Ggra8867.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8867.t1
Unique NameGgra8867.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length511
Homology
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BLAST of Ggra8867.t1 vs. uniprot
Match: S0F323 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F323_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 8.280e-22
Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:   22 PLTGRTSYRWSNFSEKPIGSNLSVADITGSRSTIASFRPDAPGYYSLNLAVKGHGVTYSDPINIFVYDLDDLQQVTAAQSLAASVEQQYYVIGCHFAKPAVEPND 126
            PL GRTSYRWS F E+P G  L+VADI GSRST A F+PDAPG Y+LNL+VKGHG TY+D I + V D+DD +     +S    ++Q ++VIGC F+  + +  D
Sbjct:   40 PLMGRTSYRWS-FLEEPQGCKLTVADIQGSRSTTAWFKPDAPGPYTLNLSVKGHGATYADAIKLRVVDVDDEKDAHLLKS--DDLDQDFFVIGCKFSDKSDKQQD 141
The following BLAST results are available for this feature:
BLAST of Ggra8867.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
S0F3238.280e-2253.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 355..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:577978..579510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8867.t1Ggra8867.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 577978..579510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8867.t1 ID=Ggra8867.t1|Name=Ggra8867.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=511bp
MDLNVEAANHHFQTSPKKNPQPLTGRTSYRWSNFSEKPIGSNLSVADITG
SRSTIASFRPDAPGYYSLNLAVKGHGVTYSDPINIFVYDLDDLQQVTAAQ
SLAASVEQQYYVIGCHFAKPAVEPNDTSHSPSKRKMDIANLSSSSAIPTR
GASSQPSTASANPSIGGNLFRPPWKRTKLSAADSNSNNGHELPAAAHPRT
MALASGKPSITPADYDDNDDEDDDNAHDDDDDDDDAVIGGGGGYEDDDDE
DLEGLESGDDDDDEHLGEGGGDDADDGANDDGDQGGDDDDEGGDDDEGGD
DDGNQGEEQEDEEGSDDDENQEEIEIDEEEEDISSDVDIDGAEEAEPTHT
SQQREEPEEEDADEMRRDVQEEEEEEDEEEDTGMYDDGDDPQQDEDVDDD
EEDDAEDDDEGGGGDEDGEEEIEVDDDQEEPKNITQEDDDDDDDDDDDED
DDDDDDDDDDEMMEEQEVQDAFPSGGIEQERDGDNQEDDNVGENVEFEDV
EIENDDDGDE*
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