Ggra8829.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8829.t1
Unique Name	Ggra8829.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	176

Homology

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BLAST of Ggra8829.t1 vs. uniprot
Match: A0A2V3J4Q5 (Two-component response regulator-like PRR37 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Q5_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 8.050e-31
Identity = 80/164 (48.78%), Postives = 101/164 (61.59%), Query Frame = 0

Query:    2 SVTSFTSQLERAVIKSSFQSLFSPHP-DNVSATTALFSRKPTFGLTPFANATTTPGLVHPSPSLLPIFTP-AVHNAAIPSPNGTDPMQITPYLAAAGRKAVCGEFMNMPSYAAPGANPHQPSHVAAERKVPDRTPSPNYSMPVVANTGVQVEHITPRNRSIDVT 163
            S T F +QL+R  IK+SFQSLFSP P  NV+AT AL SR    GLTPF NAT TPGLV P  +LLP F+   +      SPN ++  Q TPYL AA ++AV  EFM+MPSY A    P      + ER+VP++  SP YS+ VV  TG QV    P++ +  +T
Sbjct:   71 SSTPFINQLDRTGIKNSFQSLFSPSPGSNVAATPALLSRTTAPGLTPFLNATQTPGLVPPCSALLPTFSSFPLQKGVSASPNVSEQGQKTPYLTAAAKEAVRREFMSMPSYVATLPPPEARPQASTERQVPEKVASPKYSVQVVVQTGAQVPASGPQSSTTQLT 234

The following BLAST results are available for this feature:

BLAST of Ggra8829.t1 vs. uniprot

BLAST of Ggra8829.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J4Q5	8.050e-31	48.78	Two-component response regulator-like PRR37 n=1 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..175

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000860_pilon	contig	tig00000860_pilon:432012..432583 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8829.t1	Ggra8829.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000860_pilon 432012..432583 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8829.t1 ID=Ggra8829.t1|Name=Ggra8829.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bp
MSVTSFTSQLERAVIKSSFQSLFSPHPDNVSATTALFSRKPTFGLTPFAN
ATTTPGLVHPSPSLLPIFTPAVHNAAIPSPNGTDPMQITPYLAAAGRKAV
CGEFMNMPSYAAPGANPHQPSHVAAERKVPDRTPSPNYSMPVVANTGVQV
EHITPRNRSIDVTHDSDSAPEVQVH*