Ggra8893.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8893.t1
Unique NameGgra8893.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length145
Homology
BLAST of Ggra8893.t1 vs. uniprot
Match: A0A2V3J7V2 (Cupin_3 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7V2_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 6.070e-65
Identity = 97/144 (67.36%), Postives = 115/144 (79.86%), Query Frame = 0
Query:    1 MAFVAAPAALSNKVRKKLVSAQKPQRFVRAKRAAFVHTPAVMSAQVVEKGAGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVFGVKL 144
            MAFV  PA     V+ +   A++ +  V ++ A      A++ + VVEKGAGMR+IK AD  TIE+LGCRSWGTWGCEPSTFPWTY+DDEVCL+LKGD TVIPDDGSEKMD++AGDIAYFPKNMSCTWEVREAVHKHF FG+K+
Sbjct:    1 MAFVLEPAIWRKDVQSQFTCARQSKPLVSSQAAR----RAIVMSTVVEKGAGMRVIKNADEATIEKLGCRSWGTWGCEPSTFPWTYADDEVCLLLKGDLTVIPDDGSEKMDLQAGDIAYFPKNMSCTWEVREAVHKHFTFGIKI 140          
BLAST of Ggra8893.t1 vs. uniprot
Match: R7Q4G6 (Cupin_3 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4G6_CHOCR)

HSP 1 Score: 169 bits (428), Expect = 1.560e-51
Identity = 88/146 (60.27%), Postives = 100/146 (68.49%), Query Frame = 0
Query:    1 MAFVAAPAALSNKVRKKLVSAQKPQRFVRAKRAAFVHTPAVMSAQ--VVEKGAGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVFGVKL 144
            MAFV +P     +     VS QK  RFV A        PA MS Q   +EKG GM++IK AD   I  LGCRSW  WGCEPSTF WTYSDDE+CLVL+GDFTV P DGS+ MDV+AGDIA+FPK MSC WEVR+AV KHF+FG  L
Sbjct:    1 MAFVLSPGVAPRRFSVS-VSPQKNTRFVLAN----ARQPARMSVQEKAIEKGGGMKVIKAADENVIAELGCRSWDKWGCEPSTFDWTYSDDEICLVLEGDFTVKPADGSDSMDVQAGDIAFFPKGMSCVWEVRKAVDKHFLFGKSL 141          
BLAST of Ggra8893.t1 vs. uniprot
Match: A0A6P6UXR3 (uncharacterized protein LOC113714620 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6UXR3_COFAR)

HSP 1 Score: 115 bits (287), Expect = 1.870e-29
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0
Query:   34 AFVHTPAVMSAQVVEKGAGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            A   TP  M+  V+EK +G+++IK      +  LG R+W  WGC PS FPWTYS  E C +LKG   V PD   E +++ AGD+  FPK MSCTW+V EAV KH+ F
Sbjct:   92 AEAETPIPMATSVIEK-SGIKIIKSPPESRLSDLGVRTWPKWGCPPSKFPWTYSSKETCYLLKGKVKVYPDGSEEVVEIGAGDLVEFPKGMSCTWDVSEAVDKHYNF 197          
BLAST of Ggra8893.t1 vs. uniprot
Match: uncharacterized protein LOC121781674 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27E4D6 (uncharacterized protein LOC121781674 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27E4D6)

HSP 1 Score: 112 bits (281), Expect = 6.190e-29
Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 0
Query:   26 RFVRAKRAAFVHTPAVMSAQVVEKGAGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            R ++A+  A      V+ A   EK  G++++K      +  LG RSW  WGC PS FPWTYS  E C +LKG   V PD   E +++ AGD+  FPK MSCTW+V EAV KH++F
Sbjct:   51 RAIKARAGASPRQLKVIMATETEK-LGIKIVKNPPESKLSELGVRSWPKWGCPPSNFPWTYSAKETCYLLKGKVKVYPDGSKEAVEIGAGDLVVFPKGMSCTWDVSEAVDKHYLF 164          
BLAST of Ggra8893.t1 vs. uniprot
Match: A0A2C9U4P5 (Cupin_3 domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9U4P5_MANES)

HSP 1 Score: 109 bits (272), Expect = 5.000e-28
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   44 AQVVEKGAGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            A  +EK +G+++++      +  LG RSW  WGC PS FPWTYSD E+C +LKG+  V PD   E +++ AGD+  FPK MSCTW+V   V KH+ F
Sbjct:   32 AIAIEK-SGVKIVRNPPESKLTELGVRSWPKWGCPPSKFPWTYSDKEICYLLKGEVKVYPDGSDEAVEIGAGDLVEFPKGMSCTWDVSVGVDKHYKF 127          
BLAST of Ggra8893.t1 vs. uniprot
Match: A0A6I9UKP7 (uncharacterized protein LOC105174565 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UKP7_SESIN)

HSP 1 Score: 108 bits (269), Expect = 4.100e-27
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   52 GMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            G++++K      +  LG RSW  WGC PS FPWTYS  E C +L+G+  V PD   E + + AGD+  FPK MSCTW+V EAV KH+ F
Sbjct:   77 GIKIVKSPPESKLSELGVRSWPKWGCPPSKFPWTYSSKETCYLLEGNVKVYPDGSDEAVQIVAGDLVVFPKGMSCTWDVSEAVDKHYKF 165          
BLAST of Ggra8893.t1 vs. uniprot
Match: uncharacterized protein LOC111389540 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CCF56 (uncharacterized protein LOC111389540 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CCF56)

