Ggra8880.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8880.t1
Unique NameGgra8880.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length218
Homology
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A2V3J5D8 (Corrinoid adenosyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5D8_9FLOR)

HSP 1 Score: 316 bits (809), Expect = 3.420e-107
Identity = 157/216 (72.69%), Postives = 179/216 (82.87%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCH-PSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWRENRSALNDVANMHAP 215
            MKIYTR+GD+GETSLFNGSRVPKDH+LV AYGIVDECNAAIGLA +HLQT  P+   +   H  S++ +LIARLQLVQNFLFDLGA+LATPR KS +FK+ RTEF E A   LE WIDDMDSKLP L TFLLPGGHPASASLH+ RTIARRAER +TPLY  +  EIE +AYRFLNRLSDFLFVASRMAN IV+  DVKW++NR+ALND+A+   P
Sbjct:    1 MKIYTRTGDKGETSLFNGSRVPKDHILVNAYGIVDECNAAIGLATAHLQTSPPTNAEDTASHFVSQKPVLIARLQLVQNFLFDLGAHLATPRTKSSSFKIARTEFAESAVQKLEAWIDDMDSKLPQLTTFLLPGGHPASASLHMARTIARRAERAITPLYRAEEEEIEASAYRFLNRLSDFLFVASRMANCIVAATDVKWQDNRAALNDIASGCCP 216          
BLAST of Ggra8880.t1 vs. uniprot
Match: R7Q991 (Corrinoid adenosyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q991_CHOCR)

HSP 1 Score: 245 bits (625), Expect = 4.440e-79
Identity = 120/205 (58.54%), Postives = 156/205 (76.10%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWRENRSA 205
            MK+YTR+GD G+TSLFNG+RV K+H L+ AYG VDECNAAIGLA SHL +   +   E+    SERK++++RL  +QN+LFDLGA+LATPR  S   K+ RT+F   A++ LE WID MD  L  L TF+LPGGHP++A+LHL RTIARRAER +TPL+V   +EI+ +A++F+NRLSD+LFVASR AN+I+ VQDV W +   A
Sbjct:    1 MKVYTRTGDTGKTSLFNGARVAKNHALIDAYGTVDECNAAIGLACSHLAS-PNAHLAENTESDSERKLVLSRLHTIQNYLFDLGAHLATPRSTSSDNKIARTQFSSNASTQLEEWIDAMDKDLAPLTTFVLPGGHPSAAALHLARTIARRAERAVTPLFVDGEQEIDESAFQFINRLSDYLFVASRYANQIMGVQDVTWTKGARA 204          
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A7S0G3P1 (Corrinoid adenosyltransferase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3P1_9RHOD)

HSP 1 Score: 201 bits (511), Expect = 4.140e-62
Identity = 103/202 (50.99%), Postives = 139/202 (68.81%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSER-KILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWRE 201
            MK+YT+SGD G TSLFNG RV KD++ V AYG +DECN+A+G+A S L     S       H  ER + L+ +L+ +Q+  FDLGA+LATPR +S    +++T F   A++ LE WID++  +LP L TF+LPGGHPA+A LHL RT ARRAER+ T L   +  E+E  AY FLNR+SD+ FVA+R AN I +++DV W +
Sbjct:    1 MKLYTKSGDRGTTSLFNGERVSKDNIRVTAYGTLDECNSALGVACSILSQEVRSPLASTSKHNLERLETLLNQLKYIQHRFFDLGAHLATPRVRSDESTLDKTRFEMEASNQLEEWIDELQERLPPLTTFILPGGHPAAAHLHLARTTARRAERISTALI--EEDEVEDAAYVFLNRVSDYFFVAARYANHIFNIEDVTWHK 200          
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A7X5Q8Z1 (Corrinoid adenosyltransferase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5Q8Z1_9BACT)

HSP 1 Score: 187 bits (475), Expect = 8.850e-57
Identity = 94/207 (45.41%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKI--LIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWRENRSA 205
            MKIYT++GD+GETSLF G RVPK+  L+ A G VDECN+AIG+A + L              P + K    + RL ++Q+ LFDLGA +ATPR ++   K+++T F       +E WID+MD++LP L TF+LPGGHP+SA L L R+I RRAER++ PL    H ++     ++LNRLSD+LF+ SR  N + +  + KW+ + +A
Sbjct:    1 MKIYTKTGDKGETSLFTGQRVPKNDPLIDALGTVDECNSAIGVAITLL--------------PDDAKFGTTMERLTIIQHALFDLGAAVATPRTRAANAKIDKTRFDAEEIELIEKWIDEMDNELPKLDTFILPGGHPSSAMLQLARSICRRAERLMIPL--NHHADVSDRVIKYLNRLSDYLFITSRYVNVLTNYPETKWKPHLTA 191          
BLAST of Ggra8880.t1 vs. uniprot
Match: F8LA31 (Corrinoid adenosyltransferase n=2 Tax=Waddlia chondrophila TaxID=71667 RepID=F8LA31_9BACT)

