A     +DI+R+  +++N  P    P+  E G   G    P  T +   +LAL   LVEIE   AV
Sbjct:    6 INPPELYDSVRYGFSHATLQKGGKTLHLAGQVAWDAEGNVVGGSDLAAQTRQALANLKAVLKAAGCSPADIVRIRTYVVNHTPDKLGPVLGEVGAFFGGATPPPNTFIGVAALALPDFLVEIEAIAAV 133          
BLAST of Ggra8917.t1 vs. uniprot
Match: RidA family protein n=1 Tax=Psychrobacter fulvigenes TaxID=533323 RepID=UPI0019183523 (RidA family protein n=1 Tax=Psychrobacter fulvigenes TaxID=533323 RepID=UPI0019183523)

HSP 1 Score: 73.2 bits (178), Expect = 1.890e-13
Identity = 42/129 (32.56%), Postives = 73/129 (56.59%), Query Frame = 0
Query:   34 TINPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIG-DTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS---PVATLVSTGSLALDGLLVEIELDVAV 158
            TINP  ++D   FG++H T  +   V H AGQ+A ++ G+ +G + LA+Q  +   N+   ++   +  +D++R+  +I++L+P+    +    G   G    PV TL+   SLA+ GLL+EIE+   V
Sbjct:    5 TINPSAMYDSLQFGFSHATKAQGKTVIHCAGQLAWDKDGNTVGKNDLAKQTEQVFNNLHTVLQESGATPADVVRMRTYIVDLEPANLEVVGKAIGKFYGEITPPVNTLIGVQSLAMPGLLIEIEMTAMV 133          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A6I3BB38 (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3BB38_9ACTN)

HSP 1 Score: 68.9 bits (167), Expect = 9.950e-12
Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   36 NPPTLFDP-SPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS-PVATLVSTGSLALDGLLVEIELDVAVSH 160
            N P L DP  P+ Y    V       ++AGQVA+++ G I+G T+ EQ  +  +NI +A+ AV SD+ +I+++N F+ ++    D     +T  +    P  T V   +L L GLL+E+++ VAVS+
Sbjct:   21 NVPGLVDPLEPYSY----VVSAGQTLYLAGQVALDKNGLIVGTTMQEQATQVWQNIKIALNAVGSDLENIVKINYFLRDIRELNDEIEIRKTLFKPNKFPAVTAVQAAALGLPGLLLEVDI-VAVSN 142          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A895YBK2 (Uncharacterized protein n=1 Tax=Micromonosporaceae bacterium DSM 106523 TaxID=2811111 RepID=A0A895YBK2_9ACTN)

HSP 1 Score: 70.5 bits (171), Expect = 2.100e-11
Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 0
Query:   35 INPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS--PVATLVSTGSLALDGLLVEIE 153
            +NP  L DP+ FGY+HI       +A IAGQ A   TG ++    A Q+ +   N+  A+ A   ++SD+ +L  +I++ +P+  + +        G   P  TL+   SLAL G+L E++
Sbjct:  147 VNPAQLHDPTGFGYSHIARSTGTEIALIAGQYAAGPTGELVATDFAGQVAQAFANLATAIAAAGLELSDVAQLRTYIVDHEPAKLAVIVEHVQRLWGDRPPAQTLLGVASLALPGMLFEVD 267          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A7W9WDW1 (Enamine deaminase RidA (YjgF/YER057c/UK114 family) n=20 Tax=Streptomyces TaxID=1883 RepID=A0A7W9WDW1_9ACTN)

HSP 1 Score: 67.4 bits (163), Expect = 3.520e-11
Identity = 49/131 (37.40%), Postives = 64/131 (48.85%), Query Frame = 0
Query:   36 NPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGS-IIGDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS--PVATLVSTGSLALDGLLVEIELDVAVSHPFV 163
            NPPTL DP+PFGY+H  V        I GQ A + TG+ + GD  A+  L  +R +  A+E V      ++RL  FI++ DP     L      R G   P  TL    SLAL G+L E+  D     P V
Sbjct:   10 NPPTLHDPTPFGYSH-AVSAPGETVFIGGQYASDATGAPVAGDFAAQVELAFDR-LRSALEGVGLGYEHVVRLGTFIVDHDPGRLEILGKALHARFGERLPAQTLSGVASLALQGMLFEV--DAVAMRPAV 136          
BLAST of Ggra8917.t1 vs. uniprot
Match: A0A1C2DJV4 (Enamine deaminase RidA n=5 Tax=Mesorhizobium TaxID=68287 RepID=A0A1C2DJV4_9HYPH)