HSP 1 Score: 105 bits (261), Expect = 8.730e-27
Identity = 45/90 (50.00%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   51 AGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            +G+++IK      +  LG RSW  WGC PS FPWTYS  E C +LKG   V PD   E +    GD+  FPK MSCTW+V EAV KH++F
Sbjct:    4 SGIKVIKNPPESKLSELGVRSWPKWGCPPSKFPWTYSSKETCYLLKGKVKVHPDGSDEAVVFGVGDLVEFPKGMSCTWDVAEAVDKHYMF 93          
BLAST of Ggra8893.t1 vs. uniprot
Match: D8LS16 (Hypothetical conserved protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS16_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.030e-26
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0
Query:   53 MRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            +++ K    E I+ LG RSW TWGC  S FPWTY   E CL+L+GD TV PDD  + ++V  GD+  FP  MSCTW+VR  V KH+ F
Sbjct:   61 IKVTKDPSEEEIKALGARSWPTWGCGVSKFPWTYEGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMSCTWDVRAPVKKHYKF 148          
BLAST of Ggra8893.t1 vs. uniprot
Match: A0A022Q617 (Cupin_3 domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q617_ERYGU)

HSP 1 Score: 105 bits (263), Expect = 1.440e-26
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   51 AGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVF 140
            + ++++K     T+  LG RSW  WGC PS FPWTYS  E C +L+G   V PDDG E +++ AGD+  FPK M+CTW+V +AV KH+ F
Sbjct:   47 SSIKIVKNPPESTLSELGVRSWPKWGCPPSKFPWTYSSRETCYLLEGKVKVYPDDG-EAVEIGAGDMVVFPKGMTCTWDVSQAVDKHYKF 135          
BLAST of Ggra8893.t1 vs. uniprot
Match: A0A6J1DS18 (uncharacterized protein LOC111023000 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DS18_MOMCH)

HSP 1 Score: 105 bits (262), Expect = 2.160e-26
Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   41 VMSAQVVEKGAGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFTVIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVFG 141
            V +  +  +  G+++ K      + +LG R W  WGCEPS FPWTYSD E C +L+G   V P    E +++ +GD+  FPK MSCTW+V  AV KH+ FG
Sbjct:   38 VRAESMATEKLGIKIEKNPPESKLTQLGVRQWPKWGCEPSKFPWTYSDKETCFLLEGKVKVTPAGSEESVEIGSGDLVVFPKGMSCTWDVSVAVDKHYNFG 138          
The following BLAST results are available for this feature:
BLAST of Ggra8893.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7V26.070e-6567.36Cupin_3 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q4G61.560e-5160.27Cupin_3 domain-containing protein n=1 Tax=Chondrus... [more]
A0A6P6UXR31.870e-2948.60uncharacterized protein LOC113714620 n=3 Tax=Coffe... [more]
uncharacterized protein LOC121781674 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27E4D66.190e-2945.22uncharacterized protein LOC121781674 n=1 Tax=Salvi... [more]
A0A2C9U4P55.000e-2847.42Cupin_3 domain-containing protein n=1 Tax=Manihot ... [more]
A0A6I9UKP74.100e-2749.44uncharacterized protein LOC105174565 n=1 Tax=Sesam... [more]
uncharacterized protein LOC111389540 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CCF568.730e-2750.00uncharacterized protein LOC111389540 n=1 Tax=Olea ... [more]
D8LS161.030e-2651.14Hypothetical conserved protein n=1 Tax=Ectocarpus ... [more]
A0A022Q6171.440e-2648.89Cupin_3 domain-containing protein n=1 Tax=Erythran... [more]
A0A6J1DS182.160e-2643.56uncharacterized protein LOC111023000 n=1 Tax=Momor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 44..140
e-value: 1.1E-29
score: 104.0
IPR008579(S)-ureidoglycine aminohydrolase, cupin domainPFAMPF05899Cupin_3coord: 65..138
e-value: 1.7E-25
score: 88.5
NoneNo IPR availablePANTHERPTHR33271:SF22OS04G0445200 PROTEINcoord: 36..140
NoneNo IPR availablePANTHERPTHR33271OS04G0445200 PROTEINcoord: 36..140
NoneNo IPR availableCDDcd02227cupin_TM1112-likecoord: 71..140
e-value: 3.93683E-33
score: 109.592
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 56..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:671134..671647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8893.t1Ggra8893.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 671134..671647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8893.t1 ID=Ggra8893.t1|Name=Ggra8893.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=145bp
MAFVAAPAALSNKVRKKLVSAQKPQRFVRAKRAAFVHTPAVMSAQVVEKG
AGMRLIKKADNETIERLGCRSWGTWGCEPSTFPWTYSDDEVCLVLKGDFT
VIPDDGSEKMDVKAGDIAYFPKNMSCTWEVREAVHKHFVFGVKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR008579UGlyAH_Cupin_dom
IPR011051RmlC_Cupin_sf