HSP 1 Score: 184 bits (467), Expect = 1.440e-55
Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 0
Query:    2 KIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWREN 202
            KIYTRSGD+GETSLF G RV K+   ++A G VDECN+ IGLA +H+   E                L  +L ++Q+ LFDLGA +ATPR ++   K+++T F E+    LE WID+MD +LP L  F+LPGGHPA A LHL R++ RRAER + PL   +H ++     R+LNRLSD+LF+ASR  N + ++ +  W+++
Sbjct:    3 KIYTRSGDKGETSLFTGERVLKNDPFIEALGTVDECNSTIGLAIAHMPDNEIYSG------------LKQQLVMIQHALFDLGAAIATPRTRAKEDKIDKTRFDEKEIEILEKWIDEMDLQLPKLKHFILPGGHPAGAMLHLARSVCRRAERQVIPL--SRHSDVSDKITRYLNRLSDYLFMASRWNNHLANMPETPWKQH 189          
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A7D5MT83 (Corrinoid adenosyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7D5MT83_9BACT)

HSP 1 Score: 184 bits (466), Expect = 1.980e-55
Identity = 96/199 (48.24%), Postives = 130/199 (65.33%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKW 199
            +KIYTRSGDEGETSLF+G RV K+   ++A G VDE N+AIG+A S +               S  K L  +L+++Q+ LFDLGA LATPR ++ T K+ERT F       LE WID+M+ KLP+L TF+LPGGH A A LHL R+I RRAER++ P  + ++ ++      +LNRLSD+LFVASR  N +    +++W
Sbjct:    4 VKIYTRSGDEGETSLFSGQRVSKNDSFIEALGTVDEVNSAIGIALSFMX--------------SSLKDLRDQLEIIQHTLFDLGASLATPRTRASTTKIERTRFDNDGTELLEKWIDEMEEKLPELHTFILPGGHSAGAFLHLARSICRRAERIVIP--ISKNPDVSKNVIMYLNRLSDYLFVASRYVNYLCQKLELQW 186          
BLAST of Ggra8880.t1 vs. uniprot
Match: cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Parachlamydia sp. C2 TaxID=1414722 RepID=UPI0008380BB5 (cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Parachlamydia sp. C2 TaxID=1414722 RepID=UPI0008380BB5)

HSP 1 Score: 183 bits (465), Expect = 4.470e-55
Identity = 93/203 (45.81%), Postives = 131/203 (64.53%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWRENR 203
            MKIYTR+GD+G+TSLF+G RV KD+  + A G +DE N+A+GLA S L    P E   +    +       +L+++Q+ LFD+GA LATPR    + K+++T F   A   LE WID+MD +LP L  F+LPGGHP  A+LHL R+I RRAER++ PLY     E+      +LNRLSD+LFV SR  N  +S+ + +W+ ++
Sbjct:    1 MKIYTRTGDKGQTSLFSGERVNKDNPFIDALGTIDEGNSALGLALSFL----PKESELNKTRKAHLNKTREQLEIIQHALFDVGAALATPRSCDESQKLQKTRFGHEATDLLEKWIDEMDGQLPPLKNFILPGGHPVGAALHLSRSIIRRAERLVIPLY--SKAEVTQDVLVYLNRLSDYLFVTSRFVNHCLSIPETEWQPHK 197          
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A7W1YVH4 (Corrinoid adenosyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YVH4_9BACT)

HSP 1 Score: 180 bits (456), Expect = 7.530e-54
Identity = 95/203 (46.80%), Postives = 129/203 (63.55%), Query Frame = 0
Query:    2 KIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWRENRS 204
            KIYTRSGD+GETSLF G R+ K    ++A G VDECN +IG+A + + T            P   K+   +L++VQ+ LFDLGA LATPR  + + KVE+T F     + LE WIDDMDSKLP+L TF+LPGGH   A LHL R+I RRAER++ P++  ++ ++      +LNRLSD+LFV SR  N +    +  W  ++S
Sbjct:    4 KIYTRSGDKGETSLFTGQRIAKSDPYMEAIGTVDECNCSIGIAVALMGT-----------QPQFVKVR-EQLEIVQHTLFDLGAALATPRTSASSSKVEKTRFDHEGTALLEQWIDDMDSKLPELHTFILPGGHACGAVLHLARSICRRAERLVLPVH--KNADVSEHVLVYLNRLSDYLFVLSRYVNSLTHSAETSWDPHKS 192          
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A5J4Z025 (Corrinoid adenosyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z025_PORPP)

