Ggra8885.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8885.t1
Unique Name	Ggra8885.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	104

Homology

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A5J4YUW1 (Histone H4 n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUW1_PORPP)

HSP 1 Score: 190 bits (482), Expect = 1.540e-60
Identity = 97/103 (94.17%), Postives = 102/103 (99.03%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFGS 103
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLES+IRDAVTYTEHARRKTV +MDV+YALKRQGRTLYGFG+
Sbjct:   33 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESIIRDAVTYTEHARRKTVTAMDVIYALKRQGRTLYGFGT 135

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A7S4DKQ9 (Histone H4 n=6 Tax=Chlorarachniophyceae TaxID=29197 RepID=A0A7S4DKQ9_9EUKA)

HSP 1 Score: 189 bits (480), Expect = 1.580e-60
Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLESVIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:   13 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLESVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 114

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A6P7NCJ4 (Histone H4 n=3 Tax=Anabantaria TaxID=1489892 RepID=A0A6P7NCJ4_BETSP)

HSP 1 Score: 188 bits (478), Expect = 2.180e-60
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFGS 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHA+RKTV +MDVVYALKRQGRTLYGFGS
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGS 103

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: C1MUM2 (Histone H4 n=19 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 188 bits (477), Expect = 3.100e-60
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A4QN89 (Histone H4 n=10 Tax=Bilateria TaxID=33213 RepID=A4QN89_DANRE)

HSP 1 Score: 188 bits (477), Expect = 3.100e-60
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHA+RKTV++MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVIAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A7S3RVL2 (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 188 bits (477), Expect = 3.200e-60
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A4Y7JY77 (Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A4Y7JY77_PAPSO)

HSP 1 Score: 188 bits (477), Expect = 4.390e-60
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFGS 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG+
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGA 103

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: H4 (Histone H4 n=270 Tax=Eukaryota TaxID=2759 RepID=H4_ARATH)

HSP 1 Score: 187 bits (476), Expect = 4.400e-60
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A2U1J020 (Histone H4 n=36 Tax=cellular organisms TaxID=131567 RepID=A0A2U1J020_SMIAN)

HSP 1 Score: 187 bits (476), Expect = 4.400e-60
Identity = 95/102 (93.14%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRK+LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNV+K+FLE+VIRDAVTYTEHA+RKTV S+DVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVIKIFLENVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFG 102

[Close]

BLAST of Ggra8885.t1 vs. uniprot
Match: A0A0D2MLB1 (Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0D2MLB1_9CHLO)

HSP 1 Score: 187 bits (476), Expect = 4.400e-60
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+V+RDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

The following BLAST results are available for this feature:

BLAST of Ggra8885.t1 vs. uniprot

BLAST of Ggra8885.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5J4YUW1	1.540e-60	94.17	Histone H4 n=2 Tax=Porphyridium purpureum TaxID=35...	[more]
A0A7S4DKQ9	1.580e-60	97.06	Histone H4 n=6 Tax=Chlorarachniophyceae TaxID=2919...	[more]
A0A6P7NCJ4	2.180e-60	95.15	Histone H4 n=3 Tax=Anabantaria TaxID=1489892 RepID...	[more]
C1MUM2	3.100e-60	96.08	Histone H4 n=19 Tax=Eukaryota TaxID=2759 RepID=C1M...	[more]
A4QN89	3.100e-60	95.10	Histone H4 n=10 Tax=Bilateria TaxID=33213 RepID=A4...	[more]
A0A7S3RVL2	3.200e-60	96.08	Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re...	[more]
A0A4Y7JY77	4.390e-60	94.17	Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 R...	[more]
H4	4.400e-60	95.10	Histone H4 n=270 Tax=Eukaryota TaxID=2759 RepID=H4...	[more]
A0A2U1J020	4.400e-60	93.14	Histone H4 n=36 Tax=cellular organisms TaxID=13156...	[more]
A0A0D2MLB1	4.400e-60	95.10	Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 62..76 score: 90.2 coord: 89..100 score: 97.79 coord: 5..16 score: 95.59 coord: 77..89 score: 77.38 coord: 40..60 score: 90.62 coord: 20..39 score: 93.38
IPR001951	Histone H4	SMART	SM00417	h44	coord: 16..90 e-value: 2.9E-27 score: 106.6
IPR001951	Histone H4	CDD	cd00076	H4	coord: 18..101 e-value: 7.67183E-42 score: 130.314
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 34..96 e-value: 4.6E-8 score: 33.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..103 e-value: 2.8E-56 score: 189.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..102
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 1..102
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 15..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000860_pilon	contig	tig00000860_pilon:648481..648909 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8885.t1	Ggra8885.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000860_pilon 648481..648909 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8885.t1 ID=Ggra8885.t1|Name=Ggra8885.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=104bp
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYG
FGS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR035425	CENP-T/H4_C
IPR009072	Histone-fold
IPR019809	Histone_H4_CS