HSP 1 Score: 67.0 bits (162), Expect = 4.220e-11
Identity = 40/128 (31.25%), Postives = 65/128 (50.78%), Query Frame = 0
Query:   35 INPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSIIGD-TLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLG--SPVA-TLVSTGSLALDGLLVEIELDVAV 158
            INP +++   PFG++H          H+AGQVA N  G ++G   LA Q  +   N+   +  V +  +D++RL  +++N  P    P+  E     G  +P A TL+   +LA+   L+EIE   A+
Sbjct:    6 INPDSMYQSLPFGFSHAVEQNSGRTLHLAGQVAWNSAGELVGPGDLATQARQALANLKAVLAEVGAMPADVVRLRTYVVNHTPDKLGPITAEIAAFFGDAAPAANTLIGVQTLAMPEFLIEIEATAAL 133          
BLAST of Ggra8917.t1 vs. uniprot
Match: RidA family protein n=1 Tax=Streptomyces griseus TaxID=1911 RepID=UPI00056578E5 (RidA family protein n=1 Tax=Streptomyces griseus TaxID=1911 RepID=UPI00056578E5)

HSP 1 Score: 67.0 bits (162), Expect = 5.050e-11
Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   31 RLVTINPPTLFDPSPFGYAHITVDRKNAVAHIAGQVAINQTGSII-GDTLAEQLLETERNIMLAMEAVESDISDILRLNGFILNLDPSTDSPLFMETGMRLGS--PVATLVSTGSLALDGLLVEIE 153
            R +T NPPTL DP+PFGY+H  V     +  IAGQ A + TG+ + GD  A+  L  ER +  A+ AV      ++RL  F+++ D +    L      R G   P  TL    SLAL G+L E++
Sbjct:    6 RTIT-NPPTLHDPTPFGYSH-AVSAPGELVFIAGQYASDATGAPVPGDFAAQVELAFER-LRAALGAVGLGFEHVVRLGSFVVDHDSAKLEVLGKALHARFGDRLPAQTLSGVASLALPGMLFEVD 128          
The following BLAST results are available for this feature:
BLAST of Ggra8917.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4H83.390e-6967.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IR416.870e-4853.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7M3M6S73.270e-1434.68Endoribonuclease L-PSP n=2 Tax=Streptomyces sp. SA... [more]
A0A829YFH33.510e-1433.59Enamine deaminase RidA n=3 Tax=Steroidobacter TaxI... [more]
RidA family protein n=1 Tax=Psychrobacter fulvigenes TaxID=533323 RepID=UPI00191835231.890e-1332.56RidA family protein n=1 Tax=Psychrobacter fulvigen... [more]
A0A6I3BB389.950e-1234.65Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A895YBK22.100e-1132.23Uncharacterized protein n=1 Tax=Micromonosporaceae... [more]
A0A7W9WDW13.520e-1137.40Enamine deaminase RidA (YjgF/YER057c/UK114 family)... [more]
A0A1C2DJV44.220e-1131.25Enamine deaminase RidA n=5 Tax=Mesorhizobium TaxID... [more]
RidA family protein n=1 Tax=Streptomyces griseus TaxID=1911 RepID=UPI00056578E55.050e-1138.10RidA family protein n=1 Tax=Streptomyces griseus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 31..160
e-value: 9.6E-13
score: 50.0
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 34..158
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 48..157
e-value: 3.0E-11
score: 43.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availableCDDcd00448YjgF_YER057c_UK114_familycoord: 48..153
e-value: 5.35636E-10
score: 52.1755

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:799026..799550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8917.t1Ggra8917.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 799026..799550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8917.t1 ID=Ggra8917.t1|Name=Ggra8917.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MHFRTLLHFLALTLLLQTVQAFFCTGRGGPRLVTINPPTLFDPSPFGYAH
ITVDRKNAVAHIAGQVAINQTGSIIGDTLAEQLLETERNIMLAMEAVESD
ISDILRLNGFILNLDPSTDSPLFMETGMRLGSPVATLVSTGSLALDGLLV
EIELDVAVSHPFVRRLVCKKNDSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf
IPR006175YjgF/YER057c/UK114