HSP 1 Score: 179 bits (455), Expect = 1.250e-53
Identity = 96/205 (46.83%), Postives = 135/205 (65.85%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKIL---IARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWREN 202
            MKIYTR+GD+G TSLFNG RVPK+   V AYG VDE N+ +GLAAS L    P  D  +   P++++ L   + +++ +QN LFDLGA+LATP   S    + RT F +  +  LE W+D MD+ LP L TF++PGGH A+++LH+ RTI RRAER + PL   +  ++    Y+F+NRLSD+LF+ SR  N +   +DV W ++
Sbjct:    1 MKIYTRTGDDGTTSLFNGLRVPKNEPHVDAYGTVDELNSTLGLAASLLA---PELD-SNARTPTQKESLESSLKQIRYIQNRLFDLGAHLATPLTSSDAESIARTGFKDAVSELLEKWMDAMDADLPKLTTFIVPGGHAAASALHMARTICRRAERQMVPLL--EQGDLCGAGYKFMNRLSDYLFMVSRHVNILTGDRDVLWSKD 199          
BLAST of Ggra8880.t1 vs. uniprot
Match: A0A1M3CT36 (Corrinoid adenosyltransferase n=1 Tax=Chlamydiales bacterium 38-26 TaxID=1895743 RepID=A0A1M3CT36_9CHLA)

HSP 1 Score: 176 bits (447), Expect = 1.580e-52
Identity = 90/199 (45.23%), Postives = 125/199 (62.81%), Query Frame = 0
Query:    1 MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQTFEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVERTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARRAERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKW 199
            MKIYT++GD GET+L++G RV KD   + A G VDECN+AIG A S +++    +   D            +L+++Q+ LFDLGA LATPR ++   K+ERT F       LENWID+M+  LP+L TF+LPGGH A A LHL R+I RRAER + P  + ++ ++      +LNRLSD+LFV SR  N + +  +  W
Sbjct:    1 MKIYTKTGDSGETTLYSGQRVSKDDPFIIALGSVDECNSAIGTAVSFMRSVPSLKSTCD------------QLEIIQHTLFDLGAALATPRTRAGANKIERTRFDHEGIEQLENWIDEMEQTLPELRTFILPGGHQAGAFLHLARSICRRAEREVIP--ISKNADVSKNVTIYLNRLSDYLFVCSRYVNHLCAQPETLW 185          
The following BLAST results are available for this feature:
BLAST of Ggra8880.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5D83.420e-10772.69Corrinoid adenosyltransferase n=1 Tax=Gracilariops... [more]
R7Q9914.440e-7958.54Corrinoid adenosyltransferase n=1 Tax=Chondrus cri... [more]
A0A7S0G3P14.140e-6250.99Corrinoid adenosyltransferase n=1 Tax=Rhodosorus m... [more]
A0A7X5Q8Z18.850e-5745.41Corrinoid adenosyltransferase n=1 Tax=Chlamydiae b... [more]
F8LA311.440e-5546.27Corrinoid adenosyltransferase n=2 Tax=Waddlia chon... [more]
A0A7D5MT831.980e-5548.24Corrinoid adenosyltransferase n=1 Tax=Parachlamydi... [more]
cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Parachlamydia sp. C2 TaxID=1414722 RepID=UPI0008380BB54.470e-5545.81cob(I)yrinic acid a,c-diamide adenosyltransferase ... [more]
A0A7W1YVH47.530e-5446.80Corrinoid adenosyltransferase n=1 Tax=Parachlamydi... [more]
A0A5J4Z0251.250e-5346.83Corrinoid adenosyltransferase n=1 Tax=Porphyridium... [more]
A0A1M3CT361.580e-5245.23Corrinoid adenosyltransferase n=1 Tax=Chlamydiales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016030Cobalamin adenosyltransferase-likePFAMPF01923Cob_adeno_transcoord: 3..187
e-value: 3.7E-54
score: 183.4
IPR036451Cobalamin adenosyltransferase-like superfamilyGENE3D1.20.1200.10coord: 13..213
e-value: 1.3E-54
score: 186.2
IPR036451Cobalamin adenosyltransferase-like superfamilySUPERFAMILY89028Cobalamin adenosyltransferase-likecoord: 1..200
IPR029499ATP:cob(I)alamin adenosyltransferase, PduO-typeTIGRFAMTIGR00636TIGR00636coord: 4..199
e-value: 1.3E-45
score: 153.1
IPR029499ATP:cob(I)alamin adenosyltransferase, PduO-typePANTHERPTHR12213CORRINOID ADENOSYLTRANSFERASEcoord: 2..204
NoneNo IPR availablePANTHERPTHR12213:SF0CORRINOID ADENOSYLTRANSFERASEcoord: 2..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:632734..633466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8880.t1Ggra8880.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 632734..633466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8880.t1 ID=Ggra8880.t1|Name=Ggra8880.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=218bp
MKIYTRSGDEGETSLFNGSRVPKDHVLVQAYGIVDECNAAIGLAASHLQT
FEPSEDHEDLCHPSERKILIARLQLVQNFLFDLGAYLATPRKKSPTFKVE
RTEFPERAASDLENWIDDMDSKLPDLATFLLPGGHPASASLHLGRTIARR
AERMLTPLYVGQHREIEPTAYRFLNRLSDFLFVASRMANKIVSVQDVKWR
ENRSALNDVANMHAPLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016030CblAdoTrfase-like
IPR036451CblAdoTrfase-like_sf
IPR029499PduO-typ